RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 H0YGN5 161 aa19.6■□□□□ 0.73
TRAPPC4-203ENST00000447216 TULP1O00294 542 aaPredicted RBP19.6■□□□□ 0.73
TRAPPC4-203ENST00000447216 EXTL3O43909 919 aa19.6■□□□□ 0.73
TRAPPC4-203ENST00000447216 ACTN1P12814 892 aa19.6■□□□□ 0.73
TRAPPC4-203ENST00000447216 AKAP5P24588 427 aa19.6■□□□□ 0.73
TRAPPC4-203ENST00000447216 RPL13P26373 211 aaKnown RBP19.6■□□□□ 0.73
TRAPPC4-203ENST00000447216 GRM5P41594 1212 aa19.6■□□□□ 0.73
TRAPPC4-203ENST00000447216 RAB27AP51159 221 aa19.6■□□□□ 0.73
TRAPPC4-203ENST00000447216 IQCB1Q15051 598 aa19.6■□□□□ 0.73
TRAPPC4-203ENST00000447216 HSP90AA4PQ58FG1 418 aa19.6■□□□□ 0.73
TRAPPC4-203ENST00000447216 SPATA1Q5VX52 437 aa19.6■□□□□ 0.73
TRAPPC4-203ENST00000447216 FOXR2Q6PJQ5 311 aa19.6■□□□□ 0.73
TRAPPC4-203ENST00000447216 DHX40Q8IX18 779 aaKnown RBP19.6■□□□□ 0.73
TRAPPC4-203ENST00000447216 BPIFA3Q9BQP9 254 aa19.6■□□□□ 0.73
TRAPPC4-203ENST00000447216 TRAIPQ9BWF2 469 aa19.6■□□□□ 0.73
TRAPPC4-203ENST00000447216 NFE2L3Q9Y4A8 694 aa19.6■□□□□ 0.73
TRAPPC4-203ENST00000447216 ABHD14A-ACY1A0A1B0GW23 586 aa19.59■□□□□ 0.73
TRAPPC4-203ENST00000447216 ZBBXA8MT70 800 aa19.59■□□□□ 0.73
TRAPPC4-203ENST00000447216 AKAP3O75969 853 aa19.59■□□□□ 0.73
TRAPPC4-203ENST00000447216 ITGA4P13612 1032 aa19.59■□□□□ 0.73
TRAPPC4-203ENST00000447216 WDR5P61964 334 aaKnown RBP19.59■□□□□ 0.73
TRAPPC4-203ENST00000447216 FAM189BP81408 668 aa19.59■□□□□ 0.73
TRAPPC4-203ENST00000447216 MYL5Q02045 173 aa19.59■□□□□ 0.73
TRAPPC4-203ENST00000447216 MYBPC2Q14324 1141 aa19.59■□□□□ 0.73
TRAPPC4-203ENST00000447216 NCAPHQ15003 741 aa19.59■□□□□ 0.73
TRAPPC4-203ENST00000447216 PSRC1Q6PGN9 363 aaPredicted RBP19.59■□□□□ 0.73
TRAPPC4-203ENST00000447216 MRPL10Q7Z7H8 261 aaKnown RBP19.59■□□□□ 0.73
TRAPPC4-203ENST00000447216 ZNF598Q86UK7 904 aaKnown RBP19.59■□□□□ 0.73
TRAPPC4-203ENST00000447216 GAS2L3Q86XJ1 694 aa19.59■□□□□ 0.73
TRAPPC4-203ENST00000447216 FBXL18Q96ME1 805 aa19.59■□□□□ 0.73
TRAPPC4-203ENST00000447216 CCDC94Q9BW85 323 aaPredicted RBP19.59■□□□□ 0.73
TRAPPC4-203ENST00000447216 CXCL16Q9H2A7 254 aa19.59■□□□□ 0.73
TRAPPC4-203ENST00000447216 SAMSN1Q9NSI8 373 aaKnown RBP19.59■□□□□ 0.73
TRAPPC4-203ENST00000447216 RNF19AQ9NV58 838 aa19.59■□□□□ 0.73
TRAPPC4-203ENST00000447216 KLK14Q9P0G3 267 aa19.59■□□□□ 0.73
TRAPPC4-203ENST00000447216 PARP2Q9UGN5 583 aa19.59■□□□□ 0.73
TRAPPC4-203ENST00000447216 CPSF3Q9UKF6 684 aaKnown RBP19.59■□□□□ 0.73
TRAPPC4-203ENST00000447216 KIAA0391O15091 583 aaKnown RBP19.58■□□□□ 0.72
TRAPPC4-203ENST00000447216 MEFVO15553 781 aaPredicted RBP19.58■□□□□ 0.72
TRAPPC4-203ENST00000447216 ZNF623O75123 536 aa19.58■□□□□ 0.72
TRAPPC4-203ENST00000447216 RECQL4O94761 1208 aa19.58■□□□□ 0.72
TRAPPC4-203ENST00000447216 LDHAP00338 332 aaKnown RBP19.58■□□□□ 0.72
TRAPPC4-203ENST00000447216 CLTAP09496 248 aa19.58■□□□□ 0.72
TRAPPC4-203ENST00000447216 CXCL8P10145 99 aa19.58■□□□□ 0.72
TRAPPC4-203ENST00000447216 SKIP12755 728 aa19.58■□□□□ 0.72
TRAPPC4-203ENST00000447216 WNT7BP56706 349 aa19.58■□□□□ 0.72
TRAPPC4-203ENST00000447216 DEFB103AP81534 67 aa19.58■□□□□ 0.72
TRAPPC4-203ENST00000447216 ENOX2Q16206 610 aaKnown RBP19.58■□□□□ 0.72
TRAPPC4-203ENST00000447216 SNRNP35Q16560 246 aaKnown RBP19.58■□□□□ 0.72
TRAPPC4-203ENST00000447216 AGMOQ6ZNB7 445 aa19.58■□□□□ 0.72
TRAPPC4-203ENST00000447216 LUZP1Q86V48 1076 aa19.58■□□□□ 0.72
TRAPPC4-203ENST00000447216 FAM186BQ8IYM0 893 aa19.58■□□□□ 0.72
TRAPPC4-203ENST00000447216 RNF214Q8ND24 703 aa19.58■□□□□ 0.72
TRAPPC4-203ENST00000447216 TMEM174Q8WUU8 243 aa19.58■□□□□ 0.72
TRAPPC4-203ENST00000447216 FAM212AQ96EL1 285 aa19.58■□□□□ 0.72
TRAPPC4-203ENST00000447216 CEP63Q96MT8 703 aa19.58■□□□□ 0.72
TRAPPC4-203ENST00000447216 ACAP3Q96P50 834 aa19.58■□□□□ 0.72
TRAPPC4-203ENST00000447216 ANP32EQ9BTT0 268 aa19.58■□□□□ 0.72
TRAPPC4-203ENST00000447216 RPF1Q9H9Y2 349 aaKnown RBP19.58■□□□□ 0.72
TRAPPC4-203ENST00000447216 FANCLQ9NW38 375 aa19.58■□□□□ 0.72
TRAPPC4-203ENST00000447216 FRMD4BQ9Y2L6 1034 aa19.58■□□□□ 0.72
TRAPPC4-203ENST00000447216 GBF1Q92538 1859 aa19.57■□□□□ 0.72
TRAPPC4-203ENST00000447216 ZNF233A6NK53 670 aa19.57■□□□□ 0.72
TRAPPC4-203ENST00000447216 BAIAP3O94812 1187 aa19.57■□□□□ 0.72
TRAPPC4-203ENST00000447216 UPP2O95045 317 aa19.57■□□□□ 0.72
TRAPPC4-203ENST00000447216 TMCO2Q7Z6W1 182 aaPredicted RBP19.57■□□□□ 0.72
TRAPPC4-203ENST00000447216 IRF2BP1Q8IU81 584 aa19.57■□□□□ 0.72
TRAPPC4-203ENST00000447216 BRSK2Q8IWQ3 736 aa19.57■□□□□ 0.72
TRAPPC4-203ENST00000447216 FAM200AQ8TCP9 573 aa19.57■□□□□ 0.72
TRAPPC4-203ENST00000447216 KIAA1586Q9HCI6 787 aa19.57■□□□□ 0.72
TRAPPC4-203ENST00000447216 RBAKQ9NYW8 714 aaPredicted RBP19.57■□□□□ 0.72
TRAPPC4-203ENST00000447216 CXXC1Q9P0U4 656 aaPredicted RBP19.57■□□□□ 0.72
TRAPPC4-203ENST00000447216 LRFN2Q9ULH4 789 aa19.57■□□□□ 0.72
TRAPPC4-203ENST00000447216 SMTNL1A8MU46 457 aa19.56■□□□□ 0.72
TRAPPC4-203ENST00000447216 BECN2A8MW95 431 aa19.56■□□□□ 0.72
TRAPPC4-203ENST00000447216 IKBKBO14920 756 aa19.56■□□□□ 0.72
TRAPPC4-203ENST00000447216 CAVIN2O95810 425 aa19.56■□□□□ 0.72
TRAPPC4-203ENST00000447216 EPB41P11171 864 aaKnown RBP19.56■□□□□ 0.72
TRAPPC4-203ENST00000447216 FGFR1P11362 822 aa19.56■□□□□ 0.72
TRAPPC4-203ENST00000447216 PSMC2P35998 433 aaKnown RBP19.56■□□□□ 0.72
TRAPPC4-203ENST00000447216 KCNJ6P48051 423 aa19.56■□□□□ 0.72
TRAPPC4-203ENST00000447216 GATMP50440 423 aa19.56■□□□□ 0.72
TRAPPC4-203ENST00000447216 CYP24A1Q07973 514 aa19.56■□□□□ 0.72
TRAPPC4-203ENST00000447216 KYAT1Q16773 422 aa19.56■□□□□ 0.72
TRAPPC4-203ENST00000447216 SLC10A6Q3KNW5 377 aa19.56■□□□□ 0.72
TRAPPC4-203ENST00000447216 CCDC40Q4G0X9 1142 aa19.56■□□□□ 0.72
TRAPPC4-203ENST00000447216 C9orf50Q5SZB4 431 aa19.56■□□□□ 0.72
TRAPPC4-203ENST00000447216 FAM43BQ6ZT52 329 aaPredicted RBP19.56■□□□□ 0.72
TRAPPC4-203ENST00000447216 FILIP1Q7Z7B0 1213 aa19.56■□□□□ 0.72
TRAPPC4-203ENST00000447216 CREBRFQ8IUR6 639 aa19.56■□□□□ 0.72
TRAPPC4-203ENST00000447216 HACE1Q8IYU2 909 aa19.56■□□□□ 0.72
TRAPPC4-203ENST00000447216 PLEKHO2Q8TD55 490 aa19.56■□□□□ 0.72
TRAPPC4-203ENST00000447216 HERVK_113Q902F9 699 aa19.56■□□□□ 0.72
TRAPPC4-203ENST00000447216 PGBD4Q96DM1 585 aa19.56■□□□□ 0.72
TRAPPC4-203ENST00000447216 THAP9Q9H5L6 903 aa19.56■□□□□ 0.72
TRAPPC4-203ENST00000447216 TMEM161AQ9NX61 479 aa19.56■□□□□ 0.72
TRAPPC4-203ENST00000447216 PCDHB7Q9Y5E2 793 aa19.56■□□□□ 0.72
TRAPPC4-203ENST00000447216 LACTBL1A8MY62 500 aa19.55■□□□□ 0.72
TRAPPC4-203ENST00000447216 SLC16A3O15427 465 aaKnown RBP19.55■□□□□ 0.72
TRAPPC4-203ENST00000447216 EFCAB14O75071 495 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms