RNA–Protein interactions for RNA: ENST00000452660.5

LRCH3-209, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 681 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-209ENST00000452660 TLK1Q9UKI8 766 aa3.39□□□□□ -1.87
LRCH3-209ENST00000452660 CDY2AQ9Y6F7 541 aa3.39□□□□□ -1.87
LRCH3-209ENST00000452660 ARHGEF17Q96PE2 2063 aaPredicted RBP3.39□□□□□ -1.87
LRCH3-209ENST00000452660 FAM83GA6ND36 823 aa3.38□□□□□ -1.87
LRCH3-209ENST00000452660 KRTAP29-1A8MX34 341 aaPredicted RBP3.38□□□□□ -1.87
LRCH3-209ENST00000452660 TMEM127O75204 238 aa3.38□□□□□ -1.87
LRCH3-209ENST00000452660 ASMTLO95671 621 aa3.38□□□□□ -1.87
LRCH3-209ENST00000452660 SNRPA1P09661 255 aaKnown RBP3.38□□□□□ -1.87
LRCH3-209ENST00000452660 SCNN1BP51168 640 aa3.38□□□□□ -1.87
LRCH3-209ENST00000452660 PTTG1IPP53801 180 aa3.38□□□□□ -1.87
LRCH3-209ENST00000452660 CLRN1P58418 232 aa3.38□□□□□ -1.87
LRCH3-209ENST00000452660 PPARAQ07869 468 aa3.38□□□□□ -1.87
LRCH3-209ENST00000452660 FOXF2Q12947 444 aa3.38□□□□□ -1.87
LRCH3-209ENST00000452660 RESTQ13127 1097 aa3.38□□□□□ -1.87
LRCH3-209ENST00000452660 TP53BP2Q13625 1128 aa3.38□□□□□ -1.87
LRCH3-209ENST00000452660 PAPD7Q5XG87 772 aaKnown RBP3.38□□□□□ -1.87
LRCH3-209ENST00000452660 C11orf74Q86VG3 221 aa3.38□□□□□ -1.87
LRCH3-209ENST00000452660 LRRTM3Q86VH5 581 aa3.38□□□□□ -1.87
LRCH3-209ENST00000452660 XYLT1Q86Y38 959 aa3.38□□□□□ -1.87
LRCH3-209ENST00000452660 DRC7Q8IY82 874 aa3.38□□□□□ -1.87
LRCH3-209ENST00000452660 SH3TC2Q8TF17 1288 aa3.38□□□□□ -1.87
LRCH3-209ENST00000452660 ASB10Q8WXI3 467 aa3.38□□□□□ -1.87
LRCH3-209ENST00000452660 NINJ1Q92982 152 aa3.38□□□□□ -1.87
LRCH3-209ENST00000452660 SPATA5L1Q9BVQ7 753 aa3.38□□□□□ -1.87
LRCH3-209ENST00000452660 REXO4Q9GZR2 422 aaKnown RBP3.38□□□□□ -1.87
LRCH3-209ENST00000452660 THG1LQ9NWX6 298 aaKnown RBP3.38□□□□□ -1.87
LRCH3-209ENST00000452660 RNF181Q9P0P0 153 aa3.38□□□□□ -1.87
LRCH3-209ENST00000452660 FRMD4BQ9Y2L6 1034 aa3.38□□□□□ -1.87
LRCH3-209ENST00000452660 RPTORQ8N122 1335 aa3.38□□□□□ -1.87
LRCH3-209ENST00000452660 PROB1E7EW31 1015 aa3.37□□□□□ -1.87
LRCH3-209ENST00000452660 PPP1R12AO14974 1030 aaPredicted RBP3.37□□□□□ -1.87
LRCH3-209ENST00000452660 CTSSP25774 331 aa3.37□□□□□ -1.87
LRCH3-209ENST00000452660 RARRES1P49788 294 aa3.37□□□□□ -1.87
LRCH3-209ENST00000452660 CACNA2D1P54289 1103 aa3.37□□□□□ -1.87
LRCH3-209ENST00000452660 SCAPQ12770 1279 aa3.37□□□□□ -1.87
LRCH3-209ENST00000452660 SP140Q13342 867 aa3.37□□□□□ -1.87
LRCH3-209ENST00000452660 SART3Q15020 963 aaKnown RBP3.37□□□□□ -1.87
LRCH3-209ENST00000452660 FAM180AQ6UWF9 173 aa3.37□□□□□ -1.87
LRCH3-209ENST00000452660 ZNF572Q7Z3I7 529 aaPredicted RBP3.37□□□□□ -1.87
LRCH3-209ENST00000452660 RASSF3Q86WH2 238 aa3.37□□□□□ -1.87
LRCH3-209ENST00000452660 SRRM1Q8IYB3 904 aaKnown RBP3.37□□□□□ -1.87
LRCH3-209ENST00000452660 OR2W6PQ8NHA6 318 aa3.37□□□□□ -1.87
LRCH3-209ENST00000452660 PMFBP1Q8TBY8 1022 aa3.37□□□□□ -1.87
LRCH3-209ENST00000452660 PLAAQ9Y263 795 aa3.37□□□□□ -1.87
LRCH3-209ENST00000452660 PPP2R3BQ9Y5P8 575 aa3.37□□□□□ -1.87
LRCH3-209ENST00000452660 NOX1Q9Y5S8 564 aa3.37□□□□□ -1.87
LRCH3-209ENST00000452660 ZMYM3Q14202 1370 aa3.37□□□□□ -1.87
LRCH3-209ENST00000452660 MYADML2A6NDP7 307 aa3.36□□□□□ -1.87
LRCH3-209ENST00000452660 DRGXA6NNA5 263 aa3.36□□□□□ -1.87
LRCH3-209ENST00000452660 ZNF891A8MT65 544 aaPredicted RBP3.36□□□□□ -1.87
LRCH3-209ENST00000452660 PRAMEF4O60810 478 aa3.36□□□□□ -1.87
LRCH3-209ENST00000452660 RBMXL2O75526 392 aaKnown RBP3.36□□□□□ -1.87
LRCH3-209ENST00000452660 IGLV2-14P01704 120 aa3.36□□□□□ -1.87
LRCH3-209ENST00000452660 NEK4P51957 841 aa3.36□□□□□ -1.87
LRCH3-209ENST00000452660 MST1LQ2TV78 715 aa3.36□□□□□ -1.87
LRCH3-209ENST00000452660 RRP12Q5JTH9 1297 aaKnown RBP3.36□□□□□ -1.87
LRCH3-209ENST00000452660 ATXN7L2Q5T6C5 722 aaPredicted RBP3.36□□□□□ -1.87
LRCH3-209ENST00000452660 KIAA1614Q5VZ46 1190 aa3.36□□□□□ -1.87
LRCH3-209ENST00000452660 ANKS6Q68DC2 871 aa3.36□□□□□ -1.87
LRCH3-209ENST00000452660 Q6ZNX1 250 aa3.36□□□□□ -1.87
LRCH3-209ENST00000452660 C16orf86Q6ZW13 317 aa3.36□□□□□ -1.87
LRCH3-209ENST00000452660 GLCCI1Q86VQ1 547 aa3.36□□□□□ -1.87
LRCH3-209ENST00000452660 HOMER1Q86YM7 354 aa3.36□□□□□ -1.87
LRCH3-209ENST00000452660 MAPKAPK5Q8IW41 473 aa3.36□□□□□ -1.87
LRCH3-209ENST00000452660 NXPE1Q8N323 547 aa3.36□□□□□ -1.87
LRCH3-209ENST00000452660 TMEM132CQ8N3T6 1108 aa3.36□□□□□ -1.87
LRCH3-209ENST00000452660 RAX2Q96IS3 184 aa3.36□□□□□ -1.87
LRCH3-209ENST00000452660 PDLIM2Q96JY6 352 aa3.36□□□□□ -1.87
LRCH3-209ENST00000452660 ACAP3Q96P50 834 aa3.36□□□□□ -1.87
LRCH3-209ENST00000452660 XPO5Q9HAV4 1204 aaKnown RBP eCLIP3.36□□□□□ -1.87
LRCH3-209ENST00000452660 BCO1Q9HAY6 547 aa3.36□□□□□ -1.87
LRCH3-209ENST00000452660 GALNT9Q9HCQ5 603 aa3.36□□□□□ -1.87
LRCH3-209ENST00000452660 KLHL11Q9NVR0 708 aa3.36□□□□□ -1.87
LRCH3-209ENST00000452660 SLC17A6Q9P2U8 582 aa3.36□□□□□ -1.87
LRCH3-209ENST00000452660 USP15Q9Y4E8 981 aaPredicted RBP3.36□□□□□ -1.87
LRCH3-209ENST00000452660 KDM1AO60341 852 aa3.35□□□□□ -1.87
LRCH3-209ENST00000452660 KPNA6O60684 536 aa3.35□□□□□ -1.87
LRCH3-209ENST00000452660 RAB11FIP3O75154 756 aa3.35□□□□□ -1.87
LRCH3-209ENST00000452660 ITGAMP11215 1152 aa3.35□□□□□ -1.87
LRCH3-209ENST00000452660 GCSHP23434 173 aa3.35□□□□□ -1.87
LRCH3-209ENST00000452660 SIM1P81133 766 aaPredicted RBP3.35□□□□□ -1.87
LRCH3-209ENST00000452660 TRIM25Q14258 630 aaKnown RBP3.35□□□□□ -1.87
LRCH3-209ENST00000452660 FSCN1Q16658 493 aaKnown RBP3.35□□□□□ -1.87
LRCH3-209ENST00000452660 MFSD14BQ5SR56 506 aa3.35□□□□□ -1.87
LRCH3-209ENST00000452660 PRAMEF14Q5SWL7 426 aa3.35□□□□□ -1.87
LRCH3-209ENST00000452660 ZNF362Q5T0B9 420 aaPredicted RBP3.35□□□□□ -1.87
LRCH3-209ENST00000452660 ABHD15Q6UXT9 468 aa3.35□□□□□ -1.87
LRCH3-209ENST00000452660 NPM2Q86SE8 214 aaKnown RBP3.35□□□□□ -1.87
LRCH3-209ENST00000452660 GPR149Q86SP6 731 aa3.35□□□□□ -1.87
LRCH3-209ENST00000452660 THNSL2Q86YJ6 484 aa3.35□□□□□ -1.87
LRCH3-209ENST00000452660 OR7D4Q8NG98 312 aa3.35□□□□□ -1.87
LRCH3-209ENST00000452660 OR56A1Q8NGH5 318 aa3.35□□□□□ -1.87
LRCH3-209ENST00000452660 FUBP3Q96I24 572 aaKnown RBP eCLIP3.35□□□□□ -1.87
LRCH3-209ENST00000452660 NEU1Q99519 415 aa3.35□□□□□ -1.87
LRCH3-209ENST00000452660 C1QTNF7Q9BXJ2 289 aa3.35□□□□□ -1.87
LRCH3-209ENST00000452660 TEX101Q9BY14 249 aa3.35□□□□□ -1.87
LRCH3-209ENST00000452660 RNPEPQ9H4A4 650 aa3.35□□□□□ -1.87
LRCH3-209ENST00000452660 TBCCD1Q9NVR7 557 aa3.35□□□□□ -1.87
LRCH3-209ENST00000452660 FOXJ2Q9P0K8 574 aa3.35□□□□□ -1.87
LRCH3-209ENST00000452660 KCNE5Q9UJ90 142 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms