RNA–Protein interactions for RNA: ENST00000450533.5

TTC3-210, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 1 (best)

Gene TTC3, Length 2,451 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-210ENST00000450533 MTA2O94776 668 aa23.79■■□□□ 1.4
TTC3-210ENST00000450533 CYP1A2P05177 515 aa23.79■■□□□ 1.4
TTC3-210ENST00000450533 KRT5P13647 590 aa23.79■■□□□ 1.4
TTC3-210ENST00000450533 DPEP1P16444 411 aa23.79■■□□□ 1.4
TTC3-210ENST00000450533 KRT76Q01546 638 aa23.79■■□□□ 1.4
TTC3-210ENST00000450533 CDR2Q01850 454 aa23.79■■□□□ 1.4
TTC3-210ENST00000450533 IFT88Q13099 833 aa23.79■■□□□ 1.4
TTC3-210ENST00000450533 SLC29A2Q14542 456 aa23.79■■□□□ 1.4
TTC3-210ENST00000450533 QPCTQ16769 361 aa23.79■■□□□ 1.4
TTC3-210ENST00000450533 RNF187Q5TA31 235 aaPredicted RBP23.79■■□□□ 1.4
TTC3-210ENST00000450533 RAPGEF5Q92565 580 aa23.79■■□□□ 1.4
TTC3-210ENST00000450533 ZBED3Q96IU2 234 aaPredicted RBP23.79■■□□□ 1.4
TTC3-210ENST00000450533 CEP170P1Q96L14 293 aa23.79■■□□□ 1.4
TTC3-210ENST00000450533 RPAP3Q9H6T3 665 aaPredicted RBP23.79■■□□□ 1.4
TTC3-210ENST00000450533 ANKEF1Q9NU02 776 aa23.79■■□□□ 1.4
TTC3-210ENST00000450533 GABBR1Q9UBS5 961 aa23.79■■□□□ 1.4
TTC3-210ENST00000450533 PCYOX1Q9UHG3 505 aa23.79■■□□□ 1.4
TTC3-210ENST00000450533 ADGRA3Q8IWK6 1321 aa23.79■■□□□ 1.4
TTC3-210ENST00000450533 RARAP10276 462 aa23.79■■□□□ 1.4
TTC3-210ENST00000450533 HSPA6P17066 643 aa23.79■■□□□ 1.4
TTC3-210ENST00000450533 EIF3BP55884 814 aaKnown RBP23.79■■□□□ 1.4
TTC3-210ENST00000450533 BAATQ14032 418 aaPredicted RBP23.79■■□□□ 1.4
TTC3-210ENST00000450533 DENND2CQ68D51 928 aa23.79■■□□□ 1.4
TTC3-210ENST00000450533 SV2AQ7L0J3 742 aa23.79■■□□□ 1.4
TTC3-210ENST00000450533 PHLDB2Q86SQ0 1253 aa23.79■■□□□ 1.4
TTC3-210ENST00000450533 SLC13A5Q86YT5 568 aaPredicted RBP23.79■■□□□ 1.4
TTC3-210ENST00000450533 SEMA4AQ9H3S1 761 aa23.79■■□□□ 1.4
TTC3-210ENST00000450533 USP20Q9Y2K6 914 aa23.79■■□□□ 1.4
TTC3-210ENST00000450533 ZNF862O60290 1169 aa23.78■■□□□ 1.4
TTC3-210ENST00000450533 SFNP31947 248 aa23.78■■□□□ 1.4
TTC3-210ENST00000450533 GPC3P51654 580 aa23.78■■□□□ 1.4
TTC3-210ENST00000450533 DRG2P55039 364 aaKnown RBP23.78■■□□□ 1.4
TTC3-210ENST00000450533 EN1Q05925 392 aaPredicted RBP23.78■■□□□ 1.4
TTC3-210ENST00000450533 FBXW10Q5XX13 1052 aa23.78■■□□□ 1.4
TTC3-210ENST00000450533 BBXQ8WY36 941 aaPredicted RBP23.78■■□□□ 1.4
TTC3-210ENST00000450533 ATG4CQ96DT6 458 aa23.78■■□□□ 1.4
TTC3-210ENST00000450533 GTF3C4Q9UKN8 822 aa23.78■■□□□ 1.4
TTC3-210ENST00000450533 FGFR4P22455 802 aa23.78■■□□□ 1.4
TTC3-210ENST00000450533 MICALCLQ6ZW33 695 aa23.78■■□□□ 1.4
TTC3-210ENST00000450533 SPATS2Q86XZ4 545 aaKnown RBP23.78■■□□□ 1.4
TTC3-210ENST00000450533 DDX1Q92499 740 aaKnown RBP23.78■■□□□ 1.4
TTC3-210ENST00000450533 TLCD1Q96CP7 247 aa23.78■■□□□ 1.4
TTC3-210ENST00000450533 TEPSINQ96N21 525 aa23.78■■□□□ 1.4
TTC3-210ENST00000450533 MOV10L1Q9BXT6 1211 aaKnown RBP23.78■■□□□ 1.4
TTC3-210ENST00000450533 COQ4Q9Y3A0 265 aa23.78■■□□□ 1.4
TTC3-210ENST00000450533 PCDHA3Q9Y5H8 950 aa23.78■■□□□ 1.4
TTC3-210ENST00000450533 CAPN7Q9Y6W3 813 aa23.78■■□□□ 1.4
TTC3-210ENST00000450533 HNRNPDLO14979 420 aaKnown RBP23.77■■□□□ 1.4
TTC3-210ENST00000450533 KCNA3P22001 575 aa23.77■■□□□ 1.4
TTC3-210ENST00000450533 COILP38432 576 aaPredicted RBP23.77■■□□□ 1.4
TTC3-210ENST00000450533 LMBRD2Q68DH5 695 aaPredicted RBP23.77■■□□□ 1.4
TTC3-210ENST00000450533 NLRX1Q86UT6 975 aa23.77■■□□□ 1.4
TTC3-210ENST00000450533 PAGR1Q9BTK6 254 aa23.77■■□□□ 1.4
TTC3-210ENST00000450533 STK32BQ9NY57 414 aa23.77■■□□□ 1.4
TTC3-210ENST00000450533 ZBED4O75132 1171 aa23.77■■□□□ 1.4
TTC3-210ENST00000450533 NUDT17P0C025 328 aa23.77■■□□□ 1.4
TTC3-210ENST00000450533 CYP24A1Q07973 514 aa23.77■■□□□ 1.4
TTC3-210ENST00000450533 HOOK3Q86VS8 718 aa23.77■■□□□ 1.4
TTC3-210ENST00000450533 FAM213AQ9BRX8 229 aa23.77■■□□□ 1.4
TTC3-210ENST00000450533 TRIM7Q9C029 511 aa23.77■■□□□ 1.4
TTC3-210ENST00000450533 PCDHA10Q9Y5I2 948 aa23.77■■□□□ 1.4
TTC3-210ENST00000450533 ZNFX1Q9P2E3 1918 aaKnown RBP23.77■■□□□ 1.4
TTC3-210ENST00000450533 PODXLO00592 558 aa23.76■■□□□ 1.39
TTC3-210ENST00000450533 CLDN3O15551 220 aa23.76■■□□□ 1.39
TTC3-210ENST00000450533 SIX1Q15475 284 aaPredicted RBP23.76■■□□□ 1.39
TTC3-210ENST00000450533 C2CD6Q53TS8 623 aa23.76■■□□□ 1.39
TTC3-210ENST00000450533 SPDYCQ5MJ68 293 aa23.76■■□□□ 1.39
TTC3-210ENST00000450533 CHADLQ6NUI6 762 aa23.76■■□□□ 1.39
TTC3-210ENST00000450533 SLC17A8Q8NDX2 589 aa23.76■■□□□ 1.39
TTC3-210ENST00000450533 RNF146Q9NTX7 359 aa23.76■■□□□ 1.39
TTC3-210ENST00000450533 DDX20Q9UHI6 824 aaKnown RBP23.76■■□□□ 1.39
TTC3-210ENST00000450533 MTUS1Q9ULD2 1270 aa23.76■■□□□ 1.39
TTC3-210ENST00000450533 SRRM3A6NNA2 597 aaPredicted RBP23.76■■□□□ 1.39
TTC3-210ENST00000450533 GRIN3BO60391 1043 aa23.76■■□□□ 1.39
TTC3-210ENST00000450533 RWDD2BP57060 319 aa23.76■■□□□ 1.39
TTC3-210ENST00000450533 MORC4Q8TE76 937 aa23.76■■□□□ 1.39
TTC3-210ENST00000450533 BICD1Q96G01 975 aa23.76■■□□□ 1.39
TTC3-210ENST00000450533 MFSD14AQ96MC6 490 aa23.76■■□□□ 1.39
TTC3-210ENST00000450533 MAP3K20Q9NYL2 800 aaKnown RBP23.76■■□□□ 1.39
TTC3-210ENST00000450533 ATXN2Q99700 1313 aaKnown RBP23.75■■□□□ 1.39
TTC3-210ENST00000450533 VWA5AO00534 786 aa23.75■■□□□ 1.39
TTC3-210ENST00000450533 GGPS1O95749 300 aa23.75■■□□□ 1.39
TTC3-210ENST00000450533 ACAD10Q6JQN1 1059 aa23.75■■□□□ 1.39
TTC3-210ENST00000450533 SWSAP1Q6NVH7 229 aa23.75■■□□□ 1.39
TTC3-210ENST00000450533 C1orf54Q8WWF1 131 aa23.75■■□□□ 1.39
TTC3-210ENST00000450533 AZI2Q9H6S1 392 aa23.75■■□□□ 1.39
TTC3-210ENST00000450533 UVRAGQ9P2Y5 699 aa23.75■■□□□ 1.39
TTC3-210ENST00000450533 FER1L6Q2WGJ9 1857 aa23.75■■□□□ 1.39
TTC3-210ENST00000450533 SLCO1A2P46721 670 aa23.75■■□□□ 1.39
TTC3-210ENST00000450533 LLGL2Q6P1M3 1020 aa23.75■■□□□ 1.39
TTC3-210ENST00000450533 CCDC25Q86WR0 208 aa23.75■■□□□ 1.39
TTC3-210ENST00000450533 KIFAP3Q92845 792 aa23.75■■□□□ 1.39
TTC3-210ENST00000450533 MTRF1LQ9UGC7 380 aaKnown RBP23.75■■□□□ 1.39
TTC3-210ENST00000450533 ANAPC7Q9UJX3 599 aa23.75■■□□□ 1.39
TTC3-210ENST00000450533 NR3C2P08235 984 aa23.74■■□□□ 1.39
TTC3-210ENST00000450533 IFI35P80217 286 aaPredicted RBP23.74■■□□□ 1.39
TTC3-210ENST00000450533 SNX1Q13596 522 aa23.74■■□□□ 1.39
TTC3-210ENST00000450533 TMC2Q8TDI7 906 aa23.74■■□□□ 1.39
TTC3-210ENST00000450533 FBXL18Q96ME1 805 aa23.74■■□□□ 1.39
TTC3-210ENST00000450533 SELENOSQ9BQE4 189 aa23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms