RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 FBXO41Q8TF61 875 aa5.52□□□□□ -1.53
HMGB1P16-201ENST00000447155 CASKIN2Q8WXE0 1202 aa5.52□□□□□ -1.53
HMGB1P16-201ENST00000447155 CFHR4Q92496 578 aa5.52□□□□□ -1.53
HMGB1P16-201ENST00000447155 CDK5RAP3Q96JB5 506 aa5.52□□□□□ -1.53
HMGB1P16-201ENST00000447155 CLPTM1LQ96KA5 538 aa5.52□□□□□ -1.53
HMGB1P16-201ENST00000447155 MRGPRX4Q96LA9 322 aa5.52□□□□□ -1.53
HMGB1P16-201ENST00000447155 TOX2Q96NM4 488 aa5.52□□□□□ -1.53
HMGB1P16-201ENST00000447155 DMRTA2Q96SC8 542 aa5.52□□□□□ -1.53
HMGB1P16-201ENST00000447155 GPHA2Q96T91 129 aa5.52□□□□□ -1.53
HMGB1P16-201ENST00000447155 SENP6Q9GZR1 1112 aaPredicted RBP5.52□□□□□ -1.53
HMGB1P16-201ENST00000447155 DDX21Q9NR30 783 aaKnown RBP eCLIP5.52□□□□□ -1.53
HMGB1P16-201ENST00000447155 TMEM140Q9NV12 185 aa5.52□□□□□ -1.53
HMGB1P16-201ENST00000447155 PUF60Q9UHX1 559 aaKnown RBP5.52□□□□□ -1.53
HMGB1P16-201ENST00000447155 STXBP5LQ9Y2K9 1186 aa5.52□□□□□ -1.53
HMGB1P16-201ENST00000447155 PEG3Q9GZU2 1588 aa5.51□□□□□ -1.53
HMGB1P16-201ENST00000447155 TPP1O14773 563 aa5.51□□□□□ -1.53
HMGB1P16-201ENST00000447155 GPR32O75388 356 aa5.51□□□□□ -1.53
HMGB1P16-201ENST00000447155 C8AP07357 584 aa5.51□□□□□ -1.53
HMGB1P16-201ENST00000447155 PHKG2P15735 406 aa5.51□□□□□ -1.53
HMGB1P16-201ENST00000447155 RHCEP18577 417 aa5.51□□□□□ -1.53
HMGB1P16-201ENST00000447155 PTPN7P35236 360 aa5.51□□□□□ -1.53
HMGB1P16-201ENST00000447155 CASRP41180 1078 aa5.51□□□□□ -1.53
HMGB1P16-201ENST00000447155 TXKP42681 527 aa5.51□□□□□ -1.53
HMGB1P16-201ENST00000447155 RHDQ02161 417 aa5.51□□□□□ -1.53
HMGB1P16-201ENST00000447155 NOGQ13253 232 aa5.51□□□□□ -1.53
HMGB1P16-201ENST00000447155 HDAC1Q13547 482 aaPredicted RBP5.51□□□□□ -1.53
HMGB1P16-201ENST00000447155 ACAP1Q15027 740 aa5.51□□□□□ -1.53
HMGB1P16-201ENST00000447155 ANO6Q4KMQ2 910 aa5.51□□□□□ -1.53
HMGB1P16-201ENST00000447155 GADL1Q6ZQY3 521 aa5.51□□□□□ -1.53
HMGB1P16-201ENST00000447155 ZNF572Q7Z3I7 529 aaPredicted RBP5.51□□□□□ -1.53
HMGB1P16-201ENST00000447155 DAAM2Q86T65 1068 aa5.51□□□□□ -1.53
HMGB1P16-201ENST00000447155 KIAA0319LQ8IZA0 1049 aa5.51□□□□□ -1.53
HMGB1P16-201ENST00000447155 PJA1Q8NG27 643 aa5.51□□□□□ -1.53
HMGB1P16-201ENST00000447155 OR5M3Q8NGP4 307 aa5.51□□□□□ -1.53
HMGB1P16-201ENST00000447155 KLHDC4Q8TBB5 520 aa5.51□□□□□ -1.53
HMGB1P16-201ENST00000447155 RAB24Q969Q5 203 aa5.51□□□□□ -1.53
HMGB1P16-201ENST00000447155 TMX3Q96JJ7 454 aa5.51□□□□□ -1.53
HMGB1P16-201ENST00000447155 FAM167AQ96KS9 214 aa5.51□□□□□ -1.53
HMGB1P16-201ENST00000447155 SAMD11Q96NU1 681 aa5.51□□□□□ -1.53
HMGB1P16-201ENST00000447155 LRFN3Q9BTN0 628 aa5.51□□□□□ -1.53
HMGB1P16-201ENST00000447155 B3GNT5Q9BYG0 378 aa5.51□□□□□ -1.53
HMGB1P16-201ENST00000447155 ENKD1Q9H0I2 346 aa5.51□□□□□ -1.53
HMGB1P16-201ENST00000447155 LDAHQ9H6V9 325 aa5.51□□□□□ -1.53
HMGB1P16-201ENST00000447155 IL23AQ9NPF7 189 aa5.51□□□□□ -1.53
HMGB1P16-201ENST00000447155 NCDNQ9UBB6 729 aa5.51□□□□□ -1.53
HMGB1P16-201ENST00000447155 NR2E3Q9Y5X4 410 aa5.51□□□□□ -1.53
HMGB1P16-201ENST00000447155 MYBBP1AQ9BQG0 1328 aaKnown RBP5.5□□□□□ -1.53
HMGB1P16-201ENST00000447155 CCER2I3L3R5 266 aa5.5□□□□□ -1.53
HMGB1P16-201ENST00000447155 TEX33O43247 280 aa5.5□□□□□ -1.53
HMGB1P16-201ENST00000447155 CNOT4O95628 575 aaKnown RBP5.5□□□□□ -1.53
HMGB1P16-201ENST00000447155 AMY1AP04745 511 aa5.5□□□□□ -1.53
HMGB1P16-201ENST00000447155 IL2RBP14784 551 aa5.5□□□□□ -1.53
HMGB1P16-201ENST00000447155 SYN1P17600 705 aa5.5□□□□□ -1.53
HMGB1P16-201ENST00000447155 DDCP20711 480 aa5.5□□□□□ -1.53
HMGB1P16-201ENST00000447155 GZMKP49863 264 aa5.5□□□□□ -1.53
HMGB1P16-201ENST00000447155 AGFG1P52594 562 aaKnown RBP5.5□□□□□ -1.53
HMGB1P16-201ENST00000447155 NPEPPSP55786 919 aa5.5□□□□□ -1.53
HMGB1P16-201ENST00000447155 TLE1Q04724 770 aa5.5□□□□□ -1.53
HMGB1P16-201ENST00000447155 SP140Q13342 867 aa5.5□□□□□ -1.53
HMGB1P16-201ENST00000447155 RIN1Q13671 783 aa5.5□□□□□ -1.53
HMGB1P16-201ENST00000447155 UBE4AQ14139 1066 aa5.5□□□□□ -1.53
HMGB1P16-201ENST00000447155 LLGL1Q15334 1064 aa5.5□□□□□ -1.53
HMGB1P16-201ENST00000447155 SAFBQ15424 915 aaKnown RBP eCLIP5.5□□□□□ -1.53
HMGB1P16-201ENST00000447155 COBLL1Q53SF7 1204 aa5.5□□□□□ -1.53
HMGB1P16-201ENST00000447155 CCDC157Q569K6 752 aa5.5□□□□□ -1.53
HMGB1P16-201ENST00000447155 PRAMEF14Q5SWL7 426 aa5.5□□□□□ -1.53
HMGB1P16-201ENST00000447155 NT5DC1Q5TFE4 455 aa5.5□□□□□ -1.53
HMGB1P16-201ENST00000447155 NPNTQ6UXI9 565 aa5.5□□□□□ -1.53
HMGB1P16-201ENST00000447155 ADGRE4PQ86SQ3 457 aa5.5□□□□□ -1.53
HMGB1P16-201ENST00000447155 LRRC56Q8IYG6 542 aaPredicted RBP5.5□□□□□ -1.53
HMGB1P16-201ENST00000447155 ZGPATQ8N5A5 531 aaKnown RBP5.5□□□□□ -1.53
HMGB1P16-201ENST00000447155 SHCBP1Q8NEM2 672 aa5.5□□□□□ -1.53
HMGB1P16-201ENST00000447155 REPS2Q8NFH8 660 aa5.5□□□□□ -1.53
HMGB1P16-201ENST00000447155 MDM1Q8TC05 714 aa5.5□□□□□ -1.53
HMGB1P16-201ENST00000447155 IFI44Q8TCB0 444 aa5.5□□□□□ -1.53
HMGB1P16-201ENST00000447155 IL17RAQ96F46 866 aa5.5□□□□□ -1.53
HMGB1P16-201ENST00000447155 NEIL1Q96FI4 390 aaPredicted RBP5.5□□□□□ -1.53
HMGB1P16-201ENST00000447155 PTPN18Q99952 460 aa5.5□□□□□ -1.53
HMGB1P16-201ENST00000447155 KRTAP4-8Q9BYQ9 185 aa5.5□□□□□ -1.53
HMGB1P16-201ENST00000447155 ZNF700Q9H0M5 742 aa5.5□□□□□ -1.53
HMGB1P16-201ENST00000447155 SEC61A2Q9H9S3 476 aa5.5□□□□□ -1.53
HMGB1P16-201ENST00000447155 AJAP1Q9UKB5 411 aaPredicted RBP5.5□□□□□ -1.53
HMGB1P16-201ENST00000447155 TOP2AP11388 1531 aaKnown RBP5.49□□□□□ -1.53
HMGB1P16-201ENST00000447155 POLR1AO95602 1720 aaPredicted RBP5.49□□□□□ -1.53
HMGB1P16-201ENST00000447155 A0A088AWK7 358 aa5.49□□□□□ -1.53
HMGB1P16-201ENST00000447155 ANO9A1A5B4 782 aa5.49□□□□□ -1.53
HMGB1P16-201ENST00000447155 CAPN8A6NHC0 703 aa5.49□□□□□ -1.53
HMGB1P16-201ENST00000447155 LRRC14BA6NHZ5 514 aa5.49□□□□□ -1.53
HMGB1P16-201ENST00000447155 MATN2O00339 956 aa5.49□□□□□ -1.53
HMGB1P16-201ENST00000447155 SASH1O94885 1247 aa5.49□□□□□ -1.53
HMGB1P16-201ENST00000447155 NBPF7P0C2Y1 421 aaPredicted RBP5.49□□□□□ -1.53
HMGB1P16-201ENST00000447155 FLT3LGP49771 235 aa5.49□□□□□ -1.53
HMGB1P16-201ENST00000447155 CACNB3P54284 484 aa5.49□□□□□ -1.53
HMGB1P16-201ENST00000447155 CTXN1P60606 82 aa5.49□□□□□ -1.53
HMGB1P16-201ENST00000447155 PPP2CBP62714 309 aa5.49□□□□□ -1.53
HMGB1P16-201ENST00000447155 PPP2CAP67775 309 aa5.49□□□□□ -1.53
HMGB1P16-201ENST00000447155 FAM193AP78312 1265 aa5.49□□□□□ -1.53
HMGB1P16-201ENST00000447155 GPSM2P81274 684 aa5.49□□□□□ -1.53
HMGB1P16-201ENST00000447155 ATP8B2P98198 1209 aa5.49□□□□□ -1.53
HMGB1P16-201ENST00000447155 APBA1Q02410 837 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms