RNA–Protein interactions for RNA: ENST00000449476.6

CTC1-202, Transcript of CST telomere replication complex component 1, humanhuman

TSL 2

Gene CTC1, Length 4,797 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-202ENST00000449476 ZIM3Q96PE6 472 aa11.05□□□□□ -0.64
CTC1-202ENST00000449476 TRIM56Q9BRZ2 755 aaKnown RBP11.05□□□□□ -0.64
CTC1-202ENST00000449476 NOP53Q9NZM5 478 aaKnown RBP11.05□□□□□ -0.64
CTC1-202ENST00000449476 EPS15L1Q9UBC2 864 aa11.05□□□□□ -0.64
CTC1-202ENST00000449476 NAGPAQ9UK23 515 aa11.05□□□□□ -0.64
CTC1-202ENST00000449476 FNDC3AQ9Y2H6 1198 aaKnown RBP11.05□□□□□ -0.64
CTC1-202ENST00000449476 H0Y3Z8 333 aa11.04□□□□□ -0.64
CTC1-202ENST00000449476 H2AFXP16104 143 aaPredicted RBP11.04□□□□□ -0.64
CTC1-202ENST00000449476 ARPP19P56211 112 aa11.04□□□□□ -0.64
CTC1-202ENST00000449476 CEP120Q8N960 986 aa11.04□□□□□ -0.64
CTC1-202ENST00000449476 CCT8L2Q96SF2 557 aa11.04□□□□□ -0.64
CTC1-202ENST00000449476 PPP1R9AQ9ULJ8 1098 aa11.04□□□□□ -0.64
CTC1-202ENST00000449476 NWD1Q149M9 1564 aa11.04□□□□□ -0.64
CTC1-202ENST00000449476 KIF3CO14782 793 aa11.04□□□□□ -0.64
CTC1-202ENST00000449476 EIF3HO15372 352 aaKnown RBP eCLIP11.04□□□□□ -0.64
CTC1-202ENST00000449476 MED24O75448 989 aa11.04□□□□□ -0.64
CTC1-202ENST00000449476 ATP5HO75947 161 aa11.04□□□□□ -0.64
CTC1-202ENST00000449476 KRT3P12035 628 aa11.04□□□□□ -0.64
CTC1-202ENST00000449476 COMTP21964 271 aa11.04□□□□□ -0.64
CTC1-202ENST00000449476 TAP1Q03518 808 aa11.04□□□□□ -0.64
CTC1-202ENST00000449476 TRAPPC11Q7Z392 1133 aa11.04□□□□□ -0.64
CTC1-202ENST00000449476 SRLQ86TD4 932 aa11.04□□□□□ -0.64
CTC1-202ENST00000449476 ZC3H18Q86VM9 953 aaKnown RBP11.04□□□□□ -0.64
CTC1-202ENST00000449476 ATP6V1E2Q96A05 226 aa11.04□□□□□ -0.64
CTC1-202ENST00000449476 KCNH7Q9NS40 1196 aa11.04□□□□□ -0.64
CTC1-202ENST00000449476 KLHL11Q9NVR0 708 aa11.04□□□□□ -0.64
CTC1-202ENST00000449476 CAPN6Q9Y6Q1 641 aa11.04□□□□□ -0.64
CTC1-202ENST00000449476 GOLGA8CPA6NN73 597 aa11.04□□□□□ -0.64
CTC1-202ENST00000449476 CFLARO15519 480 aa11.04□□□□□ -0.64
CTC1-202ENST00000449476 HSPA4LO95757 839 aa11.04□□□□□ -0.64
CTC1-202ENST00000449476 PRKCBP05771 671 aa11.04□□□□□ -0.64
CTC1-202ENST00000449476 STAT4Q14765 748 aa11.04□□□□□ -0.64
CTC1-202ENST00000449476 RSBN1LQ6PCB5 846 aaPredicted RBP11.04□□□□□ -0.64
CTC1-202ENST00000449476 JAMLQ86YT9 394 aa11.04□□□□□ -0.64
CTC1-202ENST00000449476 MYLK4Q86YV6 388 aaPredicted RBP11.04□□□□□ -0.64
CTC1-202ENST00000449476 TTC39CQ8N584 583 aa11.04□□□□□ -0.64
CTC1-202ENST00000449476 SKA2Q8WVK7 121 aaPredicted RBP11.04□□□□□ -0.64
CTC1-202ENST00000449476 AGBL1Q96MI9 1066 aa11.04□□□□□ -0.64
CTC1-202ENST00000449476 FUT8Q9BYC5 575 aa11.04□□□□□ -0.64
CTC1-202ENST00000449476 CELF4Q9BZC1 486 aaKnown RBP11.04□□□□□ -0.64
CTC1-202ENST00000449476 EPN3Q9H201 632 aa11.04□□□□□ -0.64
CTC1-202ENST00000449476 SEMA6BQ9H3T3 888 aa11.04□□□□□ -0.64
CTC1-202ENST00000449476 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.04□□□□□ -0.64
CTC1-202ENST00000449476 SALL1Q9NSC2 1324 aa11.04□□□□□ -0.64
CTC1-202ENST00000449476 RSPH10B2B2RC85 870 aa11.04□□□□□ -0.64
CTC1-202ENST00000449476 SPAG7O75391 227 aa11.04□□□□□ -0.64
CTC1-202ENST00000449476 TTC4O95801 387 aa11.04□□□□□ -0.64
CTC1-202ENST00000449476 AGTP01019 485 aa11.04□□□□□ -0.64
CTC1-202ENST00000449476 RSPH10BP0C881 870 aa11.04□□□□□ -0.64
CTC1-202ENST00000449476 ROR1Q01973 937 aa11.04□□□□□ -0.64
CTC1-202ENST00000449476 HEATR6Q6AI08 1181 aaKnown RBP11.04□□□□□ -0.64
CTC1-202ENST00000449476 LRIG3Q6UXM1 1119 aa11.04□□□□□ -0.64
CTC1-202ENST00000449476 C18orf8Q96DM3 657 aa11.04□□□□□ -0.64
CTC1-202ENST00000449476 C9orf72Q96LT7 481 aa11.04□□□□□ -0.64
CTC1-202ENST00000449476 TRAIPQ9BWF2 469 aa11.04□□□□□ -0.64
CTC1-202ENST00000449476 RTFDC1Q9BY42 306 aaPredicted RBP11.04□□□□□ -0.64
CTC1-202ENST00000449476 TMEM117Q9H0C3 514 aa11.04□□□□□ -0.64
CTC1-202ENST00000449476 ETNK1Q9HBU6 452 aa11.04□□□□□ -0.64
CTC1-202ENST00000449476 AGPAT3Q9NRZ7 376 aa11.04□□□□□ -0.64
CTC1-202ENST00000449476 POLLQ9UGP5 575 aa11.04□□□□□ -0.64
CTC1-202ENST00000449476 ZFP69BQ9UJL9 534 aa11.04□□□□□ -0.64
CTC1-202ENST00000449476 ATP8B3O60423 1300 aa11.04□□□□□ -0.64
CTC1-202ENST00000449476 MEFVO15553 781 aaPredicted RBP11.03□□□□□ -0.64
CTC1-202ENST00000449476 NCOA4Q13772 614 aa11.03□□□□□ -0.64
CTC1-202ENST00000449476 VPS39Q96JC1 886 aa11.03□□□□□ -0.64
CTC1-202ENST00000449476 VPS11Q9H270 941 aa11.03□□□□□ -0.64
CTC1-202ENST00000449476 DHX35Q9H5Z1 703 aaKnown RBP11.03□□□□□ -0.64
CTC1-202ENST00000449476 FBXO28Q9NVF7 368 aa11.03□□□□□ -0.64
CTC1-202ENST00000449476 FGFR1OP2Q9NVK5 253 aa11.03□□□□□ -0.64
CTC1-202ENST00000449476 STAP1Q9ULZ2 295 aa11.03□□□□□ -0.64
CTC1-202ENST00000449476 PCDHB2Q9Y5E7 798 aa11.03□□□□□ -0.64
CTC1-202ENST00000449476 HSPA9P38646 679 aaKnown RBP11.03□□□□□ -0.64
CTC1-202ENST00000449476 PLA2G4AP47712 749 aa11.03□□□□□ -0.64
CTC1-202ENST00000449476 KCNJ1P48048 391 aa11.03□□□□□ -0.64
CTC1-202ENST00000449476 IRAK1P51617 712 aa11.03□□□□□ -0.64
CTC1-202ENST00000449476 ART3Q13508 389 aa11.03□□□□□ -0.64
CTC1-202ENST00000449476 HIF1AQ16665 826 aa11.03□□□□□ -0.64
CTC1-202ENST00000449476 TAF1BQ53T94 588 aaPredicted RBP11.03□□□□□ -0.64
CTC1-202ENST00000449476 ICE2Q659A1 982 aa11.03□□□□□ -0.64
CTC1-202ENST00000449476 RBBP8NLQ8NC74 664 aaPredicted RBP11.03□□□□□ -0.64
CTC1-202ENST00000449476 TMEM39BQ9GZU3 492 aa11.03□□□□□ -0.64
CTC1-202ENST00000449476 SUCLA2Q9P2R7 463 aaPredicted RBP11.03□□□□□ -0.64
CTC1-202ENST00000449476 A8MXQ7 604 aa11.03□□□□□ -0.64
CTC1-202ENST00000449476 ATMINO43313 823 aaPredicted RBP11.03□□□□□ -0.64
CTC1-202ENST00000449476 HAUS5O94927 633 aa11.03□□□□□ -0.64
CTC1-202ENST00000449476 ITIH2P19823 946 aa11.03□□□□□ -0.64
CTC1-202ENST00000449476 MKRN4PQ13434 485 aaPredicted RBP11.03□□□□□ -0.64
CTC1-202ENST00000449476 N4BP2L2Q92802 583 aaPredicted RBP11.03□□□□□ -0.64
CTC1-202ENST00000449476 ERP44Q9BS26 406 aa11.03□□□□□ -0.64
CTC1-202ENST00000449476 RUSC1Q9BVN2 902 aa11.03□□□□□ -0.64
CTC1-202ENST00000449476 ISCUQ9H1K1 167 aa11.03□□□□□ -0.64
CTC1-202ENST00000449476 MAP3K7O43318 606 aa11.03□□□□□ -0.64
CTC1-202ENST00000449476 CREB3O43889 395 aa11.03□□□□□ -0.64
CTC1-202ENST00000449476 CDH16O75309 829 aa11.03□□□□□ -0.64
CTC1-202ENST00000449476 SARSP49591 514 aaKnown RBP11.03□□□□□ -0.64
CTC1-202ENST00000449476 EN1Q05925 392 aaPredicted RBP11.03□□□□□ -0.64
CTC1-202ENST00000449476 SYDE1Q6ZW31 735 aaPredicted RBP11.03□□□□□ -0.64
CTC1-202ENST00000449476 MICALL2Q8IY33 904 aa11.03□□□□□ -0.64
CTC1-202ENST00000449476 RYBPQ8N488 228 aaPredicted RBP11.03□□□□□ -0.64
CTC1-202ENST00000449476 KIF12Q96FN5 646 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms