RNA–Protein interactions for RNA: ENST00000446851.6

LIN54-203, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 4,083 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-203ENST00000446851 SLC43A3Q8NBI5 491 aa11.18□□□□□ -0.62
LIN54-203ENST00000446851 ACO2Q99798 780 aaKnown RBP11.18□□□□□ -0.62
LIN54-203ENST00000446851 NKX2-4Q9H2Z4 354 aa11.18□□□□□ -0.62
LIN54-203ENST00000446851 PHLPP2Q6ZVD8 1323 aa11.18□□□□□ -0.62
LIN54-203ENST00000446851 LUZP1Q86V48 1076 aa11.17□□□□□ -0.62
LIN54-203ENST00000446851 SPIRE2Q8WWL2 714 aa11.17□□□□□ -0.62
LIN54-203ENST00000446851 P2RX5Q93086 422 aa11.17□□□□□ -0.62
LIN54-203ENST00000446851 TSPY26PQ9H489 355 aa11.17□□□□□ -0.62
LIN54-203ENST00000446851 PDZD7Q9H5P4 517 aa11.17□□□□□ -0.62
LIN54-203ENST00000446851 AGPAT3Q9NRZ7 376 aa11.17□□□□□ -0.62
LIN54-203ENST00000446851 ARMCX3Q9UH62 379 aaPredicted RBP11.17□□□□□ -0.62
LIN54-203ENST00000446851 PPME1Q9Y570 386 aa11.17□□□□□ -0.62
LIN54-203ENST00000446851 PARNO95453 639 aaKnown RBP11.17□□□□□ -0.62
LIN54-203ENST00000446851 ALDH2P05091 517 aa11.17□□□□□ -0.62
LIN54-203ENST00000446851 IFRD2Q12894 506 aaPredicted RBP11.17□□□□□ -0.62
LIN54-203ENST00000446851 SNRNP35Q16560 246 aaKnown RBP11.17□□□□□ -0.62
LIN54-203ENST00000446851 PLEKHG4Q58EX7 1191 aa11.17□□□□□ -0.62
LIN54-203ENST00000446851 ANKRD40Q6AI12 368 aa11.17□□□□□ -0.62
LIN54-203ENST00000446851 APOL5Q9BWW9 433 aa11.17□□□□□ -0.62
LIN54-203ENST00000446851 ENTPD7Q9NQZ7 604 aa11.17□□□□□ -0.62
LIN54-203ENST00000446851 FAN1Q9Y2M0 1017 aa11.17□□□□□ -0.62
LIN54-203ENST00000446851 PCDHB12Q9Y5F1 795 aa11.17□□□□□ -0.62
LIN54-203ENST00000446851 OGTO15294 1046 aa11.17□□□□□ -0.62
LIN54-203ENST00000446851 NOMO2Q5JPE7 1267 aa11.17□□□□□ -0.62
LIN54-203ENST00000446851 ECHDC2Q86YB7 292 aa11.17□□□□□ -0.62
LIN54-203ENST00000446851 GPD1LQ8N335 351 aa11.17□□□□□ -0.62
LIN54-203ENST00000446851 TMEM130Q8N3G9 435 aa11.17□□□□□ -0.62
LIN54-203ENST00000446851 CPLX3Q8WVH0 158 aa11.17□□□□□ -0.62
LIN54-203ENST00000446851 ANP32BQ92688 251 aaKnown RBP11.17□□□□□ -0.62
LIN54-203ENST00000446851 APBB2Q92870 758 aa11.17□□□□□ -0.62
LIN54-203ENST00000446851 JAKMIP2Q96AA8 810 aa11.17□□□□□ -0.62
LIN54-203ENST00000446851 PRIMPOLQ96LW4 560 aa11.17□□□□□ -0.62
LIN54-203ENST00000446851 ARHGAP28Q9P2N2 729 aa11.17□□□□□ -0.62
LIN54-203ENST00000446851 PRRC2BQ5JSZ5 2229 aaKnown RBP11.16□□□□□ -0.62
LIN54-203ENST00000446851 FGFR1OPO95684 399 aaKnown RBP11.16□□□□□ -0.62
LIN54-203ENST00000446851 CETN1Q12798 172 aa11.16□□□□□ -0.62
LIN54-203ENST00000446851 PSMD2Q13200 908 aa11.16□□□□□ -0.62
LIN54-203ENST00000446851 ZNF394Q53GI3 561 aa11.16□□□□□ -0.62
LIN54-203ENST00000446851 B3GALT6Q96L58 329 aa11.16□□□□□ -0.62
LIN54-203ENST00000446851 AGAP1Q9UPQ3 857 aa11.16□□□□□ -0.62
LIN54-203ENST00000446851 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.16□□□□□ -0.62
LIN54-203ENST00000446851 MYL1P05976 194 aa11.16□□□□□ -0.62
LIN54-203ENST00000446851 BFSP1Q12934 665 aa11.16□□□□□ -0.62
LIN54-203ENST00000446851 HERC6Q8IVU3 1022 aa11.16□□□□□ -0.62
LIN54-203ENST00000446851 C18orf25Q96B23 403 aaPredicted RBP11.16□□□□□ -0.62
LIN54-203ENST00000446851 LRCH3Q96II8 777 aa11.16□□□□□ -0.62
LIN54-203ENST00000446851 ANKRD36BP1Q96IX9 119 aa11.16□□□□□ -0.62
LIN54-203ENST00000446851 TMX1Q9H3N1 280 aa11.16□□□□□ -0.62
LIN54-203ENST00000446851 ERVK-5Q9HDB9 667 aa11.16□□□□□ -0.62
LIN54-203ENST00000446851 TAB2Q9NYJ8 693 aa11.16□□□□□ -0.62
LIN54-203ENST00000446851 INSL6Q9Y581 213 aa11.16□□□□□ -0.62
LIN54-203ENST00000446851 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.16□□□□□ -0.62
LIN54-203ENST00000446851 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.16□□□□□ -0.62
LIN54-203ENST00000446851 RHOBTB3O94955 611 aa11.16□□□□□ -0.62
LIN54-203ENST00000446851 CD58P19256 250 aa11.16□□□□□ -0.62
LIN54-203ENST00000446851 NLRP12P59046 1061 aa11.16□□□□□ -0.62
LIN54-203ENST00000446851 FKBP3Q00688 224 aaKnown RBP11.16□□□□□ -0.62
LIN54-203ENST00000446851 ARID5AQ03989 594 aa11.16□□□□□ -0.62
LIN54-203ENST00000446851 KRT17Q04695 432 aa11.16□□□□□ -0.62
LIN54-203ENST00000446851 TMEM132DQ14C87 1099 aa11.16□□□□□ -0.62
LIN54-203ENST00000446851 C16orf59Q7L2K0 433 aa11.16□□□□□ -0.62
LIN54-203ENST00000446851 MLKLQ8NB16 471 aa11.16□□□□□ -0.62
LIN54-203ENST00000446851 GOLGA5Q8TBA6 731 aa11.16□□□□□ -0.62
LIN54-203ENST00000446851 OLFML3Q9NRN5 406 aa11.16□□□□□ -0.62
LIN54-203ENST00000446851 SEPT11Q9NVA2 429 aaKnown RBP11.16□□□□□ -0.62
LIN54-203ENST00000446851 A0A0U1RQF3 1178 aa11.15□□□□□ -0.62
LIN54-203ENST00000446851 LACTBL1A8MY62 500 aa11.15□□□□□ -0.62
LIN54-203ENST00000446851 CLTAP09496 248 aa11.15□□□□□ -0.62
LIN54-203ENST00000446851 SKIP12755 728 aa11.15□□□□□ -0.62
LIN54-203ENST00000446851 HOXA11P31270 313 aaPredicted RBP11.15□□□□□ -0.62
LIN54-203ENST00000446851 ALCAMQ13740 583 aa11.15□□□□□ -0.62
LIN54-203ENST00000446851 TAF12Q16514 161 aa11.15□□□□□ -0.62
LIN54-203ENST00000446851 TRIM71Q2Q1W2 868 aaKnown RBP11.15□□□□□ -0.62
LIN54-203ENST00000446851 C11orf57Q6ZUT1 292 aaPredicted RBP11.15□□□□□ -0.62
LIN54-203ENST00000446851 Q7L0L9 218 aa11.15□□□□□ -0.62
LIN54-203ENST00000446851 KCTD17Q8N5Z5 321 aa11.15□□□□□ -0.62
LIN54-203ENST00000446851 AUTS2Q8WXX7 1259 aa11.15□□□□□ -0.62
LIN54-203ENST00000446851 MTMR12Q9C0I1 747 aa11.15□□□□□ -0.62
LIN54-203ENST00000446851 FZD8Q9H461 694 aa11.15□□□□□ -0.62
LIN54-203ENST00000446851 A0A1B0GUA9 196 aa11.15□□□□□ -0.62
LIN54-203ENST00000446851 LCHNA4D1U4 455 aa11.15□□□□□ -0.62
LIN54-203ENST00000446851 ARL5CA6NH57 179 aa11.15□□□□□ -0.62
LIN54-203ENST00000446851 LETM1O95202 739 aaPredicted RBP11.15□□□□□ -0.62
LIN54-203ENST00000446851 EDN1P05305 212 aa11.15□□□□□ -0.62
LIN54-203ENST00000446851 CD44P16070 742 aaKnown RBP11.15□□□□□ -0.62
LIN54-203ENST00000446851 SP100P23497 879 aaPredicted RBP11.15□□□□□ -0.62
LIN54-203ENST00000446851 PSMC2P35998 433 aaKnown RBP11.15□□□□□ -0.62
LIN54-203ENST00000446851 BMS1Q14692 1282 aaKnown RBP11.15□□□□□ -0.62
LIN54-203ENST00000446851 DCAF4L1Q3SXM0 396 aa11.15□□□□□ -0.62
LIN54-203ENST00000446851 RTN4RL1Q86UN2 441 aaPredicted RBP11.15□□□□□ -0.62
LIN54-203ENST00000446851 PRDM12Q9H4Q4 367 aa11.15□□□□□ -0.62
LIN54-203ENST00000446851 TNFSF13BQ9Y275 285 aa11.15□□□□□ -0.62
LIN54-203ENST00000446851 BRWD1Q9NSI6 2320 aa11.15□□□□□ -0.62
LIN54-203ENST00000446851 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.15□□□□□ -0.62
LIN54-203ENST00000446851 XPOTO43592 962 aaKnown RBP11.15□□□□□ -0.62
LIN54-203ENST00000446851 RAB27AP51159 221 aa11.15□□□□□ -0.62
LIN54-203ENST00000446851 MORC3Q14149 939 aa11.15□□□□□ -0.62
LIN54-203ENST00000446851 MAP4K3Q8IVH8 894 aa11.15□□□□□ -0.62
LIN54-203ENST00000446851 BEST2Q8NFU1 509 aa11.15□□□□□ -0.62
LIN54-203ENST00000446851 TRIM5Q9C035 493 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms