RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 OR14A2Q96R54 314 aa5.68□□□□□ -1.5
HMGB1P48-201ENST00000446155 MPHOSPH6Q99547 160 aaKnown RBP5.68□□□□□ -1.5
HMGB1P48-201ENST00000446155 PDCD2LQ9BRP1 358 aa5.68□□□□□ -1.5
HMGB1P48-201ENST00000446155 SAP30BPQ9UHR5 308 aaKnown RBP5.68□□□□□ -1.5
HMGB1P48-201ENST00000446155 SH3BP1Q9Y3L3 701 aa5.68□□□□□ -1.5
HMGB1P48-201ENST00000446155 HOXA3O43365 443 aaPredicted RBP5.67□□□□□ -1.5
HMGB1P48-201ENST00000446155 PRPF3O43395 683 aaKnown RBP5.67□□□□□ -1.5
HMGB1P48-201ENST00000446155 SGTAO43765 313 aa5.67□□□□□ -1.5
HMGB1P48-201ENST00000446155 ALOX15P16050 662 aaPredicted RBP5.67□□□□□ -1.5
HMGB1P48-201ENST00000446155 LPOP22079 712 aaPredicted RBP5.67□□□□□ -1.5
HMGB1P48-201ENST00000446155 FXR1P51114 621 aaKnown RBP eCLIP5.67□□□□□ -1.5
HMGB1P48-201ENST00000446155 CTSWP56202 376 aa5.67□□□□□ -1.5
HMGB1P48-201ENST00000446155 DSC2Q02487 901 aa5.67□□□□□ -1.5
HMGB1P48-201ENST00000446155 TARDBPQ13148 414 aaKnown RBP eCLIP5.67□□□□□ -1.5
HMGB1P48-201ENST00000446155 BRD3Q15059 726 aa5.67□□□□□ -1.5
HMGB1P48-201ENST00000446155 FAM214AQ32MH5 1076 aa5.67□□□□□ -1.5
HMGB1P48-201ENST00000446155 UAP1L1Q3KQV9 507 aa5.67□□□□□ -1.5
HMGB1P48-201ENST00000446155 C4orf46Q504U0 113 aa5.67□□□□□ -1.5
HMGB1P48-201ENST00000446155 MFSD14BQ5SR56 506 aa5.67□□□□□ -1.5
HMGB1P48-201ENST00000446155 CXorf57Q6NSI4 855 aaKnown RBP5.67□□□□□ -1.5
HMGB1P48-201ENST00000446155 LILRA6Q6PI73 481 aa5.67□□□□□ -1.5
HMGB1P48-201ENST00000446155 MAMDC4Q6UXC1 1216 aa5.67□□□□□ -1.5
HMGB1P48-201ENST00000446155 TPH2Q8IWU9 490 aa5.67□□□□□ -1.5
HMGB1P48-201ENST00000446155 TCEAL8Q8IYN2 117 aa5.67□□□□□ -1.5
HMGB1P48-201ENST00000446155 PQLC1Q8N2U9 271 aa5.67□□□□□ -1.5
HMGB1P48-201ENST00000446155 MIER2Q8N344 545 aa5.67□□□□□ -1.5
HMGB1P48-201ENST00000446155 ZGPATQ8N5A5 531 aaKnown RBP5.67□□□□□ -1.5
HMGB1P48-201ENST00000446155 TTC9BQ8N6N2 239 aa5.67□□□□□ -1.5
HMGB1P48-201ENST00000446155 REPS2Q8NFH8 660 aa5.67□□□□□ -1.5
HMGB1P48-201ENST00000446155 HDAC10Q969S8 669 aa5.67□□□□□ -1.5
HMGB1P48-201ENST00000446155 CEP95Q96GE4 821 aa5.67□□□□□ -1.5
HMGB1P48-201ENST00000446155 AIFM3Q96NN9 605 aa5.67□□□□□ -1.5
HMGB1P48-201ENST00000446155 SAMD11Q96NU1 681 aa5.67□□□□□ -1.5
HMGB1P48-201ENST00000446155 MPHOSPH9Q99550 1183 aa5.67□□□□□ -1.5
HMGB1P48-201ENST00000446155 C7orf25Q9BPX7 421 aa5.67□□□□□ -1.5
HMGB1P48-201ENST00000446155 GTPBP4Q9BZE4 634 aaKnown RBP5.67□□□□□ -1.5
HMGB1P48-201ENST00000446155 NCDNQ9UBB6 729 aa5.67□□□□□ -1.5
HMGB1P48-201ENST00000446155 ZMYM3Q14202 1370 aa5.67□□□□□ -1.5
HMGB1P48-201ENST00000446155 ZNF623O75123 536 aa5.66□□□□□ -1.5
HMGB1P48-201ENST00000446155 LDHAP00338 332 aaKnown RBP5.66□□□□□ -1.5
HMGB1P48-201ENST00000446155 PDCP20941 246 aa5.66□□□□□ -1.5
HMGB1P48-201ENST00000446155 CYP2C19P33261 490 aa5.66□□□□□ -1.5
HMGB1P48-201ENST00000446155 MSX2P35548 267 aaPredicted RBP5.66□□□□□ -1.5
HMGB1P48-201ENST00000446155 FLT3LGP49771 235 aa5.66□□□□□ -1.5
HMGB1P48-201ENST00000446155 APBA1Q02410 837 aa5.66□□□□□ -1.5
HMGB1P48-201ENST00000446155 SP140Q13342 867 aa5.66□□□□□ -1.5
HMGB1P48-201ENST00000446155 MTM1Q13496 603 aa5.66□□□□□ -1.5
HMGB1P48-201ENST00000446155 IL10RAQ13651 578 aa5.66□□□□□ -1.5
HMGB1P48-201ENST00000446155 FKBP15Q5T1M5 1219 aa5.66□□□□□ -1.5
HMGB1P48-201ENST00000446155 LCE4AQ5TA78 99 aa5.66□□□□□ -1.5
HMGB1P48-201ENST00000446155 B3GNT9Q6UX72 402 aa5.66□□□□□ -1.5
HMGB1P48-201ENST00000446155 USP45Q70EL2 814 aa5.66□□□□□ -1.5
HMGB1P48-201ENST00000446155 DOK3Q7L591 496 aa5.66□□□□□ -1.5
HMGB1P48-201ENST00000446155 EPM2AIP1Q7L775 607 aaPredicted RBP5.66□□□□□ -1.5
HMGB1P48-201ENST00000446155 GPRIN1Q7Z2K8 1008 aa5.66□□□□□ -1.5
HMGB1P48-201ENST00000446155 CATIPQ7Z7H3 387 aa5.66□□□□□ -1.5
HMGB1P48-201ENST00000446155 OR5M3Q8NGP4 307 aa5.66□□□□□ -1.5
HMGB1P48-201ENST00000446155 MDM1Q8TC05 714 aa5.66□□□□□ -1.5
HMGB1P48-201ENST00000446155 NSUN6Q8TEA1 469 aaKnown RBP5.66□□□□□ -1.5
HMGB1P48-201ENST00000446155 CASKIN2Q8WXE0 1202 aa5.66□□□□□ -1.5
HMGB1P48-201ENST00000446155 HPS3Q969F9 1004 aa5.66□□□□□ -1.5
HMGB1P48-201ENST00000446155 EVI5LQ96CN4 794 aa5.66□□□□□ -1.5
HMGB1P48-201ENST00000446155 CYFIP2Q96F07 1278 aa5.66□□□□□ -1.5
HMGB1P48-201ENST00000446155 TMEM176AQ96HP8 235 aa5.66□□□□□ -1.5
HMGB1P48-201ENST00000446155 ZNF512Q96ME7 567 aaPredicted RBP5.66□□□□□ -1.5
HMGB1P48-201ENST00000446155 DMRTA2Q96SC8 542 aa5.66□□□□□ -1.5
HMGB1P48-201ENST00000446155 CDC5LQ99459 802 aaKnown RBP5.66□□□□□ -1.5
HMGB1P48-201ENST00000446155 LSM14BQ9BX40 385 aaKnown RBP5.66□□□□□ -1.5
HMGB1P48-201ENST00000446155 KRTAP3-1Q9BYR8 98 aa5.66□□□□□ -1.5
HMGB1P48-201ENST00000446155 CHST12Q9NRB3 414 aa5.66□□□□□ -1.5
HMGB1P48-201ENST00000446155 LANCL2Q9NS86 450 aa5.66□□□□□ -1.5
HMGB1P48-201ENST00000446155 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.66□□□□□ -1.5
HMGB1P48-201ENST00000446155 NOB1Q9ULX3 412 aaKnown RBP5.66□□□□□ -1.5
HMGB1P48-201ENST00000446155 PCDHB1Q9Y5F3 818 aa5.66□□□□□ -1.5
HMGB1P48-201ENST00000446155 PCDHA13Q9Y5I0 950 aa5.66□□□□□ -1.5
HMGB1P48-201ENST00000446155 CFAP20Q9Y6A4 193 aaKnown RBP5.66□□□□□ -1.5
HMGB1P48-201ENST00000446155 GOLGA6CA6NDK9 693 aa5.65□□□□□ -1.5
HMGB1P48-201ENST00000446155 GOLGA6BA6NDN3 693 aa5.65□□□□□ -1.5
HMGB1P48-201ENST00000446155 GOLGA6DP0CG33 693 aa5.65□□□□□ -1.5
HMGB1P48-201ENST00000446155 PCSK1P29120 753 aa5.65□□□□□ -1.5
HMGB1P48-201ENST00000446155 CDC42EP1Q00587 391 aa5.65□□□□□ -1.5
HMGB1P48-201ENST00000446155 MLC1Q15049 377 aa5.65□□□□□ -1.5
HMGB1P48-201ENST00000446155 CSRP2Q16527 193 aa5.65□□□□□ -1.5
HMGB1P48-201ENST00000446155 FAM47AQ5JRC9 791 aa5.65□□□□□ -1.5
HMGB1P48-201ENST00000446155 ATAT1Q5SQI0 421 aa5.65□□□□□ -1.5
HMGB1P48-201ENST00000446155 C1QL3Q5VWW1 255 aa5.65□□□□□ -1.5
HMGB1P48-201ENST00000446155 SPTY2D1Q68D10 685 aaPredicted RBP5.65□□□□□ -1.5
HMGB1P48-201ENST00000446155 MFSD5Q6N075 450 aa5.65□□□□□ -1.5
HMGB1P48-201ENST00000446155 SLC4A10Q6U841 1118 aa5.65□□□□□ -1.5
HMGB1P48-201ENST00000446155 KSR2Q6VAB6 950 aa5.65□□□□□ -1.5
HMGB1P48-201ENST00000446155 PDZD4Q76G19 769 aaPredicted RBP5.65□□□□□ -1.5
HMGB1P48-201ENST00000446155 MIGA2Q7L4E1 593 aa5.65□□□□□ -1.5
HMGB1P48-201ENST00000446155 MAGEB6Q8N7X4 407 aa5.65□□□□□ -1.5
HMGB1P48-201ENST00000446155 IFI44Q8TCB0 444 aa5.65□□□□□ -1.5
HMGB1P48-201ENST00000446155 KAT5Q92993 513 aa5.65□□□□□ -1.5
HMGB1P48-201ENST00000446155 MRGPRX4Q96LA9 322 aa5.65□□□□□ -1.5
HMGB1P48-201ENST00000446155 UBA5Q9GZZ9 404 aa5.65□□□□□ -1.5
HMGB1P48-201ENST00000446155 ZNF700Q9H0M5 742 aa5.65□□□□□ -1.5
HMGB1P48-201ENST00000446155 LDAHQ9H6V9 325 aa5.65□□□□□ -1.5
HMGB1P48-201ENST00000446155 MANSC1Q9H8J5 431 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms