RNA–Protein interactions for RNA: ENST00000450385.5

SGCE-208, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-208ENST00000450385 UBA7P41226 1012 aa17.63■□□□□ 0.41
SGCE-208ENST00000450385 GLUD2P49448 558 aa17.63■□□□□ 0.41
SGCE-208ENST00000450385 CLCN4P51793 760 aa17.63■□□□□ 0.41
SGCE-208ENST00000450385 PEX3P56589 373 aa17.63■□□□□ 0.41
SGCE-208ENST00000450385 KIAA1841Q6NSI8 718 aa17.63■□□□□ 0.41
SGCE-208ENST00000450385 PDXDC1Q6P996 788 aa17.63■□□□□ 0.41
SGCE-208ENST00000450385 PLCD3Q8N3E9 789 aa17.63■□□□□ 0.41
SGCE-208ENST00000450385 CMASQ8NFW8 434 aaPredicted RBP17.63■□□□□ 0.41
SGCE-208ENST00000450385 EDAQ92838 391 aa17.63■□□□□ 0.41
SGCE-208ENST00000450385 CALML4Q96GE6 196 aa17.63■□□□□ 0.41
SGCE-208ENST00000450385 APOL6Q9BWW8 343 aa17.63■□□□□ 0.41
SGCE-208ENST00000450385 MRPL4Q9BYD3 311 aaKnown RBP17.63■□□□□ 0.41
SGCE-208ENST00000450385 KCNH6Q9H252 994 aa17.63■□□□□ 0.41
SGCE-208ENST00000450385 SFXN1Q9H9B4 322 aa17.63■□□□□ 0.41
SGCE-208ENST00000450385 KMT5AQ9NQR1 393 aa17.63■□□□□ 0.41
SGCE-208ENST00000450385 TOPORSQ9NS56 1045 aaPredicted RBP17.63■□□□□ 0.41
SGCE-208ENST00000450385 MARCH5Q9NX47 278 aa17.63■□□□□ 0.41
SGCE-208ENST00000450385 LARSQ9P2J5 1176 aaKnown RBP17.63■□□□□ 0.41
SGCE-208ENST00000450385 HCN4Q9Y3Q4 1203 aa17.63■□□□□ 0.41
SGCE-208ENST00000450385 CITO14578 2027 aa17.62■□□□□ 0.41
SGCE-208ENST00000450385 HIP1RO75146 1068 aa17.62■□□□□ 0.41
SGCE-208ENST00000450385 TADA2AO75478 443 aa17.62■□□□□ 0.41
SGCE-208ENST00000450385 BRD1O95696 1058 aa17.62■□□□□ 0.41
SGCE-208ENST00000450385 CNPP09543 421 aaKnown RBP17.62■□□□□ 0.41
SGCE-208ENST00000450385 RBM10P98175 930 aaKnown RBP17.62■□□□□ 0.41
SGCE-208ENST00000450385 BMP8AQ7Z5Y6 402 aa17.62■□□□□ 0.41
SGCE-208ENST00000450385 DAW1Q8N136 415 aa17.62■□□□□ 0.41
SGCE-208ENST00000450385 UROC1Q96N76 676 aa17.62■□□□□ 0.41
SGCE-208ENST00000450385 ACO2Q99798 780 aaKnown RBP17.62■□□□□ 0.41
SGCE-208ENST00000450385 PLEKHA4Q9H4M7 779 aa17.62■□□□□ 0.41
SGCE-208ENST00000450385 C11orf16Q9NQ32 467 aa17.62■□□□□ 0.41
SGCE-208ENST00000450385 SNTG2Q9NY99 539 aa17.62■□□□□ 0.41
SGCE-208ENST00000450385 ODF2LQ9ULJ1 636 aa17.62■□□□□ 0.41
SGCE-208ENST00000450385 PRG3Q9Y2Y8 225 aaPredicted RBP17.62■□□□□ 0.41
SGCE-208ENST00000450385 MORC2Q9Y6X9 1032 aaPredicted RBP17.62■□□□□ 0.41
SGCE-208ENST00000450385 SF3B1O75533 1304 aaKnown RBP eCLIP17.62■□□□□ 0.41
SGCE-208ENST00000450385 MYO10Q9HD67 2058 aa17.62■□□□□ 0.41
SGCE-208ENST00000450385 PP2D1A8MPX8 630 aa17.61■□□□□ 0.41
SGCE-208ENST00000450385 RECQL4O94761 1208 aa17.61■□□□□ 0.41
SGCE-208ENST00000450385 PLS3P13797 630 aa17.61■□□□□ 0.41
SGCE-208ENST00000450385 CDC25AP30304 524 aa17.61■□□□□ 0.41
SGCE-208ENST00000450385 YARSP54577 528 aaKnown RBP17.61■□□□□ 0.41
SGCE-208ENST00000450385 SLC12A3P55017 1021 aa17.61■□□□□ 0.41
SGCE-208ENST00000450385 STRN3Q13033 797 aa17.61■□□□□ 0.41
SGCE-208ENST00000450385 HSP90AA2PQ14568 343 aaPredicted RBP17.61■□□□□ 0.41
SGCE-208ENST00000450385 TMEM119Q4V9L6 283 aa17.61■□□□□ 0.41
SGCE-208ENST00000450385 NT5DC1Q5TFE4 455 aa17.61■□□□□ 0.41
SGCE-208ENST00000450385 FUT10Q6P4F1 479 aa17.61■□□□□ 0.41
SGCE-208ENST00000450385 CDR2LQ86X02 465 aaPredicted RBP17.61■□□□□ 0.41
SGCE-208ENST00000450385 AUTS2Q8WXX7 1259 aa17.61■□□□□ 0.41
SGCE-208ENST00000450385 FBXL18Q96ME1 805 aa17.61■□□□□ 0.41
SGCE-208ENST00000450385 CCDC94Q9BW85 323 aaPredicted RBP17.61■□□□□ 0.41
SGCE-208ENST00000450385 PTPRHQ9HD43 1115 aa17.61■□□□□ 0.41
SGCE-208ENST00000450385 TMEM189-UBE2V1I3L0A0 370 aa17.6■□□□□ 0.41
SGCE-208ENST00000450385 PLA2G4BP0C869 781 aa17.6■□□□□ 0.41
SGCE-208ENST00000450385 MCF2P10911 925 aa17.6■□□□□ 0.41
SGCE-208ENST00000450385 GRM5P41594 1212 aa17.6■□□□□ 0.41
SGCE-208ENST00000450385 MAPK7Q13164 816 aa17.6■□□□□ 0.41
SGCE-208ENST00000450385 KYAT1Q16773 422 aa17.6■□□□□ 0.41
SGCE-208ENST00000450385 XKR4Q5GH76 650 aa17.6■□□□□ 0.41
SGCE-208ENST00000450385 ZPBP2Q6X784 338 aa17.6■□□□□ 0.41
SGCE-208ENST00000450385 RTL10Q7L3V2 364 aa17.6■□□□□ 0.41
SGCE-208ENST00000450385 DDX27Q96GQ7 796 aaKnown RBP17.6■□□□□ 0.41
SGCE-208ENST00000450385 RPGRIP1Q96KN7 1286 aa17.6■□□□□ 0.41
SGCE-208ENST00000450385 MFSD14AQ96MC6 490 aa17.6■□□□□ 0.41
SGCE-208ENST00000450385 PNMA5Q96PV4 448 aa17.6■□□□□ 0.41
SGCE-208ENST00000450385 RUSC1Q9BVN2 902 aa17.6■□□□□ 0.41
SGCE-208ENST00000450385 SLC38A7Q9NVC3 462 aa17.6■□□□□ 0.41
SGCE-208ENST00000450385 KLK14Q9P0G3 267 aa17.6■□□□□ 0.41
SGCE-208ENST00000450385 TTLL13PA6NNM8 815 aa17.59■□□□□ 0.41
SGCE-208ENST00000450385 PTGESO14684 152 aa17.59■□□□□ 0.41
SGCE-208ENST00000450385 TRAPPC3O43617 180 aa17.59■□□□□ 0.41
SGCE-208ENST00000450385 TOM1L1O75674 476 aa17.59■□□□□ 0.41
SGCE-208ENST00000450385 GLUD1P00367 558 aa17.59■□□□□ 0.41
SGCE-208ENST00000450385 EPCAMP16422 314 aa17.59■□□□□ 0.41
SGCE-208ENST00000450385 PROZP22891 400 aa17.59■□□□□ 0.41
SGCE-208ENST00000450385 NAB2Q15742 525 aa17.59■□□□□ 0.41
SGCE-208ENST00000450385 DCLRE1AQ6PJP8 1040 aa17.59■□□□□ 0.41
SGCE-208ENST00000450385 ALKAL1Q6UXT8 129 aa17.59■□□□□ 0.41
SGCE-208ENST00000450385 KCNK18Q7Z418 384 aa17.59■□□□□ 0.41
SGCE-208ENST00000450385 GPR149Q86SP6 731 aa17.59■□□□□ 0.41
SGCE-208ENST00000450385 ZDHHC14Q8IZN3 488 aa17.59■□□□□ 0.41
SGCE-208ENST00000450385 TSPAN18Q96SJ8 248 aa17.59■□□□□ 0.41
SGCE-208ENST00000450385 CCSER1Q9C0I3 900 aa17.59■□□□□ 0.41
SGCE-208ENST00000450385 ZSCAN16Q9H4T2 348 aaPredicted RBP17.59■□□□□ 0.41
SGCE-208ENST00000450385 MUTYHQ9UIF7 546 aa17.59■□□□□ 0.41
SGCE-208ENST00000450385 TEX28O15482 410 aa17.58■□□□□ 0.4
SGCE-208ENST00000450385 LIG1P18858 919 aa17.58■□□□□ 0.4
SGCE-208ENST00000450385 ZXDAP98168 799 aa17.58■□□□□ 0.4
SGCE-208ENST00000450385 SF3A1Q15459 793 aaKnown RBP17.58■□□□□ 0.4
SGCE-208ENST00000450385 ZRSR1Q15695 479 aaKnown RBP17.58■□□□□ 0.4
SGCE-208ENST00000450385 RARS2Q5T160 578 aaKnown RBP17.58■□□□□ 0.4
SGCE-208ENST00000450385 EEF1DP3Q658K8 133 aa17.58■□□□□ 0.4
SGCE-208ENST00000450385 MPZL3Q6UWV2 235 aa17.58■□□□□ 0.4
SGCE-208ENST00000450385 TAS1R1Q7RTX1 841 aa17.58■□□□□ 0.4
SGCE-208ENST00000450385 UBALD2Q8IYN6 164 aa17.58■□□□□ 0.4
SGCE-208ENST00000450385 TMEM161BQ8NDZ6 487 aa17.58■□□□□ 0.4
SGCE-208ENST00000450385 ACSF2Q96CM8 615 aaPredicted RBP17.58■□□□□ 0.4
SGCE-208ENST00000450385 PPP1R10Q96QC0 940 aaKnown RBP17.58■□□□□ 0.4
SGCE-208ENST00000450385 TTPALQ9BTX7 342 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms