RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 DLGAP3O95886 979 aa8.33□□□□□ -1.08
SMG1-202ENST00000446231 ADCK1Q86TW2 530 aa8.33□□□□□ -1.08
SMG1-202ENST00000446231 CSRNP1Q96S65 589 aa8.33□□□□□ -1.08
SMG1-202ENST00000446231 AGPAT1Q99943 283 aa8.33□□□□□ -1.08
SMG1-202ENST00000446231 AURKCQ9UQB9 309 aa8.33□□□□□ -1.08
SMG1-202ENST00000446231 RFX1P22670 979 aa8.33□□□□□ -1.08
SMG1-202ENST00000446231 HADHQ16836 314 aaKnown RBP8.33□□□□□ -1.08
SMG1-202ENST00000446231 KCTD21Q4G0X4 260 aa8.33□□□□□ -1.08
SMG1-202ENST00000446231 GJC2Q5T442 439 aaPredicted RBP8.33□□□□□ -1.08
SMG1-202ENST00000446231 DEPDC1BQ8WUY9 529 aa8.33□□□□□ -1.08
SMG1-202ENST00000446231 GREM2Q9H772 168 aa8.33□□□□□ -1.08
SMG1-202ENST00000446231 ANAPC7Q9UJX3 599 aa8.33□□□□□ -1.08
SMG1-202ENST00000446231 A0A0G2JLW4 131 aa8.33□□□□□ -1.08
SMG1-202ENST00000446231 SPOPLQ6IQ16 392 aa8.33□□□□□ -1.08
SMG1-202ENST00000446231 NAT14Q8WUY8 206 aa8.33□□□□□ -1.08
SMG1-202ENST00000446231 MTMR8Q96EF0 704 aa8.33□□□□□ -1.08
SMG1-202ENST00000446231 MAGI3Q5TCQ9 1506 aa8.33□□□□□ -1.08
SMG1-202ENST00000446231 FCHO1O14526 889 aa8.33□□□□□ -1.08
SMG1-202ENST00000446231 KRT4P19013 534 aa8.33□□□□□ -1.08
SMG1-202ENST00000446231 LBRQ14739 615 aaKnown RBP8.33□□□□□ -1.08
SMG1-202ENST00000446231 PCDHA6Q9UN73 950 aa8.33□□□□□ -1.08
SMG1-202ENST00000446231 PCDHA8Q9Y5H6 950 aa8.33□□□□□ -1.08
SMG1-202ENST00000446231 ZSCAN5CA6NGD5 496 aaPredicted RBP8.32□□□□□ -1.08
SMG1-202ENST00000446231 MXI1P50539 228 aa8.32□□□□□ -1.08
SMG1-202ENST00000446231 INAQ16352 499 aa8.32□□□□□ -1.08
SMG1-202ENST00000446231 EME1Q96AY2 570 aa8.32□□□□□ -1.08
SMG1-202ENST00000446231 FAF2Q96CS3 445 aa8.32□□□□□ -1.08
SMG1-202ENST00000446231 PHACTR1Q9C0D0 580 aa8.32□□□□□ -1.08
SMG1-202ENST00000446231 MYO9BQ13459 2157 aa8.32□□□□□ -1.08
SMG1-202ENST00000446231 SLC1A1P43005 524 aa8.32□□□□□ -1.08
SMG1-202ENST00000446231 EIF6P56537 245 aaKnown RBP8.32□□□□□ -1.08
SMG1-202ENST00000446231 SEMA6BQ9H3T3 888 aa8.32□□□□□ -1.08
SMG1-202ENST00000446231 SSX2IPQ9Y2D8 614 aa8.32□□□□□ -1.08
SMG1-202ENST00000446231 PLEKHG1Q9ULL1 1385 aa8.32□□□□□ -1.08
SMG1-202ENST00000446231 NPHP3-ACAD11A0A0J9YXS1 232 aa8.32□□□□□ -1.08
SMG1-202ENST00000446231 TTLL1O95922 423 aa8.32□□□□□ -1.08
SMG1-202ENST00000446231 MRPS15P82914 257 aaKnown RBP8.32□□□□□ -1.08
SMG1-202ENST00000446231 GRIK3Q13003 919 aa8.32□□□□□ -1.08
SMG1-202ENST00000446231 PDIA5Q14554 519 aa8.32□□□□□ -1.08
SMG1-202ENST00000446231 C17orf50Q8WW18 174 aa8.32□□□□□ -1.08
SMG1-202ENST00000446231 MYO18AQ92614 2054 aaKnown RBP8.32□□□□□ -1.08
SMG1-202ENST00000446231 H7C1W4 665 aa8.32□□□□□ -1.08
SMG1-202ENST00000446231 SERPINI2O75830 405 aa8.32□□□□□ -1.08
SMG1-202ENST00000446231 FOSP01100 380 aaPredicted RBP8.32□□□□□ -1.08
SMG1-202ENST00000446231 SPDYCQ5MJ68 293 aa8.32□□□□□ -1.08
SMG1-202ENST00000446231 PLD3Q8IV08 490 aa8.32□□□□□ -1.08
SMG1-202ENST00000446231 RBM41Q96IZ5 413 aaKnown RBP8.32□□□□□ -1.08
SMG1-202ENST00000446231 ZSWIM1Q9BR11 485 aa8.32□□□□□ -1.08
SMG1-202ENST00000446231 A8MUI8 341 aa8.32□□□□□ -1.08
SMG1-202ENST00000446231 SNX3O60493 162 aa8.32□□□□□ -1.08
SMG1-202ENST00000446231 LGR5O75473 907 aa8.32□□□□□ -1.08
SMG1-202ENST00000446231 KLRC1P26715 233 aa8.32□□□□□ -1.08
SMG1-202ENST00000446231 ASAP3Q8TDY4 903 aa8.32□□□□□ -1.08
SMG1-202ENST00000446231 KANSL2Q9H9L4 492 aa8.32□□□□□ -1.08
SMG1-202ENST00000446231 XDHP47989 1333 aa8.32□□□□□ -1.08
SMG1-202ENST00000446231 DYTNA2CJ06 578 aa8.32□□□□□ -1.08
SMG1-202ENST00000446231 CEP55Q53EZ4 464 aa8.32□□□□□ -1.08
SMG1-202ENST00000446231 APOL6Q9BWW8 343 aa8.32□□□□□ -1.08
SMG1-202ENST00000446231 TBC1D10AQ9BXI6 508 aa8.32□□□□□ -1.08
SMG1-202ENST00000446231 NDEL1Q9GZM8 345 aa8.32□□□□□ -1.08
SMG1-202ENST00000446231 CTNNAL1Q9UBT7 734 aa8.32□□□□□ -1.08
SMG1-202ENST00000446231 ARHGAP26Q9UNA1 814 aa8.32□□□□□ -1.08
SMG1-202ENST00000446231 H0YCG3 227 aa8.32□□□□□ -1.08
SMG1-202ENST00000446231 PICALMQ13492 652 aa8.32□□□□□ -1.08
SMG1-202ENST00000446231 ZC3H7BQ9UGR2 993 aaKnown RBP8.32□□□□□ -1.08
SMG1-202ENST00000446231 ARSEP51690 589 aa8.32□□□□□ -1.08
SMG1-202ENST00000446231 PRPSAP1Q14558 356 aa8.32□□□□□ -1.08
SMG1-202ENST00000446231 PDZD4Q76G19 769 aaPredicted RBP8.32□□□□□ -1.08
SMG1-202ENST00000446231 FBXL16Q8N461 479 aa8.32□□□□□ -1.08
SMG1-202ENST00000446231 DCLK2Q8N568 766 aa8.32□□□□□ -1.08
SMG1-202ENST00000446231 ALG6Q9Y672 507 aa8.32□□□□□ -1.08
SMG1-202ENST00000446231 CHI3L2Q15782 390 aa8.32□□□□□ -1.08
SMG1-202ENST00000446231 TRIM50Q86XT4 487 aa8.32□□□□□ -1.08
SMG1-202ENST00000446231 RBM46Q8TBY0 533 aaKnown RBP8.32□□□□□ -1.08
SMG1-202ENST00000446231 UCHL3P15374 230 aa8.32□□□□□ -1.08
SMG1-202ENST00000446231 GYG1P46976 350 aa8.32□□□□□ -1.08
SMG1-202ENST00000446231 C3orf62Q6ZUJ4 267 aa8.32□□□□□ -1.08
SMG1-202ENST00000446231 SRBD1Q8N5C6 995 aaKnown RBP8.32□□□□□ -1.08
SMG1-202ENST00000446231 GRIP2Q9C0E4 1043 aa8.32□□□□□ -1.08
SMG1-202ENST00000446231 PLGRKTQ9HBL7 147 aa8.32□□□□□ -1.08
SMG1-202ENST00000446231 C21orf59P57076 290 aa8.32□□□□□ -1.08
SMG1-202ENST00000446231 SLC13A5Q86YT5 568 aaPredicted RBP8.32□□□□□ -1.08
SMG1-202ENST00000446231 PBXIP1Q96AQ6 731 aa8.32□□□□□ -1.08
SMG1-202ENST00000446231 TLK1Q9UKI8 766 aa8.32□□□□□ -1.08
SMG1-202ENST00000446231 RAP1GDS1P52306 607 aa8.32□□□□□ -1.08
SMG1-202ENST00000446231 C1orf228Q6PIY5 440 aa8.32□□□□□ -1.08
SMG1-202ENST00000446231 H0Y626 953 aa8.31□□□□□ -1.08
SMG1-202ENST00000446231 CES2O00748 559 aa8.31□□□□□ -1.08
SMG1-202ENST00000446231 CBFA2T3O75081 653 aa8.31□□□□□ -1.08
SMG1-202ENST00000446231 TRIM16O95361 564 aa8.31□□□□□ -1.08
SMG1-202ENST00000446231 ITGA9Q13797 1035 aa8.31□□□□□ -1.08
SMG1-202ENST00000446231 GRM4Q14833 912 aa8.31□□□□□ -1.08
SMG1-202ENST00000446231 PARP6Q2NL67 630 aa8.31□□□□□ -1.08
SMG1-202ENST00000446231 ZNF554Q86TJ5 538 aa8.31□□□□□ -1.08
SMG1-202ENST00000446231 VPS50Q96JG6 964 aa8.31□□□□□ -1.08
SMG1-202ENST00000446231 PHF20Q9BVI0 1012 aa8.31□□□□□ -1.08
SMG1-202ENST00000446231 SETD1BQ9UPS6 1966 aaKnown RBP8.31□□□□□ -1.08
SMG1-202ENST00000446231 UHRF1BP1LA0JNW5 1464 aa8.31□□□□□ -1.08
SMG1-202ENST00000446231 VAV1P15498 845 aa8.31□□□□□ -1.08
SMG1-202ENST00000446231 RASA2Q15283 850 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms