RNA–Protein interactions for RNA: ENST00000449058.6

TOM1-210, Transcript of target of myb1 membrane trafficking protein, human

APPRIS P3 TSL 1 (best) BASIC

Gene TOM1, Length 2,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TOM1-210	ENST00000449058	NUDT17	P0C025	328 aa		18.19	■□□□□ 0.5
TOM1-210	ENST00000449058	PYGM	P11217	842 aa		18.19	■□□□□ 0.5
TOM1-210	ENST00000449058	PPP2R2A	P63151	447 aa		18.19	■□□□□ 0.5
TOM1-210	ENST00000449058	ENPEP	Q07075	957 aa		18.19	■□□□□ 0.5
TOM1-210	ENST00000449058	CYP24A1	Q07973	514 aa		18.19	■□□□□ 0.5
TOM1-210	ENST00000449058	CIAPIN1	Q6FI81	312 aa		18.19	■□□□□ 0.5
TOM1-210	ENST00000449058	MAGOHB	Q96A72	148 aa	Known RBP	18.19	■□□□□ 0.5
TOM1-210	ENST00000449058	TOPORS	Q9NS56	1045 aa	Predicted RBP	18.19	■□□□□ 0.5
TOM1-210	ENST00000449058	RAB20	Q9NX57	234 aa		18.19	■□□□□ 0.5
TOM1-210	ENST00000449058	NOVA2	Q9UNW9	492 aa	Known RBP	18.19	■□□□□ 0.5
TOM1-210	ENST00000449058	SNX24	Q9Y343	169 aa		18.19	■□□□□ 0.5
TOM1-210	ENST00000449058	CTDP1	Q9Y5B0	961 aa	Predicted RBP	18.19	■□□□□ 0.5
TOM1-210	ENST00000449058	DOCK1	Q14185	1865 aa		18.19	■□□□□ 0.5
TOM1-210	ENST00000449058	PODXL	O00592	558 aa		18.19	■□□□□ 0.5
TOM1-210	ENST00000449058	ZNF862	O60290	1169 aa		18.19	■□□□□ 0.5
TOM1-210	ENST00000449058	GRIN3B	O60391	1043 aa		18.19	■□□□□ 0.5
TOM1-210	ENST00000449058	CCND2	P30279	289 aa		18.19	■□□□□ 0.5
TOM1-210	ENST00000449058	GBP1	P32455	592 aa		18.19	■□□□□ 0.5
TOM1-210	ENST00000449058	EN1	Q05925	392 aa	Predicted RBP	18.19	■□□□□ 0.5
TOM1-210	ENST00000449058	TNFAIP1	Q13829	316 aa		18.19	■□□□□ 0.5
TOM1-210	ENST00000449058	KRT71	Q3SY84	523 aa		18.19	■□□□□ 0.5
TOM1-210	ENST00000449058	OTUD6A	Q7L8S5	288 aa		18.19	■□□□□ 0.5
TOM1-210	ENST00000449058	NLRX1	Q86UT6	975 aa		18.19	■□□□□ 0.5
TOM1-210	ENST00000449058	TLCD1	Q96CP7	247 aa		18.19	■□□□□ 0.5
TOM1-210	ENST00000449058	LRRC4C	Q9HCJ2	640 aa		18.19	■□□□□ 0.5
TOM1-210	ENST00000449058	BCCIP	Q9P287	314 aa	Known RBP eCLIP	18.19	■□□□□ 0.5
TOM1-210	ENST00000449058	PDE6C	P51160	858 aa		18.18	■□□□□ 0.5
TOM1-210	ENST00000449058	ZNF280A	P59817	542 aa	Predicted RBP	18.18	■□□□□ 0.5
TOM1-210	ENST00000449058	BAAT	Q14032	418 aa	Predicted RBP	18.18	■□□□□ 0.5
TOM1-210	ENST00000449058	SLC13A5	Q86YT5	568 aa	Predicted RBP	18.18	■□□□□ 0.5
TOM1-210	ENST00000449058	FBXO25	Q8TCJ0	367 aa		18.18	■□□□□ 0.5
TOM1-210	ENST00000449058	ZNF653	Q96CK0	615 aa		18.18	■□□□□ 0.5
TOM1-210	ENST00000449058	WNK4	Q96J92	1243 aa		18.18	■□□□□ 0.5
TOM1-210	ENST00000449058	PABPC3	Q9H361	631 aa	Known RBP	18.18	■□□□□ 0.5
TOM1-210	ENST00000449058	PDLIM7	Q9NR12	457 aa		18.18	■□□□□ 0.5
TOM1-210	ENST00000449058	RNF146	Q9NTX7	359 aa		18.18	■□□□□ 0.5
TOM1-210	ENST00000449058	CNOT8	Q9UFF9	292 aa	Known RBP	18.18	■□□□□ 0.5
TOM1-210	ENST00000449058	RIPK3	Q9Y572	518 aa		18.18	■□□□□ 0.5
TOM1-210	ENST00000449058	ADGRA3	Q8IWK6	1321 aa		18.18	■□□□□ 0.5
TOM1-210	ENST00000449058	MAFG	O15525	162 aa		18.18	■□□□□ 0.5
TOM1-210	ENST00000449058	EGFR	P00533	1210 aa		18.18	■□□□□ 0.5
TOM1-210	ENST00000449058	PAEP	P09466	180 aa		18.18	■□□□□ 0.5
TOM1-210	ENST00000449058	PMS2	P54278	862 aa		18.18	■□□□□ 0.5
TOM1-210	ENST00000449058	PLTP	P55058	493 aa		18.18	■□□□□ 0.5
TOM1-210	ENST00000449058	SIX1	Q15475	284 aa	Predicted RBP	18.18	■□□□□ 0.5
TOM1-210	ENST00000449058	POTEA	Q6S8J7	498 aa		18.18	■□□□□ 0.5
TOM1-210	ENST00000449058	SV2A	Q7L0J3	742 aa		18.18	■□□□□ 0.5
TOM1-210	ENST00000449058	USP37	Q86T82	979 aa		18.18	■□□□□ 0.5
TOM1-210	ENST00000449058	CPNE8	Q86YQ8	564 aa		18.18	■□□□□ 0.5
TOM1-210	ENST00000449058	ATG4C	Q96DT6	458 aa		18.18	■□□□□ 0.5
TOM1-210	ENST00000449058	BTBD6	Q96KE9	485 aa		18.18	■□□□□ 0.5
TOM1-210	ENST00000449058	CEP170P1	Q96L14	293 aa		18.18	■□□□□ 0.5
TOM1-210	ENST00000449058	GABBR1	Q9UBS5	961 aa		18.18	■□□□□ 0.5
TOM1-210	ENST00000449058	GGA2	Q9UJY4	613 aa		18.18	■□□□□ 0.5
TOM1-210	ENST00000449058	DOCK5	Q9H7D0	1870 aa		18.18	■□□□□ 0.5
TOM1-210	ENST00000449058	DCDC2C	A8MYV0	355 aa		18.17	■□□□□ 0.5
TOM1-210	ENST00000449058	NR3C2	P08235	984 aa		18.17	■□□□□ 0.5
TOM1-210	ENST00000449058	RPL21	P46778	160 aa	Known RBP	18.17	■□□□□ 0.5
TOM1-210	ENST00000449058	SOX10	P56693	466 aa		18.17	■□□□□ 0.5
TOM1-210	ENST00000449058	RTP1	P59025	263 aa		18.17	■□□□□ 0.5
TOM1-210	ENST00000449058	ACAD10	Q6JQN1	1059 aa		18.17	■□□□□ 0.5
TOM1-210	ENST00000449058	CCDC137	Q6PK04	289 aa	Known RBP	18.17	■□□□□ 0.5
TOM1-210	ENST00000449058	C3orf20	Q8ND61	904 aa		18.17	■□□□□ 0.5
TOM1-210	ENST00000449058	POMGNT1	Q8WZA1	660 aa		18.17	■□□□□ 0.5
TOM1-210	ENST00000449058	TCRBV7S2A1N4T	A0A589	114 aa		18.17	■□□□□ 0.5
TOM1-210	ENST00000449058		E7EVH7	732 aa		18.17	■□□□□ 0.5
TOM1-210	ENST00000449058	SPOP	O43791	374 aa		18.17	■□□□□ 0.5
TOM1-210	ENST00000449058	KCNA2	P16389	499 aa		18.17	■□□□□ 0.5
TOM1-210	ENST00000449058	GART	P22102	1010 aa		18.17	■□□□□ 0.5
TOM1-210	ENST00000449058	MAGOH	P61326	146 aa	Known RBP	18.17	■□□□□ 0.5
TOM1-210	ENST00000449058	IFFO1	Q0D2I5	559 aa		18.17	■□□□□ 0.5
TOM1-210	ENST00000449058	PACS2	Q86VP3	889 aa		18.17	■□□□□ 0.5
TOM1-210	ENST00000449058	GPD1L	Q8N335	351 aa		18.17	■□□□□ 0.5
TOM1-210	ENST00000449058	C12orf50	Q8NA57	414 aa	Predicted RBP	18.17	■□□□□ 0.5
TOM1-210	ENST00000449058	DHX38	Q92620	1227 aa	Known RBP	18.17	■□□□□ 0.5
TOM1-210	ENST00000449058	ATP6V0A1	Q93050	837 aa		18.17	■□□□□ 0.5
TOM1-210	ENST00000449058	TATDN2	Q93075	761 aa		18.17	■□□□□ 0.5
TOM1-210	ENST00000449058	RUNDC3B	Q96NL0	473 aa		18.17	■□□□□ 0.5
TOM1-210	ENST00000449058	PARP2	Q9UGN5	583 aa		18.17	■□□□□ 0.5
TOM1-210	ENST00000449058	TRAPPC3	O43617	180 aa		18.16	■□□□□ 0.5
TOM1-210	ENST00000449058	GCNT1	Q02742	428 aa		18.16	■□□□□ 0.5
TOM1-210	ENST00000449058	CLEC16A	Q2KHT3	1053 aa		18.16	■□□□□ 0.5
TOM1-210	ENST00000449058	TTC31	Q49AM3	519 aa	Predicted RBP	18.16	■□□□□ 0.5
TOM1-210	ENST00000449058	BRDT	Q58F21	947 aa	Predicted RBP	18.16	■□□□□ 0.5
TOM1-210	ENST00000449058	ODF2	Q5BJF6	829 aa		18.16	■□□□□ 0.5
TOM1-210	ENST00000449058	ENOSF1	Q7L5Y1	443 aa		18.16	■□□□□ 0.5
TOM1-210	ENST00000449058	YTHDF3	Q7Z739	585 aa	Known RBP	18.16	■□□□□ 0.5
TOM1-210	ENST00000449058	HOOK3	Q86VS8	718 aa		18.16	■□□□□ 0.5
TOM1-210	ENST00000449058	REPS2	Q8NFH8	660 aa		18.16	■□□□□ 0.5
TOM1-210	ENST00000449058	RNF25	Q96BH1	459 aa	Predicted RBP	18.16	■□□□□ 0.5
TOM1-210	ENST00000449058	MTUS1	Q9ULD2	1270 aa		18.16	■□□□□ 0.5
TOM1-210	ENST00000449058	PHIP	Q8WWQ0	1821 aa		18.16	■□□□□ 0.5
TOM1-210	ENST00000449058	GMNC	A6NCL1	334 aa		18.16	■□□□□ 0.5
TOM1-210	ENST00000449058	MEFV	O15553	781 aa	Predicted RBP	18.16	■□□□□ 0.5
TOM1-210	ENST00000449058	DKC1	O60832	514 aa	Known RBP eCLIP	18.16	■□□□□ 0.5
TOM1-210	ENST00000449058	ZC3H11A	O75152	810 aa	Known RBP eCLIP	18.16	■□□□□ 0.5
TOM1-210	ENST00000449058	SHBG	P04278	402 aa		18.16	■□□□□ 0.5
TOM1-210	ENST00000449058	TMOD1	P28289	359 aa		18.16	■□□□□ 0.5
TOM1-210	ENST00000449058	COIL	P38432	576 aa	Predicted RBP	18.16	■□□□□ 0.5
TOM1-210	ENST00000449058	RWDD2B	P57060	319 aa		18.16	■□□□□ 0.5

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