RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 YWHAHQ04917 246 aaPredicted RBP9.06□□□□□ -0.96
PTPN3-204ENST00000446349 CDO1Q16878 200 aa9.06□□□□□ -0.96
PTPN3-204ENST00000446349 PI16Q6UXB8 463 aa9.06□□□□□ -0.96
PTPN3-204ENST00000446349 FBXO41Q8TF61 875 aa9.06□□□□□ -0.96
PTPN3-204ENST00000446349 NR2E3Q9Y5X4 410 aa9.06□□□□□ -0.96
PTPN3-204ENST00000446349 DYNLT1P63172 113 aa9.06□□□□□ -0.96
PTPN3-204ENST00000446349 PPP6R3Q5H9R7 873 aaPredicted RBP9.06□□□□□ -0.96
PTPN3-204ENST00000446349 EFHC1Q5JVL4 640 aa9.06□□□□□ -0.96
PTPN3-204ENST00000446349 GNASQ5JWF2 1037 aa9.06□□□□□ -0.96
PTPN3-204ENST00000446349 CDC42EP5Q6NZY7 148 aa9.06□□□□□ -0.96
PTPN3-204ENST00000446349 TTC30AQ86WT1 665 aa9.06□□□□□ -0.96
PTPN3-204ENST00000446349 FRMD8Q9BZ67 464 aaPredicted RBP9.06□□□□□ -0.96
PTPN3-204ENST00000446349 ASPSCR1Q9BZE9 553 aa9.06□□□□□ -0.96
PTPN3-204ENST00000446349 ZMYND12Q9H0C1 365 aa9.06□□□□□ -0.96
PTPN3-204ENST00000446349 SENP1Q9P0U3 644 aa9.06□□□□□ -0.96
PTPN3-204ENST00000446349 DCTN3O75935 186 aa9.05□□□□□ -0.96
PTPN3-204ENST00000446349 AKR1B1P15121 316 aa9.05□□□□□ -0.96
PTPN3-204ENST00000446349 BCAR1P56945 870 aa9.05□□□□□ -0.96
PTPN3-204ENST00000446349 SLFNL1Q499Z3 407 aa9.05□□□□□ -0.96
PTPN3-204ENST00000446349 SARM1Q6SZW1 724 aa9.05□□□□□ -0.96
PTPN3-204ENST00000446349 LINC00116Q8NCU8 138 aa9.05□□□□□ -0.96
PTPN3-204ENST00000446349 DNERQ8NFT8 737 aa9.05□□□□□ -0.96
PTPN3-204ENST00000446349 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.05□□□□□ -0.96
PTPN3-204ENST00000446349 C18orf8Q96DM3 657 aa9.05□□□□□ -0.96
PTPN3-204ENST00000446349 RTN2O75298 545 aa9.05□□□□□ -0.96
PTPN3-204ENST00000446349 COPS2P61201 443 aa9.05□□□□□ -0.96
PTPN3-204ENST00000446349 ESRRGP62508 458 aa9.05□□□□□ -0.96
PTPN3-204ENST00000446349 SPARCL1Q14515 664 aa9.05□□□□□ -0.96
PTPN3-204ENST00000446349 MAPRE2Q15555 327 aa9.05□□□□□ -0.96
PTPN3-204ENST00000446349 FKBP1CQ5VVH2 108 aa9.05□□□□□ -0.96
PTPN3-204ENST00000446349 CALML6Q8TD86 181 aa9.05□□□□□ -0.96
PTPN3-204ENST00000446349 PBXIP1Q96AQ6 731 aa9.05□□□□□ -0.96
PTPN3-204ENST00000446349 MXRA8Q9BRK3 442 aa9.05□□□□□ -0.96
PTPN3-204ENST00000446349 UVRAGQ9P2Y5 699 aa9.05□□□□□ -0.96
PTPN3-204ENST00000446349 DYNC1LI2O43237 492 aaPredicted RBP9.05□□□□□ -0.96
PTPN3-204ENST00000446349 ICAM1P05362 532 aa9.05□□□□□ -0.96
PTPN3-204ENST00000446349 ARL4DP49703 201 aa9.05□□□□□ -0.96
PTPN3-204ENST00000446349 RAB27AP51159 221 aa9.05□□□□□ -0.96
PTPN3-204ENST00000446349 AP1B1Q10567 949 aa9.05□□□□□ -0.96
PTPN3-204ENST00000446349 TBC1D10CQ8IV04 446 aa9.05□□□□□ -0.96
PTPN3-204ENST00000446349 CFAP61Q8NHU2 1237 aa9.05□□□□□ -0.96
PTPN3-204ENST00000446349 ZNF500O60304 480 aaPredicted RBP9.05□□□□□ -0.96
PTPN3-204ENST00000446349 ESRRBO95718 433 aa9.05□□□□□ -0.96
PTPN3-204ENST00000446349 NR3C2P08235 984 aa9.05□□□□□ -0.96
PTPN3-204ENST00000446349 TPI1P60174 286 aa9.05□□□□□ -0.96
PTPN3-204ENST00000446349 OCRLQ01968 901 aa9.05□□□□□ -0.96
PTPN3-204ENST00000446349 BAATQ14032 418 aaPredicted RBP9.05□□□□□ -0.96
PTPN3-204ENST00000446349 KRT31Q15323 416 aa9.05□□□□□ -0.96
PTPN3-204ENST00000446349 USP50Q70EL3 339 aaPredicted RBP9.05□□□□□ -0.96
PTPN3-204ENST00000446349 PPHLN1Q8NEY8 458 aaKnown RBP9.05□□□□□ -0.96
PTPN3-204ENST00000446349 TEKT2Q9UIF3 430 aa9.05□□□□□ -0.96
PTPN3-204ENST00000446349 PRR12Q9ULL5 1215 aa9.05□□□□□ -0.96
PTPN3-204ENST00000446349 KCNQ2O43526 872 aa9.05□□□□□ -0.96
PTPN3-204ENST00000446349 CYP2C9P11712 490 aa9.05□□□□□ -0.96
PTPN3-204ENST00000446349 ARHGEF7Q14155 803 aa9.05□□□□□ -0.96
PTPN3-204ENST00000446349 EDRF1Q3B7T1 1238 aa9.05□□□□□ -0.96
PTPN3-204ENST00000446349 SEPT8Q92599 483 aa9.05□□□□□ -0.96
PTPN3-204ENST00000446349 SKA1Q96BD8 255 aa9.05□□□□□ -0.96
PTPN3-204ENST00000446349 GPR101Q96P66 508 aaPredicted RBP9.05□□□□□ -0.96
PTPN3-204ENST00000446349 PCDHGB4Q9UN71 923 aa9.05□□□□□ -0.96
PTPN3-204ENST00000446349 SLC4A1P02730 911 aa9.05□□□□□ -0.96
PTPN3-204ENST00000446349 CYP2D6P10635 497 aa9.05□□□□□ -0.96
PTPN3-204ENST00000446349 OAS2P29728 719 aaKnown RBP9.05□□□□□ -0.96
PTPN3-204ENST00000446349 OAZ1P54368 228 aa9.05□□□□□ -0.96
PTPN3-204ENST00000446349 MTFR1Q15390 333 aa9.05□□□□□ -0.96
PTPN3-204ENST00000446349 FAM102AQ5T9C2 384 aaPredicted RBP9.05□□□□□ -0.96
PTPN3-204ENST00000446349 MARCH10Q8NA82 808 aaPredicted RBP9.05□□□□□ -0.96
PTPN3-204ENST00000446349 SH3KBP1Q96B97 665 aa9.05□□□□□ -0.96
PTPN3-204ENST00000446349 PPP1R13BQ96KQ4 1090 aa9.05□□□□□ -0.96
PTPN3-204ENST00000446349 RPL10AP62906 217 aaKnown RBP9.05□□□□□ -0.96
PTPN3-204ENST00000446349 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.05□□□□□ -0.96
PTPN3-204ENST00000446349 CYP4A22Q5TCH4 519 aa9.05□□□□□ -0.96
PTPN3-204ENST00000446349 TDRD10Q5VZ19 366 aaKnown RBP9.05□□□□□ -0.96
PTPN3-204ENST00000446349 ITIH5Q86UX2 942 aa9.05□□□□□ -0.96
PTPN3-204ENST00000446349 SLC35F6Q8N357 371 aa9.05□□□□□ -0.96
PTPN3-204ENST00000446349 DESI2Q9BSY9 194 aa9.05□□□□□ -0.96
PTPN3-204ENST00000446349 NT5C1AQ9BXI3 368 aa9.05□□□□□ -0.96
PTPN3-204ENST00000446349 RNASEH1O60930 286 aaKnown RBP9.04□□□□□ -0.96
PTPN3-204ENST00000446349 NTSR2O95665 410 aa9.04□□□□□ -0.96
PTPN3-204ENST00000446349 SETSIPP0DME0 302 aa9.04□□□□□ -0.96
PTPN3-204ENST00000446349 CYFIP1Q7L576 1253 aa9.04□□□□□ -0.96
PTPN3-204ENST00000446349 FRMD8P1Q9BZ68 369 aaPredicted RBP9.04□□□□□ -0.96
PTPN3-204ENST00000446349 PLEKHA5Q9HAU0 1116 aa9.04□□□□□ -0.96
PTPN3-204ENST00000446349 EPB41L5Q9HCM4 733 aa9.04□□□□□ -0.96
PTPN3-204ENST00000446349 POTECB2RU33 542 aa9.04□□□□□ -0.96
PTPN3-204ENST00000446349 MYCP01106 439 aaPredicted RBP9.04□□□□□ -0.96
PTPN3-204ENST00000446349 PLTPP55058 493 aa9.04□□□□□ -0.96
PTPN3-204ENST00000446349 DHX34Q14147 1143 aaKnown RBP9.04□□□□□ -0.96
PTPN3-204ENST00000446349 DPCR1Q3MIW9 517 aa9.04□□□□□ -0.96
PTPN3-204ENST00000446349 RCOR2Q8IZ40 523 aa9.04□□□□□ -0.96
PTPN3-204ENST00000446349 ZNF564Q8TBZ8 553 aaPredicted RBP9.04□□□□□ -0.96
PTPN3-204ENST00000446349 YY1AP1Q9H869 796 aa9.04□□□□□ -0.96
PTPN3-204ENST00000446349 ARHGAP23Q9P227 1491 aa9.04□□□□□ -0.96
PTPN3-204ENST00000446349 CHUKO15111 745 aa9.04□□□□□ -0.96
PTPN3-204ENST00000446349 LMNAP02545 664 aaKnown RBP9.04□□□□□ -0.96
PTPN3-204ENST00000446349 DPEP1P16444 411 aa9.04□□□□□ -0.96
PTPN3-204ENST00000446349 GCLMP48507 274 aa9.04□□□□□ -0.96
PTPN3-204ENST00000446349 MED21Q13503 144 aa9.04□□□□□ -0.96
PTPN3-204ENST00000446349 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.04□□□□□ -0.96
PTPN3-204ENST00000446349 COPEO14579 308 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms