RNA–Protein interactions for RNA: ENST00000448310.1

CBX4-202, Transcript of chromobox 4, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CBX4, Length 718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-202ENST00000448310 MAPK6Q16659 721 aa31.24■■■□□ 2.59
CBX4-202ENST00000448310 NOSTRINQ8IVI9 506 aa31.24■■■□□ 2.59
CBX4-202ENST00000448310 TMEM105Q8N8V8 129 aa31.24■■■□□ 2.59
CBX4-202ENST00000448310 DEPTORQ8TB45 409 aa31.24■■■□□ 2.59
CBX4-202ENST00000448310 KIFC3Q9BVG8 833 aa31.24■■■□□ 2.59
CBX4-202ENST00000448310 CCDC113Q9H0I3 377 aa31.24■■■□□ 2.59
CBX4-202ENST00000448310 PTGESO14684 152 aa31.23■■■□□ 2.59
CBX4-202ENST00000448310 TGM5O43548 720 aa31.23■■■□□ 2.59
CBX4-202ENST00000448310 RECQL4O94761 1208 aa31.23■■■□□ 2.59
CBX4-202ENST00000448310 CCT6AP40227 531 aaKnown RBP31.23■■■□□ 2.59
CBX4-202ENST00000448310 NAMPTP43490 491 aa31.23■■■□□ 2.59
CBX4-202ENST00000448310 RBM25P49756 843 aaKnown RBP31.23■■■□□ 2.59
CBX4-202ENST00000448310 TUSC3Q13454 348 aa31.23■■■□□ 2.59
CBX4-202ENST00000448310 EEF1DP3Q658K8 133 aa31.23■■■□□ 2.59
CBX4-202ENST00000448310 ELMSAN1Q6PJG2 1045 aa31.23■■■□□ 2.59
CBX4-202ENST00000448310 PRSS55Q6UWB4 352 aaPredicted RBP31.23■■■□□ 2.59
CBX4-202ENST00000448310 FAM184AQ8NB25 1140 aa31.23■■■□□ 2.59
CBX4-202ENST00000448310 SMG7Q92540 1137 aaKnown RBP31.23■■■□□ 2.59
CBX4-202ENST00000448310 KCNK12Q9HB15 430 aa31.23■■■□□ 2.59
CBX4-202ENST00000448310 WDR6Q9NNW5 1121 aaKnown RBP31.23■■■□□ 2.59
CBX4-202ENST00000448310 DPP7Q9UHL4 492 aa31.23■■■□□ 2.59
CBX4-202ENST00000448310 DOCK6Q96HP0 2047 aa31.22■■■□□ 2.59
CBX4-202ENST00000448310 H0Y858 1186 aa31.22■■■□□ 2.59
CBX4-202ENST00000448310 HMGN5P82970 282 aaKnown RBP31.22■■■□□ 2.59
CBX4-202ENST00000448310 RTP2Q5QGT7 225 aa31.22■■■□□ 2.59
CBX4-202ENST00000448310 HAUS3Q68CZ6 603 aa31.22■■■□□ 2.59
CBX4-202ENST00000448310 C4orf32Q8N8J7 132 aa31.22■■■□□ 2.59
CBX4-202ENST00000448310 ZNF707Q96C28 371 aaPredicted RBP31.22■■■□□ 2.59
CBX4-202ENST00000448310 ZSCAN31Q96LW9 406 aaPredicted RBP31.22■■■□□ 2.59
CBX4-202ENST00000448310 MFSD1Q9H3U5 465 aa31.22■■■□□ 2.59
CBX4-202ENST00000448310 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP31.22■■■□□ 2.59
CBX4-202ENST00000448310 VWA8A3KMH1 1905 aa31.22■■■□□ 2.59
CBX4-202ENST00000448310 CLUHO75153 1309 aa31.22■■■□□ 2.59
CBX4-202ENST00000448310 ACKR2O00590 384 aa31.21■■■□□ 2.59
CBX4-202ENST00000448310 KIF4AO95239 1232 aa31.21■■■□□ 2.59
CBX4-202ENST00000448310 GBP2P32456 591 aaPredicted RBP31.21■■■□□ 2.59
CBX4-202ENST00000448310 TDGQ13569 410 aa31.21■■■□□ 2.59
CBX4-202ENST00000448310 ATOH1Q92858 354 aaPredicted RBP31.21■■■□□ 2.59
CBX4-202ENST00000448310 KIF2CQ99661 725 aa31.21■■■□□ 2.59
CBX4-202ENST00000448310 BHMT2Q9H2M3 363 aa31.21■■■□□ 2.59
CBX4-202ENST00000448310 FNIP2Q9P278 1114 aa31.21■■■□□ 2.59
CBX4-202ENST00000448310 NOL7Q9UMY1 257 aaKnown RBP31.21■■■□□ 2.59
CBX4-202ENST00000448310 SF3B1O75533 1304 aaKnown RBP eCLIP31.21■■■□□ 2.591e-6■■■■■ 30
CBX4-202ENST00000448310 FXR2P51116 673 aaKnown RBP eCLIP31.2■■■□□ 2.593e-6■□□□□ 10.5
CBX4-202ENST00000448310 ADPGKQ9BRR6 497 aa31.2■■■□□ 2.59
CBX4-202ENST00000448310 LRWD1Q9UFC0 647 aa31.2■■■□□ 2.59
CBX4-202ENST00000448310 KIAA1024Q9UPX6 916 aa31.2■■■□□ 2.59
CBX4-202ENST00000448310 GDAQ9Y2T3 454 aa31.2■■■□□ 2.59
CBX4-202ENST00000448310 GALR2O43603 387 aaPredicted RBP31.19■■■□□ 2.58
CBX4-202ENST00000448310 THP07101 528 aa31.19■■■□□ 2.58
CBX4-202ENST00000448310 TRAPPC10P48553 1259 aa31.19■■■□□ 2.58
CBX4-202ENST00000448310 PPP2R5AQ15172 486 aa31.19■■■□□ 2.58
CBX4-202ENST00000448310 ASTLQ6HA08 431 aaPredicted RBP31.19■■■□□ 2.58
CBX4-202ENST00000448310 LILRA6Q6PI73 481 aa31.19■■■□□ 2.58
CBX4-202ENST00000448310 CYP26C1Q6V0L0 522 aa31.19■■■□□ 2.58
CBX4-202ENST00000448310 HDAC7Q8WUI4 952 aa31.19■■■□□ 2.58
CBX4-202ENST00000448310 RSAD2Q8WXG1 361 aa31.19■■■□□ 2.58
CBX4-202ENST00000448310 MYADMQ96S97 322 aa31.19■■■□□ 2.58
CBX4-202ENST00000448310 RHOBTB2Q9BYZ6 727 aa31.19■■■□□ 2.58
CBX4-202ENST00000448310 NT5C3AQ9H0P0 336 aa31.19■■■□□ 2.58
CBX4-202ENST00000448310 PLEKHA4Q9H4M7 779 aa31.19■■■□□ 2.58
CBX4-202ENST00000448310 PIDD1Q9HB75 910 aa31.19■■■□□ 2.58
CBX4-202ENST00000448310 SH2B1Q9NRF2 756 aaPredicted RBP31.19■■■□□ 2.58
CBX4-202ENST00000448310 USP34Q70CQ2 3546 aa31.18■■■□□ 2.58
CBX4-202ENST00000448310 MUTP22033 750 aa31.18■■■□□ 2.58
CBX4-202ENST00000448310 NAB2Q15742 525 aa31.18■■■□□ 2.58
CBX4-202ENST00000448310 FAM171A1Q5VUB5 890 aa31.18■■■□□ 2.58
CBX4-202ENST00000448310 CEP57Q86XR8 500 aa31.18■■■□□ 2.58
CBX4-202ENST00000448310 GPR65Q8IYL9 337 aa31.18■■■□□ 2.58
CBX4-202ENST00000448310 FLCNQ8NFG4 579 aa31.18■■■□□ 2.58
CBX4-202ENST00000448310 STAMQ92783 540 aa31.18■■■□□ 2.58
CBX4-202ENST00000448310 IFT74Q96LB3 600 aa31.18■■■□□ 2.58
CBX4-202ENST00000448310 DDX19AQ9NUU7 478 aaKnown RBP31.18■■■□□ 2.58
CBX4-202ENST00000448310 DUSP12Q9UNI6 340 aa31.18■■■□□ 2.58
CBX4-202ENST00000448310 NARSO43776 548 aaKnown RBP31.17■■■□□ 2.58
CBX4-202ENST00000448310 TOB1P50616 345 aaPredicted RBP31.17■■■□□ 2.58
CBX4-202ENST00000448310 NUBP1P53384 320 aa31.17■■■□□ 2.58
CBX4-202ENST00000448310 NT5DC1Q5TFE4 455 aa31.17■■■□□ 2.58
CBX4-202ENST00000448310 CWF19L1Q69YN2 538 aaKnown RBP31.17■■■□□ 2.58
CBX4-202ENST00000448310 SNX29Q8TEQ0 813 aa31.17■■■□□ 2.58
CBX4-202ENST00000448310 PCDHB6Q9Y5E3 794 aa31.17■■■□□ 2.58
CBX4-202ENST00000448310 CREMQ03060 361 aa31.16■■■□□ 2.58
CBX4-202ENST00000448310 PTGDRQ13258 359 aa31.16■■■□□ 2.58
CBX4-202ENST00000448310 TTPALQ9BTX7 342 aa31.16■■■□□ 2.58
CBX4-202ENST00000448310 ZDHHC7Q9NXF8 308 aa31.16■■■□□ 2.58
CBX4-202ENST00000448310 IGSF9Q9P2J2 1179 aa31.16■■■□□ 2.58
CBX4-202ENST00000448310 FBXL21Q9UKT6 434 aa31.16■■■□□ 2.58
CBX4-202ENST00000448310 GLRA4Q5JXX5 417 aa31.15■■■□□ 2.58
CBX4-202ENST00000448310 ATF7IP2Q5U623 682 aa31.15■■■□□ 2.58
CBX4-202ENST00000448310 KIFAP3Q92845 792 aa31.15■■■□□ 2.58
CBX4-202ENST00000448310 CLSTN3Q9BQT9 956 aa31.15■■■□□ 2.58
CBX4-202ENST00000448310 PRKD2Q9BZL6 878 aa31.15■■■□□ 2.58
CBX4-202ENST00000448310 IRF2BPLQ9H1B7 796 aa31.15■■■□□ 2.58
CBX4-202ENST00000448310 ZFHX2Q9C0A1 2572 aaPredicted RBP31.14■■■□□ 2.58
CBX4-202ENST00000448310 PP2D1A8MPX8 630 aa31.14■■■□□ 2.58
CBX4-202ENST00000448310 PAPLNO95428 1278 aa31.14■■■□□ 2.58
CBX4-202ENST00000448310 C1RP00736 705 aa31.14■■■□□ 2.58
CBX4-202ENST00000448310 NPR3P17342 541 aa31.14■■■□□ 2.58
CBX4-202ENST00000448310 IGFBP6P24592 240 aaPredicted RBP31.14■■■□□ 2.58
CBX4-202ENST00000448310 U2AF2P26368 475 aaKnown RBP eCLIP31.14■■■□□ 2.587e-10■■□□□ 13.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms