RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 USP19O94966 1318 aa4.94□□□□□ -1.62
HMGB3P21-201ENST00000452483 COL17A1Q9UMD9 1497 aaPredicted RBP4.94□□□□□ -1.62
HMGB3P21-201ENST00000452483 GOLGA6L3A6NEY3 463 aa4.93□□□□□ -1.62
HMGB3P21-201ENST00000452483 PRR33A8MZF0 331 aa4.93□□□□□ -1.62
HMGB3P21-201ENST00000452483 ACKR2O00590 384 aa4.93□□□□□ -1.62
HMGB3P21-201ENST00000452483 APOL1O14791 398 aa4.93□□□□□ -1.62
HMGB3P21-201ENST00000452483 KIF5CO60282 957 aa4.93□□□□□ -1.62
HMGB3P21-201ENST00000452483 NDUFS2O75306 463 aa4.93□□□□□ -1.62
HMGB3P21-201ENST00000452483 ALDH2P05091 517 aa4.93□□□□□ -1.62
HMGB3P21-201ENST00000452483 P4HA1P13674 534 aa4.93□□□□□ -1.62
HMGB3P21-201ENST00000452483 TSHRP16473 764 aa4.93□□□□□ -1.62
HMGB3P21-201ENST00000452483 AGXTP21549 392 aa4.93□□□□□ -1.62
HMGB3P21-201ENST00000452483 ATP5F1P24539 256 aaPredicted RBP4.93□□□□□ -1.62
HMGB3P21-201ENST00000452483 LSP1P33241 339 aa4.93□□□□□ -1.62
HMGB3P21-201ENST00000452483 CD86P42081 329 aa4.93□□□□□ -1.62
HMGB3P21-201ENST00000452483 AGFG1P52594 562 aaKnown RBP4.93□□□□□ -1.62
HMGB3P21-201ENST00000452483 IRX3P78415 501 aaPredicted RBP4.93□□□□□ -1.62
HMGB3P21-201ENST00000452483 AKAP17AQ02040 695 aaKnown RBP4.93□□□□□ -1.62
HMGB3P21-201ENST00000452483 PPARDQ03181 441 aa4.93□□□□□ -1.62
HMGB3P21-201ENST00000452483 TLE2Q04725 743 aa4.93□□□□□ -1.62
HMGB3P21-201ENST00000452483 MRPL28Q13084 256 aaKnown RBP4.93□□□□□ -1.62
HMGB3P21-201ENST00000452483 ERV3-1Q14264 604 aa4.93□□□□□ -1.62
HMGB3P21-201ENST00000452483 TNIP1Q15025 636 aa4.93□□□□□ -1.62
HMGB3P21-201ENST00000452483 ZKSCAN8Q15776 578 aaPredicted RBP4.93□□□□□ -1.62
HMGB3P21-201ENST00000452483 AOC3Q16853 763 aa4.93□□□□□ -1.62
HMGB3P21-201ENST00000452483 MPEG1Q2M385 716 aa4.93□□□□□ -1.62
HMGB3P21-201ENST00000452483 ADCK5Q3MIX3 580 aa4.93□□□□□ -1.62
HMGB3P21-201ENST00000452483 TMEM201Q5SNT2 666 aa4.93□□□□□ -1.62
HMGB3P21-201ENST00000452483 ANGEL2Q5VTE6 544 aaKnown RBP4.93□□□□□ -1.62
HMGB3P21-201ENST00000452483 DCAF15Q66K64 600 aa4.93□□□□□ -1.62
HMGB3P21-201ENST00000452483 KCNT2Q6UVM3 1135 aa4.93□□□□□ -1.62
HMGB3P21-201ENST00000452483 CBLL1Q75N03 491 aa4.93□□□□□ -1.62
HMGB3P21-201ENST00000452483 B4GALNT4Q76KP1 1039 aa4.93□□□□□ -1.62
HMGB3P21-201ENST00000452483 MAEAQ7L5Y9 396 aa4.93□□□□□ -1.62
HMGB3P21-201ENST00000452483 NUP93Q8N1F7 819 aa4.93□□□□□ -1.62
HMGB3P21-201ENST00000452483 TSPYL6Q8N831 410 aa4.93□□□□□ -1.62
HMGB3P21-201ENST00000452483 TMEM145Q8NBT3 493 aa4.93□□□□□ -1.62
HMGB3P21-201ENST00000452483 ADCY4Q8NFM4 1077 aa4.93□□□□□ -1.62
HMGB3P21-201ENST00000452483 GOT1L1Q8NHS2 421 aaPredicted RBP4.93□□□□□ -1.62
HMGB3P21-201ENST00000452483 SSH1Q8WYL5 1049 aa4.93□□□□□ -1.62
HMGB3P21-201ENST00000452483 TAF4BQ92750 862 aa4.93□□□□□ -1.62
HMGB3P21-201ENST00000452483 MUL1Q969V5 352 aa4.93□□□□□ -1.62
HMGB3P21-201ENST00000452483 CEP95Q96GE4 821 aa4.93□□□□□ -1.62
HMGB3P21-201ENST00000452483 APIPQ96GX9 242 aa4.93□□□□□ -1.62
HMGB3P21-201ENST00000452483 CCDC140Q96MF4 163 aa4.93□□□□□ -1.62
HMGB3P21-201ENST00000452483 EYA3Q99504 573 aa4.93□□□□□ -1.62
HMGB3P21-201ENST00000452483 CGRRF1Q99675 332 aa4.93□□□□□ -1.62
HMGB3P21-201ENST00000452483 FSD1Q9BTV5 496 aa4.93□□□□□ -1.62
HMGB3P21-201ENST00000452483 TRPV4Q9HBA0 871 aa4.93□□□□□ -1.62
HMGB3P21-201ENST00000452483 OBP2BQ9NPH6 170 aa4.93□□□□□ -1.62
HMGB3P21-201ENST00000452483 TOMM22Q9NS69 142 aa4.93□□□□□ -1.62
HMGB3P21-201ENST00000452483 HPF1Q9NWY4 346 aa4.93□□□□□ -1.62
HMGB3P21-201ENST00000452483 TMOD4Q9NZQ9 345 aa4.93□□□□□ -1.62
HMGB3P21-201ENST00000452483 POGKQ9P215 609 aa4.93□□□□□ -1.62
HMGB3P21-201ENST00000452483 ADD3Q9UEY8 706 aaKnown RBP4.93□□□□□ -1.62
HMGB3P21-201ENST00000452483 EIF2B4Q9UI10 523 aaKnown RBP4.93□□□□□ -1.62
HMGB3P21-201ENST00000452483 SERPINB13Q9UIV8 391 aa4.93□□□□□ -1.62
HMGB3P21-201ENST00000452483 RPS6KA6Q9UK32 745 aa4.93□□□□□ -1.62
HMGB3P21-201ENST00000452483 FBXL5Q9UKA1 691 aa4.93□□□□□ -1.62
HMGB3P21-201ENST00000452483 EMC9Q9Y3B6 208 aa4.93□□□□□ -1.62
HMGB3P21-201ENST00000452483 PCDHGB5Q9Y5G0 923 aa4.93□□□□□ -1.62
HMGB3P21-201ENST00000452483 SNX11Q9Y5W9 270 aa4.93□□□□□ -1.62
HMGB3P21-201ENST00000452483 GPR45Q9Y5Y3 372 aa4.93□□□□□ -1.62
HMGB3P21-201ENST00000452483 ZFP37Q9Y6Q3 630 aaPredicted RBP4.93□□□□□ -1.62
HMGB3P21-201ENST00000452483 ARID1BQ8NFD5 2236 aaPredicted RBP4.93□□□□□ -1.62
HMGB3P21-201ENST00000452483 PITPNM2Q9BZ72 1349 aa4.93□□□□□ -1.62
HMGB3P21-201ENST00000452483 CNTNAP4Q9C0A0 1308 aa4.93□□□□□ -1.62
HMGB3P21-201ENST00000452483 ABCC9O60706 1549 aa4.92□□□□□ -1.62
HMGB3P21-201ENST00000452483 CCDC69A6NI79 296 aa4.92□□□□□ -1.62
HMGB3P21-201ENST00000452483 LGALS16A8MUM7 142 aa4.92□□□□□ -1.62
HMGB3P21-201ENST00000452483 TRIM38O00635 465 aa4.92□□□□□ -1.62
HMGB3P21-201ENST00000452483 TGM5O43548 720 aa4.92□□□□□ -1.62
HMGB3P21-201ENST00000452483 GOSR1O95249 250 aa4.92□□□□□ -1.62
HMGB3P21-201ENST00000452483 GUCA1CO95843 209 aa4.92□□□□□ -1.62
HMGB3P21-201ENST00000452483 GSNP06396 782 aa4.92□□□□□ -1.62
HMGB3P21-201ENST00000452483 CCDC175P0C221 793 aa4.92□□□□□ -1.62
HMGB3P21-201ENST00000452483 ZSCAN22P10073 491 aaPredicted RBP4.92□□□□□ -1.62
HMGB3P21-201ENST00000452483 KRT13P13646 458 aa4.92□□□□□ -1.62
HMGB3P21-201ENST00000452483 OSMP13725 252 aa4.92□□□□□ -1.62
HMGB3P21-201ENST00000452483 TAL1P17542 331 aaPredicted RBP4.92□□□□□ -1.62
HMGB3P21-201ENST00000452483 FUT4P22083 530 aa4.92□□□□□ -1.62
HMGB3P21-201ENST00000452483 HSPA4P34932 840 aa4.92□□□□□ -1.62
HMGB3P21-201ENST00000452483 ETV3P41162 512 aa4.92□□□□□ -1.62
HMGB3P21-201ENST00000452483 ECI1P42126 302 aa4.92□□□□□ -1.62
HMGB3P21-201ENST00000452483 MSH2P43246 934 aa4.92□□□□□ -1.62
HMGB3P21-201ENST00000452483 CTCFP49711 727 aaPredicted RBP4.92□□□□□ -1.62
HMGB3P21-201ENST00000452483 LIMK1P53667 647 aa4.92□□□□□ -1.62
HMGB3P21-201ENST00000452483 SLC12A2P55011 1212 aa4.92□□□□□ -1.62
HMGB3P21-201ENST00000452483 CSE1LP55060 971 aaKnown RBP4.92□□□□□ -1.62
HMGB3P21-201ENST00000452483 CASP6P55212 293 aa4.92□□□□□ -1.62
HMGB3P21-201ENST00000452483 POLR2FP61218 127 aaKnown RBP4.92□□□□□ -1.62
HMGB3P21-201ENST00000452483 SRSF2Q01130 221 aaKnown RBP4.92□□□□□ -1.62
HMGB3P21-201ENST00000452483 FOXO1Q12778 655 aa4.92□□□□□ -1.62
HMGB3P21-201ENST00000452483 IKZF1Q13422 519 aa4.92□□□□□ -1.62
HMGB3P21-201ENST00000452483 DLGAP5Q15398 846 aa4.92□□□□□ -1.62
HMGB3P21-201ENST00000452483 SURF1Q15526 300 aa4.92□□□□□ -1.62
HMGB3P21-201ENST00000452483 PRSS53Q2L4Q9 553 aa4.92□□□□□ -1.62
HMGB3P21-201ENST00000452483 MMEL1Q495T6 779 aa4.92□□□□□ -1.62
HMGB3P21-201ENST00000452483 HSP90B2PQ58FF3 399 aa4.92□□□□□ -1.62
HMGB3P21-201ENST00000452483 GTF2IRD2BQ6EKJ0 949 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms