RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 ARL2P36404 184 aa15.18■□□□□ 0.02
PDLIM2-213ENST00000448520 PRPHP41219 470 aa15.18■□□□□ 0.02
PDLIM2-213ENST00000448520 DSC1Q08554 894 aa15.18■□□□□ 0.02
PDLIM2-213ENST00000448520 AXDND1Q5T1B0 1012 aaPredicted RBP15.18■□□□□ 0.02
PDLIM2-213ENST00000448520 KIAA0319Q5VV43 1072 aa15.18■□□□□ 0.02
PDLIM2-213ENST00000448520 ASTLQ6HA08 431 aaPredicted RBP15.18■□□□□ 0.02
PDLIM2-213ENST00000448520 DTHD1Q6ZMT9 781 aa15.18■□□□□ 0.02
PDLIM2-213ENST00000448520 CLEC17AQ6ZS10 378 aa15.18■□□□□ 0.02
PDLIM2-213ENST00000448520 USP49Q70CQ1 688 aa15.18■□□□□ 0.02
PDLIM2-213ENST00000448520 CCDC43Q96MW1 224 aaKnown RBP15.18■□□□□ 0.02
PDLIM2-213ENST00000448520 HERC2P3Q9BVR0 1158 aa15.18■□□□□ 0.02
PDLIM2-213ENST00000448520 EIF2AQ9BY44 585 aaKnown RBP15.18■□□□□ 0.02
PDLIM2-213ENST00000448520 SCAND2PQ9GZW5 306 aaPredicted RBP15.18■□□□□ 0.02
PDLIM2-213ENST00000448520 MFSD1Q9H3U5 465 aa15.18■□□□□ 0.02
PDLIM2-213ENST00000448520 RXFP1Q9HBX9 757 aa15.18■□□□□ 0.02
PDLIM2-213ENST00000448520 RIF1Q5UIP0 2472 aaKnown RBP15.17■□□□□ 0.02
PDLIM2-213ENST00000448520 LAD1O00515 517 aa15.17■□□□□ 0.02
PDLIM2-213ENST00000448520 C2CD2LO14523 706 aa15.17■□□□□ 0.02
PDLIM2-213ENST00000448520 DSG1Q02413 1049 aa15.17■□□□□ 0.02
PDLIM2-213ENST00000448520 MBTD1Q05BQ5 628 aa15.17■□□□□ 0.02
PDLIM2-213ENST00000448520 TDGQ13569 410 aa15.17■□□□□ 0.02
PDLIM2-213ENST00000448520 ARL6IP4Q66PJ3 421 aaKnown RBP15.17■□□□□ 0.02
PDLIM2-213ENST00000448520 RNF168Q8IYW5 571 aaPredicted RBP15.17■□□□□ 0.02
PDLIM2-213ENST00000448520 KRI1Q8N9T8 703 aaKnown RBP15.17■□□□□ 0.02
PDLIM2-213ENST00000448520 KCNG4Q8TDN1 519 aa15.17■□□□□ 0.02
PDLIM2-213ENST00000448520 STAMQ92783 540 aa15.17■□□□□ 0.02
PDLIM2-213ENST00000448520 CPB2Q96IY4 423 aa15.17■□□□□ 0.02
PDLIM2-213ENST00000448520 RNF39Q9H2S5 420 aa15.17■□□□□ 0.02
PDLIM2-213ENST00000448520 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.17■□□□□ 0.02
PDLIM2-213ENST00000448520 MARCH5Q9NX47 278 aa15.17■□□□□ 0.02
PDLIM2-213ENST00000448520 MIOSQ9NXC5 875 aa15.17■□□□□ 0.02
PDLIM2-213ENST00000448520 IGSF9Q9P2J2 1179 aa15.17■□□□□ 0.02
PDLIM2-213ENST00000448520 PRG3Q9Y2Y8 225 aaPredicted RBP15.17■□□□□ 0.02
PDLIM2-213ENST00000448520 SRPRBQ9Y5M8 271 aaKnown RBP15.17■□□□□ 0.02
PDLIM2-213ENST00000448520 TDRD15B5MCY1 1934 aaKnown RBP15.17■□□□□ 0.02
PDLIM2-213ENST00000448520 MTCL1Q9Y4B5 1905 aaKnown RBP15.17■□□□□ 0.02
PDLIM2-213ENST00000448520 CCDC195A0A1B0GUA6 201 aa15.16■□□□□ 0.02
PDLIM2-213ENST00000448520 A0A1B0GUA9 196 aa15.16■□□□□ 0.02
PDLIM2-213ENST00000448520 PROB1E7EW31 1015 aa15.16■□□□□ 0.02
PDLIM2-213ENST00000448520 H0Y858 1186 aa15.16■□□□□ 0.02
PDLIM2-213ENST00000448520 TEX28O15482 410 aa15.16■□□□□ 0.02
PDLIM2-213ENST00000448520 CUTAO60888 179 aa15.16■□□□□ 0.02
PDLIM2-213ENST00000448520 PRPF40AO75400 957 aaKnown RBP15.16■□□□□ 0.02
PDLIM2-213ENST00000448520 EFEMP2O95967 443 aa15.16■□□□□ 0.02
PDLIM2-213ENST00000448520 GLUD1P00367 558 aa15.16■□□□□ 0.02
PDLIM2-213ENST00000448520 ARF4P18085 180 aaPredicted RBP15.16■□□□□ 0.02
PDLIM2-213ENST00000448520 GLRA2P23416 452 aa15.16■□□□□ 0.02
PDLIM2-213ENST00000448520 MLH1P40692 756 aa15.16■□□□□ 0.02
PDLIM2-213ENST00000448520 GLUD2P49448 558 aa15.16■□□□□ 0.02
PDLIM2-213ENST00000448520 RARRES1P49788 294 aa15.16■□□□□ 0.02
PDLIM2-213ENST00000448520 FXR2P51116 673 aaKnown RBP eCLIP15.16■□□□□ 0.02
PDLIM2-213ENST00000448520 CAPSQ13938 189 aa15.16■□□□□ 0.02
PDLIM2-213ENST00000448520 AMHR2Q16671 573 aa15.16■□□□□ 0.02
PDLIM2-213ENST00000448520 SHC4Q6S5L8 630 aa15.16■□□□□ 0.02
PDLIM2-213ENST00000448520 TAS1R1Q7RTX1 841 aa15.16■□□□□ 0.02
PDLIM2-213ENST00000448520 NXPE3Q969Y0 559 aa15.16■□□□□ 0.02
PDLIM2-213ENST00000448520 EPSTI1Q96J88 318 aa15.16■□□□□ 0.02
PDLIM2-213ENST00000448520 GBP4Q96PP9 640 aa15.16■□□□□ 0.02
PDLIM2-213ENST00000448520 PLEKHA4Q9H4M7 779 aa15.16■□□□□ 0.02
PDLIM2-213ENST00000448520 KCNK12Q9HB15 430 aa15.16■□□□□ 0.02
PDLIM2-213ENST00000448520 WDR6Q9NNW5 1121 aaKnown RBP15.16■□□□□ 0.02
PDLIM2-213ENST00000448520 MAN1C1Q9NR34 630 aa15.16■□□□□ 0.02
PDLIM2-213ENST00000448520 CHST7Q9NS84 486 aa15.16■□□□□ 0.02
PDLIM2-213ENST00000448520 HES2Q9Y543 173 aa15.16■□□□□ 0.02
PDLIM2-213ENST00000448520 MORC2Q9Y6X9 1032 aaPredicted RBP15.16■□□□□ 0.02
PDLIM2-213ENST00000448520 ZMYM2Q9UBW7 1377 aa15.15■□□□□ 0.02
PDLIM2-213ENST00000448520 GFRA3O60609 400 aa15.15■□□□□ 0.02
PDLIM2-213ENST00000448520 SCNN1GP51170 649 aa15.15■□□□□ 0.02
PDLIM2-213ENST00000448520 USP41Q3LFD5 358 aa15.15■□□□□ 0.02
PDLIM2-213ENST00000448520 SLC27A1Q6PCB7 646 aa15.15■□□□□ 0.02
PDLIM2-213ENST00000448520 TMEM105Q8N8V8 129 aa15.15■□□□□ 0.02
PDLIM2-213ENST00000448520 IGSF22Q8N9C0 903 aa15.15■□□□□ 0.02
PDLIM2-213ENST00000448520 ASAP3Q8TDY4 903 aa15.15■□□□□ 0.02
PDLIM2-213ENST00000448520 PRIMPOLQ96LW4 560 aa15.15■□□□□ 0.02
PDLIM2-213ENST00000448520 MMTAG2Q9BU76 263 aaKnown RBP15.15■□□□□ 0.02
PDLIM2-213ENST00000448520 FNIP2Q9P278 1114 aa15.15■□□□□ 0.02
PDLIM2-213ENST00000448520 DUSP12Q9UNI6 340 aa15.15■□□□□ 0.02
PDLIM2-213ENST00000448520 FAM186AA6NE01 2351 aa15.15■□□□□ 0.02
PDLIM2-213ENST00000448520 ZFHX2Q9C0A1 2572 aaPredicted RBP15.15■□□□□ 0.02
PDLIM2-213ENST00000448520 ARID2Q68CP9 1835 aa15.15■□□□□ 0.02
PDLIM2-213ENST00000448520 C2orf16Q68DN1 1984 aa15.15■□□□□ 0.02
PDLIM2-213ENST00000448520 A0A087WWV3 80 aa15.14■□□□□ 0.01
PDLIM2-213ENST00000448520 PAPLNO95428 1278 aa15.14■□□□□ 0.01
PDLIM2-213ENST00000448520 CREMQ03060 361 aa15.14■□□□□ 0.01
PDLIM2-213ENST00000448520 GRIK3Q13003 919 aa15.14■□□□□ 0.01
PDLIM2-213ENST00000448520 GSTCDQ8NEC7 633 aa15.14■□□□□ 0.01
PDLIM2-213ENST00000448520 MCPH1Q8NEM0 835 aa15.14■□□□□ 0.01
PDLIM2-213ENST00000448520 PIGOQ8TEQ8 1089 aa15.14■□□□□ 0.01
PDLIM2-213ENST00000448520 ZFP42Q96MM3 310 aa15.14■□□□□ 0.01
PDLIM2-213ENST00000448520 NACC1Q96RE7 527 aa15.14■□□□□ 0.01
PDLIM2-213ENST00000448520 PLIN2Q99541 437 aa15.14■□□□□ 0.01
PDLIM2-213ENST00000448520 RTP3Q9BQQ7 232 aa15.14■□□□□ 0.01
PDLIM2-213ENST00000448520 APOL6Q9BWW8 343 aa15.14■□□□□ 0.01
PDLIM2-213ENST00000448520 POLR3FQ9H1D9 316 aaPredicted RBP15.14■□□□□ 0.01
PDLIM2-213ENST00000448520 SMOC2Q9H3U7 446 aa15.14■□□□□ 0.01
PDLIM2-213ENST00000448520 GOLPH3LQ9H4A5 285 aa15.14■□□□□ 0.01
PDLIM2-213ENST00000448520 TUFT1Q9NNX1 390 aa15.14■□□□□ 0.01
PDLIM2-213ENST00000448520 FAM86C1Q9NVL1 165 aa15.14■□□□□ 0.01
PDLIM2-213ENST00000448520 PRMT7Q9NVM4 692 aaPredicted RBP15.14■□□□□ 0.01
PDLIM2-213ENST00000448520 LRWD1Q9UFC0 647 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms