RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 SLC47A2Q86VL8 602 aa18.83■□□□□ 0.61
SMC6-206ENST00000446852 RPUSD2Q8IZ73 545 aaKnown RBP18.83■□□□□ 0.61
SMC6-206ENST00000446852 RFFLQ8WZ73 363 aa18.83■□□□□ 0.61
SMC6-206ENST00000446852 DHX38Q92620 1227 aaKnown RBP18.83■□□□□ 0.61
SMC6-206ENST00000446852 MSTO1Q9BUK6 570 aa18.83■□□□□ 0.61
SMC6-206ENST00000446852 THAP2Q9H0W7 228 aa18.83■□□□□ 0.61
SMC6-206ENST00000446852 IGKV6-21A0A0C4DH24 114 aa18.83■□□□□ 0.6
SMC6-206ENST00000446852 TARSL2A2RTX5 802 aaKnown RBP18.83■□□□□ 0.6
SMC6-206ENST00000446852 KIAA0391O15091 583 aaKnown RBP18.83■□□□□ 0.6
SMC6-206ENST00000446852 KIF4AO95239 1232 aa18.83■□□□□ 0.6
SMC6-206ENST00000446852 LAMTOR4Q0VGL1 99 aa18.83■□□□□ 0.6
SMC6-206ENST00000446852 IER5Q5VY09 327 aa18.83■□□□□ 0.6
SMC6-206ENST00000446852 SLFN12LQ6IEE8 588 aa18.83■□□□□ 0.6
SMC6-206ENST00000446852 KRT222Q8N1A0 295 aa18.83■□□□□ 0.6
SMC6-206ENST00000446852 SLC35G2Q8TBE7 412 aa18.83■□□□□ 0.6
SMC6-206ENST00000446852 SCFD2Q8WU76 684 aa18.83■□□□□ 0.6
SMC6-206ENST00000446852 CTNNBL1Q8WYA6 563 aaPredicted RBP18.83■□□□□ 0.6
SMC6-206ENST00000446852 CCDC113Q9H0I3 377 aa18.83■□□□□ 0.6
SMC6-206ENST00000446852 ATP8B1O43520 1251 aa18.82■□□□□ 0.6
SMC6-206ENST00000446852 MSCO60682 206 aa18.82■□□□□ 0.6
SMC6-206ENST00000446852 TUBBP07437 444 aa18.82■□□□□ 0.6
SMC6-206ENST00000446852 PAFAH1B1P43034 410 aa18.82■□□□□ 0.6
SMC6-206ENST00000446852 MATR3P43243 847 aaKnown RBP eCLIP18.82■□□□□ 0.6
SMC6-206ENST00000446852 GTF2A2P52657 109 aa18.82■□□□□ 0.6
SMC6-206ENST00000446852 CCNA1P78396 465 aa18.82■□□□□ 0.6
SMC6-206ENST00000446852 CFAP221Q4G0U5 840 aa18.82■□□□□ 0.6
SMC6-206ENST00000446852 CDCA2Q69YH5 1023 aaPredicted RBP18.82■□□□□ 0.6
SMC6-206ENST00000446852 PCDHB18PQ96TA0 734 aa18.82■□□□□ 0.6
SMC6-206ENST00000446852 RBM12Q9NTZ6 932 aaKnown RBP18.82■□□□□ 0.6
SMC6-206ENST00000446852 RBAKQ9NYW8 714 aaPredicted RBP18.82■□□□□ 0.6
SMC6-206ENST00000446852 DIS3Q9Y2L1 958 aaKnown RBP18.82■□□□□ 0.6
SMC6-206ENST00000446852 SLC45A1Q9Y2W3 748 aa18.82■□□□□ 0.6
SMC6-206ENST00000446852 MGAMO43451 1857 aa18.82■□□□□ 0.6
SMC6-206ENST00000446852 ZBTB48P10074 688 aaPredicted RBP18.82■□□□□ 0.6
SMC6-206ENST00000446852 TNNI1P19237 187 aa18.82■□□□□ 0.6
SMC6-206ENST00000446852 PLA2G4AP47712 749 aa18.82■□□□□ 0.6
SMC6-206ENST00000446852 ARHGAP1Q07960 439 aa18.82■□□□□ 0.6
SMC6-206ENST00000446852 RPS6KA1Q15418 735 aa18.82■□□□□ 0.6
SMC6-206ENST00000446852 ZACNQ401N2 412 aa18.82■□□□□ 0.6
SMC6-206ENST00000446852 SEZ6Q53EL9 994 aa18.82■□□□□ 0.6
SMC6-206ENST00000446852 TAF3Q5VWG9 929 aa18.82■□□□□ 0.6
SMC6-206ENST00000446852 TDRD10Q5VZ19 366 aaKnown RBP18.82■□□□□ 0.6
SMC6-206ENST00000446852 TAPT1Q6NXT6 567 aa18.82■□□□□ 0.6
SMC6-206ENST00000446852 ZBTB10Q96DT7 871 aa18.82■□□□□ 0.6
SMC6-206ENST00000446852 FNBP1Q96RU3 617 aa18.82■□□□□ 0.6
SMC6-206ENST00000446852 ANKRD62A6NC57 917 aa18.81■□□□□ 0.6
SMC6-206ENST00000446852 GRIN3BO60391 1043 aa18.81■□□□□ 0.6
SMC6-206ENST00000446852 ERLIN1O75477 346 aa18.81■□□□□ 0.6
SMC6-206ENST00000446852 ZMYND10O75800 440 aa18.81■□□□□ 0.6
SMC6-206ENST00000446852 C4BPAP04003 597 aaKnown RBP18.81■□□□□ 0.6
SMC6-206ENST00000446852 SRGAP2CP0DJJ0 459 aa18.81■□□□□ 0.6
SMC6-206ENST00000446852 ISCUQ9H1K1 167 aa18.81■□□□□ 0.6
SMC6-206ENST00000446852 SMARCAD1Q9H4L7 1026 aa18.81■□□□□ 0.6
SMC6-206ENST00000446852 RNF14Q9UBS8 474 aa18.81■□□□□ 0.6
SMC6-206ENST00000446852 TRPC6Q9Y210 931 aa18.81■□□□□ 0.6
SMC6-206ENST00000446852 STXBP5LQ9Y2K9 1186 aa18.81■□□□□ 0.6
SMC6-206ENST00000446852 ZSWIM8A7E2V4 1837 aa18.81■□□□□ 0.6
SMC6-206ENST00000446852 DAAM2Q86T65 1068 aa18.81■□□□□ 0.6
SMC6-206ENST00000446852 RNF149Q8NC42 400 aa18.81■□□□□ 0.6
SMC6-206ENST00000446852 HDAC7Q8WUI4 952 aa18.81■□□□□ 0.6
SMC6-206ENST00000446852 TCP11Q8WWU5 503 aa18.81■□□□□ 0.6
SMC6-206ENST00000446852 LRRC1Q9BTT6 524 aa18.81■□□□□ 0.6
SMC6-206ENST00000446852 L1RE1Q9UN81 338 aa18.81■□□□□ 0.6
SMC6-206ENST00000446852 COG5Q9UP83 839 aa18.81■□□□□ 0.6
SMC6-206ENST00000446852 ANK1P16157 1881 aa18.8■□□□□ 0.6
SMC6-206ENST00000446852 KCNK3O14649 394 aa18.8■□□□□ 0.6
SMC6-206ENST00000446852 GAS2O43903 313 aaKnown RBP18.8■□□□□ 0.6
SMC6-206ENST00000446852 BUB1BO60566 1050 aaPredicted RBP18.8■□□□□ 0.6
SMC6-206ENST00000446852 VNN1O95497 513 aa18.8■□□□□ 0.6
SMC6-206ENST00000446852 GJB1P08034 283 aa18.8■□□□□ 0.6
SMC6-206ENST00000446852 HARSP12081 509 aaKnown RBP18.8■□□□□ 0.6
SMC6-206ENST00000446852 SLC26A2P50443 739 aa18.8■□□□□ 0.6
SMC6-206ENST00000446852 EFNA5P52803 228 aa18.8■□□□□ 0.6
SMC6-206ENST00000446852 GCNT1Q02742 428 aa18.8■□□□□ 0.6
SMC6-206ENST00000446852 MAMDC4Q6UXC1 1216 aa18.8■□□□□ 0.6
SMC6-206ENST00000446852 ZPBP2Q6X784 338 aa18.8■□□□□ 0.6
SMC6-206ENST00000446852 PEX26Q7Z412 305 aa18.8■□□□□ 0.6
SMC6-206ENST00000446852 NT5DC3Q86UY8 548 aa18.8■□□□□ 0.6
SMC6-206ENST00000446852 GBA2Q9HCG7 927 aaPredicted RBP18.8■□□□□ 0.6
SMC6-206ENST00000446852 MORF4L1Q9UBU8 362 aa18.8■□□□□ 0.6
SMC6-206ENST00000446852 CNTNAP2Q9UHC6 1331 aa18.8■□□□□ 0.6
SMC6-206ENST00000446852 FAM189A1O60320 539 aa18.8■□□□□ 0.6
SMC6-206ENST00000446852 ZC3H11AO75152 810 aaKnown RBP eCLIP18.8■□□□□ 0.6
SMC6-206ENST00000446852 LDHAP00338 332 aaKnown RBP18.8■□□□□ 0.6
SMC6-206ENST00000446852 HLA-DRAP01903 254 aa18.8■□□□□ 0.6
SMC6-206ENST00000446852 FTLP02792 175 aaPredicted RBP18.8■□□□□ 0.6
SMC6-206ENST00000446852 MMEP08473 750 aa18.8■□□□□ 0.6
SMC6-206ENST00000446852 CYP11B1P15538 503 aa18.8■□□□□ 0.6
SMC6-206ENST00000446852 MRPS25P82663 173 aaKnown RBP18.8■□□□□ 0.6
SMC6-206ENST00000446852 FMO1Q01740 532 aa18.8■□□□□ 0.6
SMC6-206ENST00000446852 MXD4Q14582 209 aaPredicted RBP18.8■□□□□ 0.6
SMC6-206ENST00000446852 ANKRD23Q86SG2 305 aa18.8■□□□□ 0.6
SMC6-206ENST00000446852 LMBR1Q8WVP7 490 aa18.8■□□□□ 0.6
SMC6-206ENST00000446852 RNPEPQ9H4A4 650 aa18.8■□□□□ 0.6
SMC6-206ENST00000446852 TAF4BQ92750 862 aa18.79■□□□□ 0.6
SMC6-206ENST00000446852 C1orf112Q9NSG2 853 aa18.79■□□□□ 0.6
SMC6-206ENST00000446852 SUCLA2Q9P2R7 463 aaPredicted RBP18.79■□□□□ 0.6
SMC6-206ENST00000446852 DMGDHQ9UI17 866 aaKnown RBP18.79■□□□□ 0.6
SMC6-206ENST00000446852 CES2O00748 559 aa18.79■□□□□ 0.6
SMC6-206ENST00000446852 MAP2K7O14733 419 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms