RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 NECAB2Q7Z6G3 386 aa20.95■□□□□ 0.94
RPS28-202ENST00000449223 ZBTB33Q86T24 672 aa20.95■□□□□ 0.94
RPS28-202ENST00000449223 CDR2LQ86X02 465 aaPredicted RBP20.95■□□□□ 0.94
RPS28-202ENST00000449223 TRAIPQ9BWF2 469 aa20.95■□□□□ 0.94
RPS28-202ENST00000449223 AGO3Q9H9G7 860 aaKnown RBP20.95■□□□□ 0.94
RPS28-202ENST00000449223 RBAKQ9NYW8 714 aaPredicted RBP20.95■□□□□ 0.94
RPS28-202ENST00000449223 ST3GAL5Q9UNP4 418 aa20.95■□□□□ 0.94
RPS28-202ENST00000449223 PIN4Q9Y237 131 aaKnown RBP20.95■□□□□ 0.94
RPS28-202ENST00000449223 ITIH6Q6UXX5 1313 aa20.95■□□□□ 0.94
RPS28-202ENST00000449223 CITO14578 2027 aa20.95■□□□□ 0.94
RPS28-202ENST00000449223 UBXN1Q04323 297 aa20.94■□□□□ 0.94
RPS28-202ENST00000449223 TLE2Q04725 743 aa20.94■□□□□ 0.94
RPS28-202ENST00000449223 FAAP100Q0VG06 881 aa20.94■□□□□ 0.94
RPS28-202ENST00000449223 TRIM60Q495X7 471 aa20.94■□□□□ 0.94
RPS28-202ENST00000449223 LRRC8DQ7L1W4 858 aa20.94■□□□□ 0.94
RPS28-202ENST00000449223 PADI3Q9ULW8 664 aa20.94■□□□□ 0.94
RPS28-202ENST00000449223 P4HA2O15460 535 aa20.94■□□□□ 0.94
RPS28-202ENST00000449223 STX10O60499 249 aa20.94■□□□□ 0.94
RPS28-202ENST00000449223 CLTAP09496 248 aa20.94■□□□□ 0.94
RPS28-202ENST00000449223 GTF2H1P32780 548 aa20.94■□□□□ 0.94
RPS28-202ENST00000449223 GRM5P41594 1212 aa20.94■□□□□ 0.94
RPS28-202ENST00000449223 MBTPS1Q14703 1052 aa20.94■□□□□ 0.94
RPS28-202ENST00000449223 DCAF17Q5H9S7 520 aaPredicted RBP20.94■□□□□ 0.94
RPS28-202ENST00000449223 UBXN11Q5T124 520 aa20.94■□□□□ 0.94
RPS28-202ENST00000449223 FKBP15Q5T1M5 1219 aa20.94■□□□□ 0.94
RPS28-202ENST00000449223 CEP120Q8N960 986 aa20.94■□□□□ 0.94
RPS28-202ENST00000449223 TBX21Q9UL17 535 aa20.94■□□□□ 0.94
RPS28-202ENST00000449223 PARNO95453 639 aaKnown RBP20.93■□□□□ 0.94
RPS28-202ENST00000449223 GHRP10912 638 aa20.93■□□□□ 0.94
RPS28-202ENST00000449223 HARSP12081 509 aaKnown RBP20.93■□□□□ 0.94
RPS28-202ENST00000449223 TNFSF9P41273 254 aa20.93■□□□□ 0.94
RPS28-202ENST00000449223 FMO5P49326 533 aa20.93■□□□□ 0.94
RPS28-202ENST00000449223 DLG4P78352 724 aa20.93■□□□□ 0.94
RPS28-202ENST00000449223 PAK2Q13177 524 aa20.93■□□□□ 0.94
RPS28-202ENST00000449223 SURF1Q15526 300 aa20.93■□□□□ 0.94
RPS28-202ENST00000449223 ENOX2Q16206 610 aaKnown RBP20.93■□□□□ 0.94
RPS28-202ENST00000449223 TCERG1LQ5VWI1 586 aa20.93■□□□□ 0.94
RPS28-202ENST00000449223 SPECC1LQ69YQ0 1117 aa20.93■□□□□ 0.94
RPS28-202ENST00000449223 OSBPL7Q9BZF2 842 aa20.93■□□□□ 0.94
RPS28-202ENST00000449223 LRRIQ3A6PVS8 624 aaPredicted RBP20.92■□□□□ 0.94
RPS28-202ENST00000449223 N4BP1O75113 896 aaKnown RBP20.92■□□□□ 0.94
RPS28-202ENST00000449223 STAG3L1P0CL83 205 aa20.92■□□□□ 0.94
RPS28-202ENST00000449223 CD52P31358 61 aa20.92■□□□□ 0.94
RPS28-202ENST00000449223 DSC3Q14574 896 aa20.92■□□□□ 0.94
RPS28-202ENST00000449223 THNSL1Q8IYQ7 743 aa20.92■□□□□ 0.94
RPS28-202ENST00000449223 EIF2AQ9BY44 585 aaKnown RBP20.92■□□□□ 0.94
RPS28-202ENST00000449223 IMPACTQ9P2X3 320 aa20.92■□□□□ 0.94
RPS28-202ENST00000449223 SIK3Q9Y2K2 1263 aa20.92■□□□□ 0.94
RPS28-202ENST00000449223 PES1O00541 588 aaKnown RBP20.91■□□□□ 0.94
RPS28-202ENST00000449223 IL18RAPO95256 599 aa20.91■□□□□ 0.94
RPS28-202ENST00000449223 NPTXRO95502 500 aa20.91■□□□□ 0.94
RPS28-202ENST00000449223 TRIM49P0CI25 452 aa20.91■□□□□ 0.94
RPS28-202ENST00000449223 TRIM49CP0CI26 452 aa20.91■□□□□ 0.94
RPS28-202ENST00000449223 PPP3CAQ08209 521 aa20.91■□□□□ 0.94
RPS28-202ENST00000449223 LRRC26Q2I0M4 334 aa20.91■□□□□ 0.94
RPS28-202ENST00000449223 SEZ6Q53EL9 994 aa20.91■□□□□ 0.94
RPS28-202ENST00000449223 HIPK3Q9H422 1215 aa20.91■□□□□ 0.94
RPS28-202ENST00000449223 ASB7Q9H672 318 aa20.91■□□□□ 0.94
RPS28-202ENST00000449223 AP3M2P53677 418 aa20.9■□□□□ 0.94
RPS28-202ENST00000449223 WNT7BP56706 349 aa20.9■□□□□ 0.94
RPS28-202ENST00000449223 NFX1Q12986 1120 aaKnown RBP20.9■□□□□ 0.94
RPS28-202ENST00000449223 GPNMBQ14956 572 aa20.9■□□□□ 0.94
RPS28-202ENST00000449223 CBWD6Q4V339 395 aa20.9■□□□□ 0.94
RPS28-202ENST00000449223 FIGNQ5HY92 759 aa20.9■□□□□ 0.94
RPS28-202ENST00000449223 CBWD3Q5JTY5 395 aa20.9■□□□□ 0.94
RPS28-202ENST00000449223 CBWD5Q5RIA9 395 aa20.9■□□□□ 0.94
RPS28-202ENST00000449223 C15orf39Q6ZRI6 1047 aa20.9■□□□□ 0.94
RPS28-202ENST00000449223 WDR49Q8IV35 697 aa20.9■□□□□ 0.94
RPS28-202ENST00000449223 CD302Q8IX05 232 aa20.9■□□□□ 0.94
RPS28-202ENST00000449223 TMEM192Q8IY95 271 aa20.9■□□□□ 0.94
RPS28-202ENST00000449223 CCDC127Q96BQ5 260 aa20.9■□□□□ 0.94
RPS28-202ENST00000449223 IQCDQ96DY2 449 aa20.9■□□□□ 0.94
RPS28-202ENST00000449223 FNBP1Q96RU3 617 aa20.9■□□□□ 0.94
RPS28-202ENST00000449223 CGRRF1Q99675 332 aa20.9■□□□□ 0.94
RPS28-202ENST00000449223 TMX1Q9H3N1 280 aa20.9■□□□□ 0.94
RPS28-202ENST00000449223 RPF1Q9H9Y2 349 aaKnown RBP20.9■□□□□ 0.94
RPS28-202ENST00000449223 PLEKHA5Q9HAU0 1116 aa20.9■□□□□ 0.94
RPS28-202ENST00000449223 TMEM8AQ9HCN3 771 aa20.9■□□□□ 0.94
RPS28-202ENST00000449223 PDE11AQ9HCR9 933 aa20.9■□□□□ 0.94
RPS28-202ENST00000449223 COQ4Q9Y3A0 265 aa20.9■□□□□ 0.94
RPS28-202ENST00000449223 PDCD11Q14690 1871 aaKnown RBP20.9■□□□□ 0.94
RPS28-202ENST00000449223 TTC26A0AVF1 554 aa20.89■□□□□ 0.94
RPS28-202ENST00000449223 MEFVO15553 781 aaPredicted RBP20.89■□□□□ 0.94
RPS28-202ENST00000449223 CLTBP09497 229 aa20.89■□□□□ 0.94
RPS28-202ENST00000449223 TBX2Q13207 712 aaPredicted RBP20.89■□□□□ 0.94
RPS28-202ENST00000449223 SYCP1Q15431 976 aa20.89■□□□□ 0.94
RPS28-202ENST00000449223 TWF2Q6IBS0 349 aaKnown RBP20.89■□□□□ 0.94
RPS28-202ENST00000449223 ACAP3Q96P50 834 aa20.89■□□□□ 0.94
RPS28-202ENST00000449223 CCDC94Q9BW85 323 aaPredicted RBP20.89■□□□□ 0.94
RPS28-202ENST00000449223 IFIH1Q9BYX4 1025 aaKnown RBP20.89■□□□□ 0.94
RPS28-202ENST00000449223 TRIM6Q9C030 488 aaPredicted RBP20.89■□□□□ 0.94
RPS28-202ENST00000449223 ZNF623O75123 536 aa20.88■□□□□ 0.93
RPS28-202ENST00000449223 CXCL8P10145 99 aa20.88■□□□□ 0.93
RPS28-202ENST00000449223 MXI1P50539 228 aa20.88■□□□□ 0.93
RPS28-202ENST00000449223 RAB27AP51159 221 aa20.88■□□□□ 0.93
RPS28-202ENST00000449223 KCNMA1Q12791 1236 aa20.88■□□□□ 0.93
RPS28-202ENST00000449223 SLC10A6Q3KNW5 377 aa20.88■□□□□ 0.93
RPS28-202ENST00000449223 KRT39Q6A163 491 aa20.88■□□□□ 0.93
RPS28-202ENST00000449223 NT5DC4Q86YG4 428 aa20.88■□□□□ 0.93
RPS28-202ENST00000449223 TSPAN18Q96SJ8 248 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms