RNA–Protein interactions for RNA: ENST00000448935.6

VIPAS39-203, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-203ENST00000448935 MATR3P43243 847 aaKnown RBP eCLIP11.43□□□□□ -0.58
VIPAS39-203ENST00000448935 GPC3P51654 580 aa11.43□□□□□ -0.58
VIPAS39-203ENST00000448935 MFAP3P55082 362 aa11.43□□□□□ -0.58
VIPAS39-203ENST00000448935 POU5F1BQ06416 359 aa11.43□□□□□ -0.58
VIPAS39-203ENST00000448935 NCBP1Q09161 790 aaKnown RBP11.43□□□□□ -0.58
VIPAS39-203ENST00000448935 LAMTOR4Q0VGL1 99 aa11.43□□□□□ -0.58
VIPAS39-203ENST00000448935 MAPK6Q16659 721 aa11.43□□□□□ -0.58
VIPAS39-203ENST00000448935 PAPD7Q5XG87 772 aaKnown RBP11.43□□□□□ -0.58
VIPAS39-203ENST00000448935 RGMBQ6NW40 437 aa11.43□□□□□ -0.58
VIPAS39-203ENST00000448935 ENOSF1Q7L5Y1 443 aa11.43□□□□□ -0.58
VIPAS39-203ENST00000448935 ZNF571Q7Z3V5 609 aaPredicted RBP11.43□□□□□ -0.58
VIPAS39-203ENST00000448935 TRIM50Q86XT4 487 aa11.43□□□□□ -0.58
VIPAS39-203ENST00000448935 RASAL3Q86YV0 1011 aa11.43□□□□□ -0.58
VIPAS39-203ENST00000448935 ANKRD7Q92527 254 aa11.43□□□□□ -0.58
VIPAS39-203ENST00000448935 GLMNQ92990 594 aa11.43□□□□□ -0.58
VIPAS39-203ENST00000448935 CCDC127Q96BQ5 260 aa11.43□□□□□ -0.58
VIPAS39-203ENST00000448935 MSTO1Q9BUK6 570 aa11.43□□□□□ -0.58
VIPAS39-203ENST00000448935 SUGCTQ9HAC7 445 aa11.43□□□□□ -0.58
VIPAS39-203ENST00000448935 UBE2TQ9NPD8 197 aaPredicted RBP11.43□□□□□ -0.58
VIPAS39-203ENST00000448935 TSKSQ9UJT2 592 aa11.43□□□□□ -0.58
VIPAS39-203ENST00000448935 A0A0B4J269 797 aa11.42□□□□□ -0.58
VIPAS39-203ENST00000448935 CLDN3O15551 220 aa11.42□□□□□ -0.58
VIPAS39-203ENST00000448935 SNAI1O95863 264 aaPredicted RBP11.42□□□□□ -0.58
VIPAS39-203ENST00000448935 TMOD1P28289 359 aa11.42□□□□□ -0.58
VIPAS39-203ENST00000448935 AP3M2P53677 418 aa11.42□□□□□ -0.58
VIPAS39-203ENST00000448935 CLDN10P78369 228 aa11.42□□□□□ -0.58
VIPAS39-203ENST00000448935 MAP2K1Q02750 393 aaPredicted RBP11.42□□□□□ -0.58
VIPAS39-203ENST00000448935 CKAP4Q07065 602 aaKnown RBP11.42□□□□□ -0.58
VIPAS39-203ENST00000448935 ACVR2BQ13705 512 aa11.42□□□□□ -0.58
VIPAS39-203ENST00000448935 KIF22Q14807 665 aa11.42□□□□□ -0.58
VIPAS39-203ENST00000448935 SURF1Q15526 300 aa11.42□□□□□ -0.58
VIPAS39-203ENST00000448935 TAF1CQ15572 869 aaPredicted RBP11.42□□□□□ -0.58
VIPAS39-203ENST00000448935 ENOX2Q16206 610 aaKnown RBP11.42□□□□□ -0.58
VIPAS39-203ENST00000448935 KIAA0753Q2KHM9 967 aa11.42□□□□□ -0.58
VIPAS39-203ENST00000448935 DUSP28Q4G0W2 176 aa11.42□□□□□ -0.58
VIPAS39-203ENST00000448935 PHLDB3Q6NSJ2 640 aa11.42□□□□□ -0.58
VIPAS39-203ENST00000448935 ALKBH5Q6P6C2 394 aaKnown RBP11.42□□□□□ -0.58
VIPAS39-203ENST00000448935 GJB7Q6PEY0 223 aa11.42□□□□□ -0.58
VIPAS39-203ENST00000448935 SRGAP1Q7Z6B7 1085 aa11.42□□□□□ -0.58
VIPAS39-203ENST00000448935 PLEKHO2Q8TD55 490 aa11.42□□□□□ -0.58
VIPAS39-203ENST00000448935 GOLGA1Q92805 767 aa11.42□□□□□ -0.58
VIPAS39-203ENST00000448935 NT5C1BQ96P26 610 aa11.42□□□□□ -0.58
VIPAS39-203ENST00000448935 NFKBIZQ9BYH8 718 aa11.42□□□□□ -0.58
VIPAS39-203ENST00000448935 KATNBL1Q9H079 304 aa11.42□□□□□ -0.58
VIPAS39-203ENST00000448935 RAB20Q9NX57 234 aa11.42□□□□□ -0.58
VIPAS39-203ENST00000448935 SUCLA2Q9P2R7 463 aaPredicted RBP11.42□□□□□ -0.58
VIPAS39-203ENST00000448935 NAGPAQ9UK23 515 aa11.42□□□□□ -0.58
VIPAS39-203ENST00000448935 SAR1BQ9Y6B6 198 aa11.42□□□□□ -0.58
VIPAS39-203ENST00000448935 ZBTB42B2RXF5 422 aa11.42□□□□□ -0.58
VIPAS39-203ENST00000448935 TADA3O75528 432 aa11.42□□□□□ -0.58
VIPAS39-203ENST00000448935 TOM1L1O75674 476 aa11.42□□□□□ -0.58
VIPAS39-203ENST00000448935 PRKCBP05771 671 aa11.42□□□□□ -0.58
VIPAS39-203ENST00000448935 PRLRP16471 622 aa11.42□□□□□ -0.58
VIPAS39-203ENST00000448935 ADCYAP1R1P41586 468 aa11.42□□□□□ -0.58
VIPAS39-203ENST00000448935 NAP1L1P55209 391 aaKnown RBP11.42□□□□□ -0.58
VIPAS39-203ENST00000448935 GRM1Q13255 1194 aa11.42□□□□□ -0.58
VIPAS39-203ENST00000448935 ARHGAP44Q17R89 818 aa11.42□□□□□ -0.58
VIPAS39-203ENST00000448935 EFCAB12Q6NXP0 572 aa11.42□□□□□ -0.58
VIPAS39-203ENST00000448935 TRAPPC11Q7Z392 1133 aa11.42□□□□□ -0.58
VIPAS39-203ENST00000448935 RNF149Q8NC42 400 aa11.42□□□□□ -0.58
VIPAS39-203ENST00000448935 ZSWIM2Q8NEG5 633 aa11.42□□□□□ -0.58
VIPAS39-203ENST00000448935 RPGRIP1Q96KN7 1286 aa11.42□□□□□ -0.58
VIPAS39-203ENST00000448935 TARS2Q9BW92 718 aaKnown RBP11.42□□□□□ -0.58
VIPAS39-203ENST00000448935 CCDC113Q9H0I3 377 aa11.42□□□□□ -0.58
VIPAS39-203ENST00000448935 RBAKQ9NYW8 714 aaPredicted RBP11.42□□□□□ -0.58
VIPAS39-203ENST00000448935 AJAP1Q9UKB5 411 aaPredicted RBP11.42□□□□□ -0.58
VIPAS39-203ENST00000448935 ADGRA2Q96PE1 1338 aa11.42□□□□□ -0.58
VIPAS39-203ENST00000448935 ZSWIM8A7E2V4 1837 aa11.41□□□□□ -0.58
VIPAS39-203ENST00000448935 A0A0A6YYK5 440 aaPredicted RBP11.41□□□□□ -0.58
VIPAS39-203ENST00000448935 C22orf31O95567 290 aa11.41□□□□□ -0.58
VIPAS39-203ENST00000448935 HOXC6P09630 235 aa11.41□□□□□ -0.58
VIPAS39-203ENST00000448935 H2AFZP0C0S5 128 aa11.41□□□□□ -0.58
VIPAS39-203ENST00000448935 SRGAP2CP0DJJ0 459 aa11.41□□□□□ -0.58
VIPAS39-203ENST00000448935 DLATP10515 647 aaKnown RBP11.41□□□□□ -0.58
VIPAS39-203ENST00000448935 HOXD8P13378 290 aaPredicted RBP11.41□□□□□ -0.58
VIPAS39-203ENST00000448935 TCP1P17987 556 aaKnown RBP11.41□□□□□ -0.58
VIPAS39-203ENST00000448935 TNNI1P19237 187 aa11.41□□□□□ -0.58
VIPAS39-203ENST00000448935 TNFAIP3P21580 790 aa11.41□□□□□ -0.58
VIPAS39-203ENST00000448935 PHKA2P46019 1235 aa11.41□□□□□ -0.58
VIPAS39-203ENST00000448935 AMPD2Q01433 879 aa11.41□□□□□ -0.58
VIPAS39-203ENST00000448935 SREBF2Q12772 1141 aa11.41□□□□□ -0.58
VIPAS39-203ENST00000448935 DGKDQ16760 1214 aa11.41□□□□□ -0.58
VIPAS39-203ENST00000448935 WDR44Q5JSH3 913 aa11.41□□□□□ -0.58
VIPAS39-203ENST00000448935 MORN1Q5T089 497 aa11.41□□□□□ -0.58
VIPAS39-203ENST00000448935 H2AFVQ71UI9 128 aa11.41□□□□□ -0.58
VIPAS39-203ENST00000448935 SV2AQ7L0J3 742 aa11.41□□□□□ -0.58
VIPAS39-203ENST00000448935 RHPN2Q8IUC4 686 aa11.41□□□□□ -0.58
VIPAS39-203ENST00000448935 LRRC71Q8N4P6 559 aa11.41□□□□□ -0.58
VIPAS39-203ENST00000448935 OR6J1Q8NGC5 347 aa11.41□□□□□ -0.58
VIPAS39-203ENST00000448935 AFG1LQ8WV93 481 aa11.41□□□□□ -0.58
VIPAS39-203ENST00000448935 LMBR1Q8WVP7 490 aa11.41□□□□□ -0.58
VIPAS39-203ENST00000448935 ADAM33Q9BZ11 813 aa11.41□□□□□ -0.58
VIPAS39-203ENST00000448935 GPR88Q9GZN0 384 aa11.41□□□□□ -0.58
VIPAS39-203ENST00000448935 ANKFY1Q9P2R3 1169 aa11.41□□□□□ -0.58
VIPAS39-203ENST00000448935 CPA4Q9UI42 421 aa11.41□□□□□ -0.58
VIPAS39-203ENST00000448935 ZHX1Q9UKY1 873 aaPredicted RBP11.41□□□□□ -0.58
VIPAS39-203ENST00000448935 TFR2Q9UP52 801 aa11.41□□□□□ -0.58
VIPAS39-203ENST00000448935 DUSP10Q9Y6W6 482 aa11.41□□□□□ -0.58
VIPAS39-203ENST00000448935 CTAGE15A4D2H0 777 aa11.4□□□□□ -0.58
VIPAS39-203ENST00000448935 ACKR2O00590 384 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms