RNA–Protein interactions for RNA: ENST00000450162.6

SNRNP27-203, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 2

Gene SNRNP27, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-203ENST00000450162 NOLC1Q14978 699 aaKnown RBP eCLIP14.29□□□□□ -0.12
SNRNP27-203ENST00000450162 L1TD1Q5T7N2 865 aaKnown RBP14.29□□□□□ -0.12
SNRNP27-203ENST00000450162 STAMQ92783 540 aa14.29□□□□□ -0.12
SNRNP27-203ENST00000450162 PPP2R3CQ969Q6 453 aa14.29□□□□□ -0.12
SNRNP27-203ENST00000450162 PAGE5Q96GU1 130 aa14.29□□□□□ -0.12
SNRNP27-203ENST00000450162 ACAP3Q96P50 834 aa14.29□□□□□ -0.12
SNRNP27-203ENST00000450162 TSPAN18Q96SJ8 248 aa14.29□□□□□ -0.12
SNRNP27-203ENST00000450162 NRDE2Q9H7Z3 1164 aa14.29□□□□□ -0.12
SNRNP27-203ENST00000450162 TMEM206Q9H813 350 aa14.29□□□□□ -0.12
SNRNP27-203ENST00000450162 USP20Q9Y2K6 914 aa14.29□□□□□ -0.12
SNRNP27-203ENST00000450162 CHD9Q3L8U1 2897 aa14.28□□□□□ -0.12
SNRNP27-203ENST00000450162 GRM6O15303 877 aa14.28□□□□□ -0.12
SNRNP27-203ENST00000450162 EIF3DO15371 548 aaKnown RBP eCLIP14.28□□□□□ -0.12
SNRNP27-203ENST00000450162 NCK2O43639 380 aa14.28□□□□□ -0.12
SNRNP27-203ENST00000450162 ZC3H11AO75152 810 aaKnown RBP eCLIP14.28□□□□□ -0.12
SNRNP27-203ENST00000450162 RECQL4O94761 1208 aa14.28□□□□□ -0.12
SNRNP27-203ENST00000450162 ZNF202O95125 648 aa14.28□□□□□ -0.12
SNRNP27-203ENST00000450162 GCNT3O95395 438 aa14.28□□□□□ -0.12
SNRNP27-203ENST00000450162 POMCP01189 267 aa14.28□□□□□ -0.12
SNRNP27-203ENST00000450162 THP07101 528 aa14.28□□□□□ -0.12
SNRNP27-203ENST00000450162 GALTP07902 379 aa14.28□□□□□ -0.12
SNRNP27-203ENST00000450162 CLTAP09496 248 aa14.28□□□□□ -0.12
SNRNP27-203ENST00000450162 MATR3P43243 847 aaKnown RBP eCLIP14.28□□□□□ -0.123e-6■■□□□ 12.9
SNRNP27-203ENST00000450162 AFMP43652 599 aa14.28□□□□□ -0.12
SNRNP27-203ENST00000450162 DSC1Q08554 894 aa14.28□□□□□ -0.12
SNRNP27-203ENST00000450162 COASYQ13057 564 aa14.28□□□□□ -0.12
SNRNP27-203ENST00000450162 PSMD2Q13200 908 aa14.28□□□□□ -0.12
SNRNP27-203ENST00000450162 ZC2HC1CQ53FD0 456 aaPredicted RBP14.28□□□□□ -0.12
SNRNP27-203ENST00000450162 ZNF280BQ86YH2 543 aa14.28□□□□□ -0.12
SNRNP27-203ENST00000450162 SLC39A11Q8N1S5 342 aa14.28□□□□□ -0.12
SNRNP27-203ENST00000450162 GSTCDQ8NEC7 633 aa14.28□□□□□ -0.12
SNRNP27-203ENST00000450162 POF1BQ8WVV4 589 aa14.28□□□□□ -0.12
SNRNP27-203ENST00000450162 TMEM169Q96HH4 297 aa14.28□□□□□ -0.12
SNRNP27-203ENST00000450162 ZFP42Q96MM3 310 aa14.28□□□□□ -0.12
SNRNP27-203ENST00000450162 PLEKHA5Q9HAU0 1116 aa14.28□□□□□ -0.12
SNRNP27-203ENST00000450162 ALG13Q9NP73 1137 aaKnown RBP14.28□□□□□ -0.12
SNRNP27-203ENST00000450162 ANKFY1Q9P2R3 1169 aa14.28□□□□□ -0.12
SNRNP27-203ENST00000450162 FAN1Q9Y2M0 1017 aa14.28□□□□□ -0.12
SNRNP27-203ENST00000450162 GDAQ9Y2T3 454 aa14.28□□□□□ -0.12
SNRNP27-203ENST00000450162 STYXL1Q9Y6J8 313 aa14.28□□□□□ -0.12
SNRNP27-203ENST00000450162 TCHHQ07283 1943 aa14.27□□□□□ -0.12
SNRNP27-203ENST00000450162 A0A0B4J269 797 aa14.27□□□□□ -0.13
SNRNP27-203ENST00000450162 FSD2A1L4K1 749 aa14.27□□□□□ -0.13
SNRNP27-203ENST00000450162 OGTO15294 1046 aa14.27□□□□□ -0.13
SNRNP27-203ENST00000450162 DDHD2O94830 711 aa14.27□□□□□ -0.13
SNRNP27-203ENST00000450162 SCNN1GP51170 649 aa14.27□□□□□ -0.13
SNRNP27-203ENST00000450162 SNRPFP62306 86 aaKnown RBP14.27□□□□□ -0.13
SNRNP27-203ENST00000450162 EHHADHQ08426 723 aa14.27□□□□□ -0.13
SNRNP27-203ENST00000450162 TUSC3Q13454 348 aa14.27□□□□□ -0.13
SNRNP27-203ENST00000450162 XKR4Q5GH76 650 aa14.27□□□□□ -0.13
SNRNP27-203ENST00000450162 FAM26FQ5R3K3 315 aa14.27□□□□□ -0.13
SNRNP27-203ENST00000450162 ALKAL1Q6UXT8 129 aa14.27□□□□□ -0.13
SNRNP27-203ENST00000450162 KRBA2Q6ZNG9 492 aa14.27□□□□□ -0.13
SNRNP27-203ENST00000450162 ZBTB33Q86T24 672 aa14.27□□□□□ -0.13
SNRNP27-203ENST00000450162 COLGALT2Q8IYK4 626 aa14.27□□□□□ -0.13
SNRNP27-203ENST00000450162 CCDC47Q96A33 483 aaKnown RBP14.27□□□□□ -0.13
SNRNP27-203ENST00000450162 IGSF21Q96ID5 467 aa14.27□□□□□ -0.13
SNRNP27-203ENST00000450162 ZBTB45Q96K62 511 aaPredicted RBP14.27□□□□□ -0.13
SNRNP27-203ENST00000450162 IPO9Q96P70 1041 aaKnown RBP14.27□□□□□ -0.13
SNRNP27-203ENST00000450162 COLEC11Q9BWP8 271 aa14.27□□□□□ -0.13
SNRNP27-203ENST00000450162 GBP3Q9H0R5 595 aa14.27□□□□□ -0.13
SNRNP27-203ENST00000450162 NSUN3Q9H649 340 aaKnown RBP14.27□□□□□ -0.13
SNRNP27-203ENST00000450162 NGRNQ9NPE2 291 aaKnown RBP14.27□□□□□ -0.13
SNRNP27-203ENST00000450162 TLR9Q9NR96 1032 aa14.27□□□□□ -0.13
SNRNP27-203ENST00000450162 SLC38A7Q9NVC3 462 aa14.27□□□□□ -0.13
SNRNP27-203ENST00000450162 MIOSQ9NXC5 875 aa14.27□□□□□ -0.13
SNRNP27-203ENST00000450162 TBC1D7Q9P0N9 293 aa14.27□□□□□ -0.13
SNRNP27-203ENST00000450162 HCSTQ9UBK5 93 aa14.27□□□□□ -0.13
SNRNP27-203ENST00000450162 CDH23Q9H251 3354 aa14.26□□□□□ -0.13
SNRNP27-203ENST00000450162 UBE4BO95155 1302 aa14.26□□□□□ -0.13
SNRNP27-203ENST00000450162 NRP1O14786 923 aa14.26□□□□□ -0.13
SNRNP27-203ENST00000450162 KIAA0391O15091 583 aaKnown RBP14.26□□□□□ -0.13
SNRNP27-203ENST00000450162 AFF1P51825 1210 aaKnown RBP14.26□□□□□ -0.13
SNRNP27-203ENST00000450162 FAM160A1Q05DH4 1040 aa14.26□□□□□ -0.13
SNRNP27-203ENST00000450162 CUL4BQ13620 913 aa14.26□□□□□ -0.13
SNRNP27-203ENST00000450162 HSP90AA2PQ14568 343 aaPredicted RBP14.26□□□□□ -0.13
SNRNP27-203ENST00000450162 DDX53Q86TM3 631 aaKnown RBP14.26□□□□□ -0.13
SNRNP27-203ENST00000450162 CD302Q8IX05 232 aa14.26□□□□□ -0.13
SNRNP27-203ENST00000450162 SYCP3Q8IZU3 236 aa14.26□□□□□ -0.13
SNRNP27-203ENST00000450162 TMEM87AQ8NBN3 555 aa14.26□□□□□ -0.13
SNRNP27-203ENST00000450162 TIGD1Q96MW7 591 aa14.26□□□□□ -0.13
SNRNP27-203ENST00000450162 MSTO1Q9BUK6 570 aa14.26□□□□□ -0.13
SNRNP27-203ENST00000450162 BLZF1Q9H2G9 400 aa14.26□□□□□ -0.13
SNRNP27-203ENST00000450162 KLK14Q9P0G3 267 aa14.26□□□□□ -0.13
SNRNP27-203ENST00000450162 HOOK1Q9UJC3 728 aaKnown RBP14.26□□□□□ -0.13
SNRNP27-203ENST00000450162 NLRC5Q86WI3 1866 aa14.26□□□□□ -0.13
SNRNP27-203ENST00000450162 SMIM28A0A1B0GU29 152 aa14.25□□□□□ -0.13
SNRNP27-203ENST00000450162 PTGESO14684 152 aa14.25□□□□□ -0.13
SNRNP27-203ENST00000450162 LDHAP00338 332 aaKnown RBP14.25□□□□□ -0.13
SNRNP27-203ENST00000450162 KCNE1P15382 129 aa14.25□□□□□ -0.13
SNRNP27-203ENST00000450162 GARTP22102 1010 aa14.25□□□□□ -0.13
SNRNP27-203ENST00000450162 OR1G1P47890 313 aa14.25□□□□□ -0.13
SNRNP27-203ENST00000450162 SLC11A1P49279 550 aa14.25□□□□□ -0.13
SNRNP27-203ENST00000450162 CAMK1Q14012 370 aa14.25□□□□□ -0.13
SNRNP27-203ENST00000450162 ELOA2Q8IYF1 753 aaPredicted RBP14.25□□□□□ -0.13
SNRNP27-203ENST00000450162 FMR1NBQ8N0W7 255 aaPredicted RBP14.25□□□□□ -0.13
SNRNP27-203ENST00000450162 CEP120Q8N960 986 aa14.25□□□□□ -0.13
SNRNP27-203ENST00000450162 ZNF507Q8TCN5 953 aa14.25□□□□□ -0.13
SNRNP27-203ENST00000450162 MICAL1Q8TDZ2 1067 aa14.25□□□□□ -0.13
SNRNP27-203ENST00000450162 DDX27Q96GQ7 796 aaKnown RBP14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms