RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 SYCE1Q8N0S2 351 aa12.69□□□□□ -0.38
VTA1-203ENST00000452973 TMC2Q8TDI7 906 aa12.69□□□□□ -0.38
VTA1-203ENST00000452973 SLC10A4Q96EP9 437 aa12.69□□□□□ -0.38
VTA1-203ENST00000452973 PPP1R16BQ96T49 567 aa12.69□□□□□ -0.38
VTA1-203ENST00000452973 RBAKQ9NYW8 714 aaPredicted RBP12.69□□□□□ -0.38
VTA1-203ENST00000452973 H0YCG3 227 aa12.69□□□□□ -0.38
VTA1-203ENST00000452973 EXTL3O43909 919 aa12.69□□□□□ -0.38
VTA1-203ENST00000452973 POTEJP0CG39 1038 aa12.69□□□□□ -0.38
VTA1-203ENST00000452973 CHRNB2P17787 502 aa12.69□□□□□ -0.38
VTA1-203ENST00000452973 OSBPP22059 807 aa12.69□□□□□ -0.38
VTA1-203ENST00000452973 PDE6CP51160 858 aa12.69□□□□□ -0.38
VTA1-203ENST00000452973 IGBP1P78318 339 aa12.69□□□□□ -0.38
VTA1-203ENST00000452973 ITIH3Q06033 890 aa12.69□□□□□ -0.38
VTA1-203ENST00000452973 MESDQ14696 234 aa12.69□□□□□ -0.38
VTA1-203ENST00000452973 ARMC9Q7Z3E5 817 aa12.69□□□□□ -0.38
VTA1-203ENST00000452973 TMEM174Q8WUU8 243 aa12.69□□□□□ -0.38
VTA1-203ENST00000452973 BTBD6Q96KE9 485 aa12.69□□□□□ -0.38
VTA1-203ENST00000452973 RNF14Q9UBS8 474 aa12.69□□□□□ -0.38
VTA1-203ENST00000452973 TRPC6Q9Y210 931 aa12.69□□□□□ -0.38
VTA1-203ENST00000452973 NOC2LQ9Y3T9 749 aaKnown RBP12.69□□□□□ -0.38
VTA1-203ENST00000452973 PTPRJQ12913 1337 aa12.68□□□□□ -0.38
VTA1-203ENST00000452973 A0A0A6YYK5 440 aaPredicted RBP12.68□□□□□ -0.38
VTA1-203ENST00000452973 KRIT1O00522 736 aa12.68□□□□□ -0.38
VTA1-203ENST00000452973 TXNP10599 105 aaKnown RBP12.68□□□□□ -0.38
VTA1-203ENST00000452973 ITGA4P13612 1032 aa12.68□□□□□ -0.38
VTA1-203ENST00000452973 CYP11B1P15538 503 aa12.68□□□□□ -0.38
VTA1-203ENST00000452973 ARL2P36404 184 aa12.68□□□□□ -0.38
VTA1-203ENST00000452973 PIK3CAP42336 1068 aa12.68□□□□□ -0.38
VTA1-203ENST00000452973 CARSP49589 748 aaKnown RBP12.68□□□□□ -0.38
VTA1-203ENST00000452973 GPC3P51654 580 aa12.68□□□□□ -0.38
VTA1-203ENST00000452973 PPIL2Q13356 520 aa12.68□□□□□ -0.38
VTA1-203ENST00000452973 LLGL1Q15334 1064 aa12.68□□□□□ -0.38
VTA1-203ENST00000452973 TMEM132AQ24JP5 1023 aa12.68□□□□□ -0.38
VTA1-203ENST00000452973 C2CD6Q53TS8 623 aa12.68□□□□□ -0.38
VTA1-203ENST00000452973 PSPC1Q8WXF1 523 aaKnown RBP12.68□□□□□ -0.38
VTA1-203ENST00000452973 SHC3Q92529 594 aa12.68□□□□□ -0.38
VTA1-203ENST00000452973 DDX47Q9H0S4 455 aaKnown RBP12.68□□□□□ -0.38
VTA1-203ENST00000452973 C1orf112Q9NSG2 853 aa12.68□□□□□ -0.38
VTA1-203ENST00000452973 NFU1Q9UMS0 254 aa12.68□□□□□ -0.38
VTA1-203ENST00000452973 SLC25A27O95847 323 aa12.68□□□□□ -0.38
VTA1-203ENST00000452973 GJA5P36382 358 aa12.68□□□□□ -0.38
VTA1-203ENST00000452973 OSTNP61366 133 aa12.68□□□□□ -0.38
VTA1-203ENST00000452973 MAP1SQ66K74 1059 aaPredicted RBP12.68□□□□□ -0.38
VTA1-203ENST00000452973 USP50Q70EL3 339 aaPredicted RBP12.68□□□□□ -0.38
VTA1-203ENST00000452973 RHPN2Q8IUC4 686 aa12.68□□□□□ -0.38
VTA1-203ENST00000452973 RNF149Q8NC42 400 aa12.68□□□□□ -0.38
VTA1-203ENST00000452973 NLRP4Q96MN2 994 aa12.68□□□□□ -0.38
VTA1-203ENST00000452973 NIFKQ9BYG3 293 aaKnown RBP12.68□□□□□ -0.38
VTA1-203ENST00000452973 NOCTQ9UK39 431 aaKnown RBP12.68□□□□□ -0.38
VTA1-203ENST00000452973 OTOFQ9HC10 1997 aa12.67□□□□□ -0.38
VTA1-203ENST00000452973 IGKV6D-21A0A0A0MT36 114 aa12.67□□□□□ -0.38
VTA1-203ENST00000452973 ERICH4A6NGS2 130 aa12.67□□□□□ -0.38
VTA1-203ENST00000452973 PGRMC1O00264 195 aaKnown RBP12.67□□□□□ -0.38
VTA1-203ENST00000452973 SOCS7O14512 581 aa12.67□□□□□ -0.38
VTA1-203ENST00000452973 RAD51CO43502 376 aa12.67□□□□□ -0.38
VTA1-203ENST00000452973 TGFB3P10600 412 aa12.67□□□□□ -0.38
VTA1-203ENST00000452973 COPB2P35606 906 aa12.67□□□□□ -0.38
VTA1-203ENST00000452973 GUCY2FP51841 1108 aa12.67□□□□□ -0.38
VTA1-203ENST00000452973 GPR162Q16538 588 aa12.67□□□□□ -0.38
VTA1-203ENST00000452973 WDR44Q5JSH3 913 aa12.67□□□□□ -0.38
VTA1-203ENST00000452973 TDRD10Q5VZ19 366 aaKnown RBP12.67□□□□□ -0.38
VTA1-203ENST00000452973 SCARA3Q6AZY7 606 aa12.67□□□□□ -0.38
VTA1-203ENST00000452973 FASTKD5Q7L8L6 764 aaKnown RBP12.67□□□□□ -0.38
VTA1-203ENST00000452973 PBKQ96KB5 322 aa12.67□□□□□ -0.38
VTA1-203ENST00000452973 FGD4Q96M96 766 aa12.67□□□□□ -0.38
VTA1-203ENST00000452973 MPHOSPH6Q99547 160 aaKnown RBP12.67□□□□□ -0.38
VTA1-203ENST00000452973 FAN1Q9Y2M0 1017 aa12.67□□□□□ -0.38
VTA1-203ENST00000452973 CLDN3O15551 220 aa12.67□□□□□ -0.38
VTA1-203ENST00000452973 HLA-DRAP01903 254 aa12.67□□□□□ -0.38
VTA1-203ENST00000452973 FGGP02679 453 aa12.67□□□□□ -0.38
VTA1-203ENST00000452973 TNFSF9P41273 254 aa12.67□□□□□ -0.38
VTA1-203ENST00000452973 TNNC1P63316 161 aa12.67□□□□□ -0.38
VTA1-203ENST00000452973 GPC5P78333 572 aa12.67□□□□□ -0.38
VTA1-203ENST00000452973 FMO1Q01740 532 aa12.67□□□□□ -0.38
VTA1-203ENST00000452973 AADACL2Q6P093 401 aa12.67□□□□□ -0.38
VTA1-203ENST00000452973 CRELD2Q6UXH1 353 aaPredicted RBP12.67□□□□□ -0.38
VTA1-203ENST00000452973 SLFN11Q7Z7L1 901 aa12.67□□□□□ -0.38
VTA1-203ENST00000452973 GPR20Q99678 358 aa12.67□□□□□ -0.38
VTA1-203ENST00000452973 UBXN6Q9BZV1 441 aa12.67□□□□□ -0.38
VTA1-203ENST00000452973 SUCLA2Q9P2R7 463 aaPredicted RBP12.67□□□□□ -0.38
VTA1-203ENST00000452973 KCNH4Q9UQ05 1017 aa12.67□□□□□ -0.38
VTA1-203ENST00000452973 COQ4Q9Y3A0 265 aa12.67□□□□□ -0.38
VTA1-203ENST00000452973 ALG6Q9Y672 507 aa12.67□□□□□ -0.38
VTA1-203ENST00000452973 CENPFP49454 3210 aa12.67□□□□□ -0.38
VTA1-203ENST00000452973 RTN2O75298 545 aa12.67□□□□□ -0.38
VTA1-203ENST00000452973 CSDE1O75534 798 aaKnown RBP12.67□□□□□ -0.38
VTA1-203ENST00000452973 ERVK-9P63128 1117 aa12.67□□□□□ -0.38
VTA1-203ENST00000452973 MOGSQ13724 837 aa12.67□□□□□ -0.38
VTA1-203ENST00000452973 CPNE8Q86YQ8 564 aa12.67□□□□□ -0.38
VTA1-203ENST00000452973 ZNF653Q96CK0 615 aa12.67□□□□□ -0.38
VTA1-203ENST00000452973 CEP89Q96ST8 783 aa12.67□□□□□ -0.38
VTA1-203ENST00000452973 ACBD3Q9H3P7 528 aa12.67□□□□□ -0.38
VTA1-203ENST00000452973 HPCAL4Q9UM19 191 aa12.67□□□□□ -0.38
VTA1-203ENST00000452973 STXBP5LQ9Y2K9 1186 aa12.67□□□□□ -0.38
VTA1-203ENST00000452973 MCM3APO60318 1980 aa12.66□□□□□ -0.38
VTA1-203ENST00000452973 RFC5P40937 340 aa12.66□□□□□ -0.38
VTA1-203ENST00000452973 HLTFQ14527 1009 aaKnown RBP eCLIP12.66□□□□□ -0.38
VTA1-203ENST00000452973 TARBP2Q15633 366 aaKnown RBP12.66□□□□□ -0.38
VTA1-203ENST00000452973 CELF3Q5SZQ8 465 aaKnown RBP12.66□□□□□ -0.38
VTA1-203ENST00000452973 GPAT2Q6NUI2 795 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms