RNA–Protein interactions for RNA: ENST00000453858.1

SBDSP1-204, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

BASIC

Gene SBDSP1, Length 737 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-204ENST00000453858 ELMSAN1Q6PJG2 1045 aa6.25□□□□□ -1.41
SBDSP1-204ENST00000453858 C15orf39Q6ZRI6 1047 aa6.25□□□□□ -1.41
SBDSP1-204ENST00000453858 DEFB124Q8NES8 71 aa6.25□□□□□ -1.41
SBDSP1-204ENST00000453858 ST13P5Q8NFI4 369 aaPredicted RBP6.25□□□□□ -1.41
SBDSP1-204ENST00000453858 ATP6V0A1Q93050 837 aa6.25□□□□□ -1.41
SBDSP1-204ENST00000453858 TSR2Q969E8 191 aaKnown RBP6.25□□□□□ -1.41
SBDSP1-204ENST00000453858 DYNLL2Q96FJ2 89 aa6.25□□□□□ -1.41
SBDSP1-204ENST00000453858 BTBD6Q96KE9 485 aa6.25□□□□□ -1.41
SBDSP1-204ENST00000453858 C16orf70Q9BSU1 422 aa6.25□□□□□ -1.41
SBDSP1-204ENST00000453858 RHOBTB2Q9BYZ6 727 aa6.25□□□□□ -1.41
SBDSP1-204ENST00000453858 AGO3Q9H9G7 860 aaKnown RBP6.25□□□□□ -1.41
SBDSP1-204ENST00000453858 ENTPD7Q9NQZ7 604 aa6.25□□□□□ -1.41
SBDSP1-204ENST00000453858 ANKMY1Q9P2S6 941 aa6.25□□□□□ -1.41
SBDSP1-204ENST00000453858 PUF60Q9UHX1 559 aaKnown RBP6.25□□□□□ -1.41
SBDSP1-204ENST00000453858 PCDHGA5Q9Y5G8 931 aa6.25□□□□□ -1.41
SBDSP1-204ENST00000453858 CSMD2Q7Z408 3487 aa6.24□□□□□ -1.41
SBDSP1-204ENST00000453858 SPAARA0A1B0GVQ0 90 aa6.24□□□□□ -1.41
SBDSP1-204ENST00000453858 B8ZZF3 427 aa6.24□□□□□ -1.41
SBDSP1-204ENST00000453858 H0Y626 953 aa6.24□□□□□ -1.41
SBDSP1-204ENST00000453858 RGS9O75916 674 aaPredicted RBP6.24□□□□□ -1.41
SBDSP1-204ENST00000453858 SMNDC1O75940 238 aaKnown RBP eCLIP6.24□□□□□ -1.41
SBDSP1-204ENST00000453858 TRIM16O95361 564 aa6.24□□□□□ -1.41
SBDSP1-204ENST00000453858 ZNF286BP0CG31 522 aa6.24□□□□□ -1.41
SBDSP1-204ENST00000453858 GHRP10912 638 aa6.24□□□□□ -1.41
SBDSP1-204ENST00000453858 HOXA6P31267 233 aa6.24□□□□□ -1.41
SBDSP1-204ENST00000453858 SATB1Q01826 763 aa6.24□□□□□ -1.41
SBDSP1-204ENST00000453858 SERINC3Q13530 473 aa6.24□□□□□ -1.41
SBDSP1-204ENST00000453858 SMC1AQ14683 1233 aaKnown RBP6.24□□□□□ -1.41
SBDSP1-204ENST00000453858 LYPD4Q6UWN0 246 aa6.24□□□□□ -1.41
SBDSP1-204ENST00000453858 LRRC55Q6ZSA7 311 aa6.24□□□□□ -1.41
SBDSP1-204ENST00000453858 PIP4P1Q86T03 277 aa6.24□□□□□ -1.41
SBDSP1-204ENST00000453858 LONP2Q86WA8 852 aa6.24□□□□□ -1.41
SBDSP1-204ENST00000453858 THNSL1Q8IYQ7 743 aa6.24□□□□□ -1.41
SBDSP1-204ENST00000453858 MIGA1Q8NAN2 632 aa6.24□□□□□ -1.41
SBDSP1-204ENST00000453858 CCDC17Q96LX7 622 aa6.24□□□□□ -1.41
SBDSP1-204ENST00000453858 NSUN5Q96P11 429 aaKnown RBP6.24□□□□□ -1.41
SBDSP1-204ENST00000453858 RIOK1Q9BRS2 568 aaKnown RBP6.24□□□□□ -1.41
SBDSP1-204ENST00000453858 KATNAL1Q9BW62 490 aa6.24□□□□□ -1.41
SBDSP1-204ENST00000453858 CCDC8Q9H0W5 538 aaPredicted RBP6.24□□□□□ -1.41
SBDSP1-204ENST00000453858 RNPEPQ9H4A4 650 aa6.24□□□□□ -1.41
SBDSP1-204ENST00000453858 VPS45Q9NRW7 570 aa6.24□□□□□ -1.41
SBDSP1-204ENST00000453858 HSPBP1Q9NZL4 362 aa6.24□□□□□ -1.41
SBDSP1-204ENST00000453858 ADD3Q9UEY8 706 aaKnown RBP6.24□□□□□ -1.41
SBDSP1-204ENST00000453858 FEM1BQ9UK73 627 aa6.24□□□□□ -1.41
SBDSP1-204ENST00000453858 IRAK3Q9Y616 596 aa6.24□□□□□ -1.41
SBDSP1-204ENST00000453858 NUMBLQ9Y6R0 609 aa6.24□□□□□ -1.41
SBDSP1-204ENST00000453858 APCP25054 2843 aa6.24□□□□□ -1.41
SBDSP1-204ENST00000453858 CACNA1DQ01668 2161 aa6.24□□□□□ -1.41
SBDSP1-204ENST00000453858 COL5A1P20908 1838 aaPredicted RBP6.23□□□□□ -1.41
SBDSP1-204ENST00000453858 LNP1A1A4G5 178 aa6.23□□□□□ -1.41
SBDSP1-204ENST00000453858 NCAM2O15394 837 aa6.23□□□□□ -1.41
SBDSP1-204ENST00000453858 EIF4EBP3O60516 100 aaPredicted RBP6.23□□□□□ -1.41
SBDSP1-204ENST00000453858 PPFIA4O75335 1185 aa6.23□□□□□ -1.41
SBDSP1-204ENST00000453858 PAPSS2O95340 614 aaPredicted RBP6.23□□□□□ -1.41
SBDSP1-204ENST00000453858 CXCL14O95715 111 aa6.23□□□□□ -1.41
SBDSP1-204ENST00000453858 GH1P01241 217 aa6.23□□□□□ -1.41
SBDSP1-204ENST00000453858 POLR3DP05423 398 aaPredicted RBP6.23□□□□□ -1.41
SBDSP1-204ENST00000453858 CPB1P15086 417 aa6.23□□□□□ -1.41
SBDSP1-204ENST00000453858 EIF2AK2P19525 551 aaKnown RBP6.23□□□□□ -1.41
SBDSP1-204ENST00000453858 CYP7A1P22680 504 aa6.23□□□□□ -1.41
SBDSP1-204ENST00000453858 CALD1Q05682 793 aaKnown RBP6.23□□□□□ -1.41
SBDSP1-204ENST00000453858 FBXO47Q5MNV8 452 aa6.23□□□□□ -1.41
SBDSP1-204ENST00000453858 FAM102BQ5T8I3 360 aa6.23□□□□□ -1.41
SBDSP1-204ENST00000453858 CABP7Q86V35 215 aa6.23□□□□□ -1.41
SBDSP1-204ENST00000453858 DHX37Q8IY37 1157 aaKnown RBP6.23□□□□□ -1.41
SBDSP1-204ENST00000453858 TMEM102Q8N9M5 508 aaPredicted RBP6.23□□□□□ -1.41
SBDSP1-204ENST00000453858 CMASQ8NFW8 434 aaPredicted RBP6.23□□□□□ -1.41
SBDSP1-204ENST00000453858 PPTC7Q8NI37 304 aa6.23□□□□□ -1.41
SBDSP1-204ENST00000453858 FGF14Q92915 247 aa6.23□□□□□ -1.41
SBDSP1-204ENST00000453858 PLD4Q96BZ4 506 aa6.23□□□□□ -1.41
SBDSP1-204ENST00000453858 ZC3H10Q96K80 434 aaKnown RBP6.23□□□□□ -1.41
SBDSP1-204ENST00000453858 EDEM2Q9BV94 578 aa6.23□□□□□ -1.41
SBDSP1-204ENST00000453858 USP26Q9BXU7 913 aa6.23□□□□□ -1.41
SBDSP1-204ENST00000453858 SUV39H2Q9H5I1 410 aa6.23□□□□□ -1.41
SBDSP1-204ENST00000453858 SFXN1Q9H9B4 322 aa6.23□□□□□ -1.41
SBDSP1-204ENST00000453858 PIH1D3Q9NQM4 214 aaKnown RBP6.23□□□□□ -1.41
SBDSP1-204ENST00000453858 KANSL3Q9P2N6 904 aa6.23□□□□□ -1.41
SBDSP1-204ENST00000453858 SWAP70Q9UH65 585 aa6.23□□□□□ -1.41
SBDSP1-204ENST00000453858 IL17BQ9UHF5 180 aa6.23□□□□□ -1.41
SBDSP1-204ENST00000453858 PA2G4Q9UQ80 394 aaKnown RBP6.23□□□□□ -1.41
SBDSP1-204ENST00000453858 FNDC1Q4ZHG4 1894 aaPredicted RBP6.23□□□□□ -1.41
SBDSP1-204ENST00000453858 NBASA2RRP1 2371 aa6.23□□□□□ -1.41
SBDSP1-204ENST00000453858 NRCAMQ92823 1304 aa6.23□□□□□ -1.41
SBDSP1-204ENST00000453858 MYO5AQ9Y4I1 1855 aaKnown RBP6.22□□□□□ -1.41
SBDSP1-204ENST00000453858 A0A1B0GTL3 188 aa6.22□□□□□ -1.41
SBDSP1-204ENST00000453858 C17orf102A2RUQ5 167 aa6.22□□□□□ -1.41
SBDSP1-204ENST00000453858 J3QW42 95 aa6.22□□□□□ -1.41
SBDSP1-204ENST00000453858 STAG3L1P0CL83 205 aa6.22□□□□□ -1.41
SBDSP1-204ENST00000453858 ALAS1P13196 640 aa6.22□□□□□ -1.41
SBDSP1-204ENST00000453858 AMPD1P23109 780 aa6.22□□□□□ -1.41
SBDSP1-204ENST00000453858 GNA15P30679 374 aa6.22□□□□□ -1.41
SBDSP1-204ENST00000453858 GBP2P32456 591 aaPredicted RBP6.22□□□□□ -1.41
SBDSP1-204ENST00000453858 MPLP40238 635 aa6.22□□□□□ -1.41
SBDSP1-204ENST00000453858 CXCL12P48061 93 aa6.22□□□□□ -1.41
SBDSP1-204ENST00000453858 CDK8P49336 464 aa6.22□□□□□ -1.41
SBDSP1-204ENST00000453858 CCR3P51677 355 aa6.22□□□□□ -1.41
SBDSP1-204ENST00000453858 FAM193AP78312 1265 aa6.22□□□□□ -1.41
SBDSP1-204ENST00000453858 PERM1Q5SV97 790 aa6.22□□□□□ -1.41
SBDSP1-204ENST00000453858 PARM1Q6UWI2 310 aa6.22□□□□□ -1.41
SBDSP1-204ENST00000453858 C20orf204Q6ZNR8 217 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms