RNA–Protein interactions for RNA: ENST00000449811.5

CPSF7-207, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-207ENST00000449811 CPB2Q96IY4 423 aa15.26■□□□□ 0.03
CPSF7-207ENST00000449811 C22orf23Q9BZE7 217 aa15.26■□□□□ 0.03
CPSF7-207ENST00000449811 NXF3Q9H4D5 531 aaKnown RBP15.26■□□□□ 0.03
CPSF7-207ENST00000449811 RAB23Q9ULC3 237 aa15.26■□□□□ 0.03
CPSF7-207ENST00000449811 MRPS17Q9Y2R5 130 aaKnown RBP15.26■□□□□ 0.03
CPSF7-207ENST00000449811 EML1O00423 815 aa15.25■□□□□ 0.03
CPSF7-207ENST00000449811 SLC30A4O14863 429 aa15.25■□□□□ 0.03
CPSF7-207ENST00000449811 HMGB1P09429 215 aaKnown RBP15.25■□□□□ 0.03
CPSF7-207ENST00000449811 AKAP5P24588 427 aa15.25■□□□□ 0.03
CPSF7-207ENST00000449811 NLRP5P59047 1200 aa15.25■□□□□ 0.03
CPSF7-207ENST00000449811 ADCY1Q08828 1119 aa15.25■□□□□ 0.03
CPSF7-207ENST00000449811 GRIK3Q13003 919 aa15.25■□□□□ 0.03
CPSF7-207ENST00000449811 MTAPQ13126 283 aa15.25■□□□□ 0.03
CPSF7-207ENST00000449811 KRT32Q14532 448 aa15.25■□□□□ 0.03
CPSF7-207ENST00000449811 EMC2Q15006 297 aa15.25■□□□□ 0.03
CPSF7-207ENST00000449811 TSGA10IPQ3SY00 556 aa15.25■□□□□ 0.03
CPSF7-207ENST00000449811 NPAS3Q8IXF0 933 aa15.25■□□□□ 0.03
CPSF7-207ENST00000449811 CLSTN3Q9BQT9 956 aa15.25■□□□□ 0.03
CPSF7-207ENST00000449811 SLC26A6Q9BXS9 759 aa15.25■□□□□ 0.03
CPSF7-207ENST00000449811 RNF26Q9BY78 433 aaPredicted RBP15.25■□□□□ 0.03
CPSF7-207ENST00000449811 CACNG4Q9UBN1 327 aa15.25■□□□□ 0.03
CPSF7-207ENST00000449811 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.25■□□□□ 0.03
CPSF7-207ENST00000449811 DOCK6Q96HP0 2047 aa15.25■□□□□ 0.03
CPSF7-207ENST00000449811 MAP1BP46821 2468 aaKnown RBP15.25■□□□□ 0.03
CPSF7-207ENST00000449811 TDRD15B5MCY1 1934 aaKnown RBP15.25■□□□□ 0.03
CPSF7-207ENST00000449811 NID2Q14112 1375 aa15.24■□□□□ 0.03
CPSF7-207ENST00000449811 INO80B-WBP1J3KQ70 363 aa15.24■□□□□ 0.03
CPSF7-207ENST00000449811 PTENP60484 403 aa15.24■□□□□ 0.03
CPSF7-207ENST00000449811 HSP90AA2PQ14568 343 aaPredicted RBP15.24■□□□□ 0.03
CPSF7-207ENST00000449811 PSMD5Q16401 504 aa15.24■□□□□ 0.03
CPSF7-207ENST00000449811 LPAL2Q16609 132 aa15.24■□□□□ 0.03
CPSF7-207ENST00000449811 LAIR1Q6GTX8 287 aa15.24■□□□□ 0.03
CPSF7-207ENST00000449811 CEP57Q86XR8 500 aa15.24■□□□□ 0.03
CPSF7-207ENST00000449811 LNX1Q8TBB1 728 aaPredicted RBP15.24■□□□□ 0.03
CPSF7-207ENST00000449811 SLC7A14Q8TBB6 771 aa15.24■□□□□ 0.03
CPSF7-207ENST00000449811 HASPINQ8TF76 798 aa15.24■□□□□ 0.03
CPSF7-207ENST00000449811 PIK3R5Q8WYR1 880 aa15.24■□□□□ 0.03
CPSF7-207ENST00000449811 BRF1Q92994 677 aa15.24■□□□□ 0.03
CPSF7-207ENST00000449811 TTPALQ9BTX7 342 aa15.24■□□□□ 0.03
CPSF7-207ENST00000449811 SLKQ9H2G2 1235 aaPredicted RBP15.24■□□□□ 0.03
CPSF7-207ENST00000449811 HEBP1Q9NRV9 189 aa15.24■□□□□ 0.03
CPSF7-207ENST00000449811 WRAP73Q9P2S5 460 aaPredicted RBP15.24■□□□□ 0.03
CPSF7-207ENST00000449811 KCNH3Q9ULD8 1083 aa15.24■□□□□ 0.03
CPSF7-207ENST00000449811 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.23■□□□□ 0.03
CPSF7-207ENST00000449811 ECI2O75521 394 aa15.23■□□□□ 0.03
CPSF7-207ENST00000449811 P4HBP07237 508 aaKnown RBP15.23■□□□□ 0.03
CPSF7-207ENST00000449811 POU2F2P09086 479 aa15.23■□□□□ 0.03
CPSF7-207ENST00000449811 NRLP54845 237 aa15.23■□□□□ 0.03
CPSF7-207ENST00000449811 PPP2R5CQ13362 524 aa15.23■□□□□ 0.03
CPSF7-207ENST00000449811 FZD5Q13467 585 aa15.23■□□□□ 0.03
CPSF7-207ENST00000449811 PPP2R5DQ14738 602 aa15.23■□□□□ 0.03
CPSF7-207ENST00000449811 NTRK3Q16288 839 aa15.23■□□□□ 0.03
CPSF7-207ENST00000449811 PABPC1LQ4VXU2 614 aaKnown RBP15.23■□□□□ 0.03
CPSF7-207ENST00000449811 AXDND1Q5T1B0 1012 aaPredicted RBP15.23■□□□□ 0.03
CPSF7-207ENST00000449811 FAM171A1Q5VUB5 890 aa15.23■□□□□ 0.03
CPSF7-207ENST00000449811 MOXD1Q6UVY6 613 aa15.23■□□□□ 0.03
CPSF7-207ENST00000449811 Q6ZUG5 572 aa15.23■□□□□ 0.03
CPSF7-207ENST00000449811 CELF5Q8N6W0 485 aaKnown RBP15.23■□□□□ 0.03
CPSF7-207ENST00000449811 ING5Q8WYH8 240 aa15.23■□□□□ 0.03
CPSF7-207ENST00000449811 MTRQ99707 1265 aa15.23■□□□□ 0.03
CPSF7-207ENST00000449811 PAAF1Q9BRP4 392 aa15.23■□□□□ 0.03
CPSF7-207ENST00000449811 SH3GLB2Q9NR46 395 aa15.23■□□□□ 0.03
CPSF7-207ENST00000449811 HCFC1R1Q9NWW0 138 aa15.23■□□□□ 0.03
CPSF7-207ENST00000449811 KLK14Q9P0G3 267 aa15.23■□□□□ 0.03
CPSF7-207ENST00000449811 PARP2Q9UGN5 583 aa15.23■□□□□ 0.03
CPSF7-207ENST00000449811 DDX25Q9UHL0 483 aaKnown RBP15.23■□□□□ 0.03
CPSF7-207ENST00000449811 VAV3Q9UKW4 847 aa15.23■□□□□ 0.03
CPSF7-207ENST00000449811 PCDHA4Q9UN74 947 aa15.23■□□□□ 0.03
CPSF7-207ENST00000449811 ZMYM2Q9UBW7 1377 aa15.23■□□□□ 0.03
CPSF7-207ENST00000449811 LRP3O75074 770 aa15.22■□□□□ 0.03
CPSF7-207ENST00000449811 TDGF1P13385 188 aa15.22■□□□□ 0.03
CPSF7-207ENST00000449811 CPA1P15085 419 aa15.22■□□□□ 0.03
CPSF7-207ENST00000449811 ARF4P18085 180 aaPredicted RBP15.22■□□□□ 0.03
CPSF7-207ENST00000449811 YWHABP31946 246 aaKnown RBP15.22■□□□□ 0.03
CPSF7-207ENST00000449811 MBTD1Q05BQ5 628 aa15.22■□□□□ 0.03
CPSF7-207ENST00000449811 TUSC3Q13454 348 aa15.22■□□□□ 0.03
CPSF7-207ENST00000449811 TFDP1Q14186 410 aa15.22■□□□□ 0.03
CPSF7-207ENST00000449811 MXD4Q14582 209 aaPredicted RBP15.22■□□□□ 0.03
CPSF7-207ENST00000449811 XKR9Q5GH70 373 aa15.22■□□□□ 0.03
CPSF7-207ENST00000449811 PRR23BQ6ZRT6 265 aa15.22■□□□□ 0.03
CPSF7-207ENST00000449811 OTUD6AQ7L8S5 288 aa15.22■□□□□ 0.03
CPSF7-207ENST00000449811 C4orf19Q8IY42 314 aa15.22■□□□□ 0.03
CPSF7-207ENST00000449811 LXNQ9BS40 222 aa15.22■□□□□ 0.03
CPSF7-207ENST00000449811 PLA2G2FQ9BZM2 168 aa15.22■□□□□ 0.03
CPSF7-207ENST00000449811 DNMT3BQ9UBC3 853 aaKnown RBP15.22■□□□□ 0.03
CPSF7-207ENST00000449811 NDRG2Q9UN36 371 aaKnown RBP15.22■□□□□ 0.03
CPSF7-207ENST00000449811 MRPS23Q9Y3D9 190 aaKnown RBP15.22■□□□□ 0.03
CPSF7-207ENST00000449811 CASTOR2A6NHX0 329 aa15.21■□□□□ 0.03
CPSF7-207ENST00000449811 SHISA7A6NL88 538 aa15.21■□□□□ 0.03
CPSF7-207ENST00000449811 ADAM12O43184 909 aa15.21■□□□□ 0.03
CPSF7-207ENST00000449811 SLC37A4O43826 429 aa15.21■□□□□ 0.03
CPSF7-207ENST00000449811 KIF4AO95239 1232 aa15.21■□□□□ 0.03
CPSF7-207ENST00000449811 NPTXRO95502 500 aa15.21■□□□□ 0.03
CPSF7-207ENST00000449811 RETP07949 1114 aa15.21■□□□□ 0.03
CPSF7-207ENST00000449811 IFNAR1P17181 557 aa15.21■□□□□ 0.03
CPSF7-207ENST00000449811 AMHR2Q16671 573 aa15.21■□□□□ 0.03
CPSF7-207ENST00000449811 UVSSAQ2YD98 709 aa15.21■□□□□ 0.03
CPSF7-207ENST00000449811 PDXDC1Q6P996 788 aa15.21■□□□□ 0.03
CPSF7-207ENST00000449811 SLC27A1Q6PCB7 646 aa15.21■□□□□ 0.03
CPSF7-207ENST00000449811 CDR2LQ86X02 465 aaPredicted RBP15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms