RNA–Protein interactions for RNA: ENST00000445866.6

SGCE-206, Transcript of sarcoglycan epsilon, humanhuman

TSL 5 BASIC

Gene SGCE, Length 1,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-206ENST00000445866 THAP9Q9H5L6 903 aa18.96■□□□□ 0.63
SGCE-206ENST00000445866 C1orf112Q9NSG2 853 aa18.96■□□□□ 0.63
SGCE-206ENST00000445866 PARP2Q9UGN5 583 aa18.96■□□□□ 0.63
SGCE-206ENST00000445866 ABHD14A-ACY1A0A1B0GW23 586 aa18.95■□□□□ 0.62
SGCE-206ENST00000445866 C9IYK1 514 aa18.95■□□□□ 0.62
SGCE-206ENST00000445866 GOLGA6L19H0YKK7 550 aa18.95■□□□□ 0.62
SGCE-206ENST00000445866 EPB41P11171 864 aaKnown RBP18.95■□□□□ 0.62
SGCE-206ENST00000445866 ACTN1P12814 892 aa18.95■□□□□ 0.62
SGCE-206ENST00000445866 CDK11BP21127 795 aaKnown RBP18.95■□□□□ 0.62
SGCE-206ENST00000445866 AKAP5P24588 427 aa18.95■□□□□ 0.62
SGCE-206ENST00000445866 TNFSF9P41273 254 aa18.95■□□□□ 0.62
SGCE-206ENST00000445866 GRM5P41594 1212 aa18.95■□□□□ 0.62
SGCE-206ENST00000445866 RAB27AP51159 221 aa18.95■□□□□ 0.62
SGCE-206ENST00000445866 SNRNP35Q16560 246 aaKnown RBP18.95■□□□□ 0.62
SGCE-206ENST00000445866 ZNF365Q70YC5 407 aa18.95■□□□□ 0.62
SGCE-206ENST00000445866 MRPL10Q7Z7H8 261 aaKnown RBP18.95■□□□□ 0.62
SGCE-206ENST00000445866 ECHDC2Q86YB7 292 aa18.95■□□□□ 0.62
SGCE-206ENST00000445866 TMEM192Q8IY95 271 aa18.95■□□□□ 0.62
SGCE-206ENST00000445866 FAM186BQ8IYM0 893 aa18.95■□□□□ 0.62
SGCE-206ENST00000445866 LINC01599Q8WXQ3 324 aa18.95■□□□□ 0.62
SGCE-206ENST00000445866 FAM212AQ96EL1 285 aa18.95■□□□□ 0.62
SGCE-206ENST00000445866 FBXL18Q96ME1 805 aa18.95■□□□□ 0.62
SGCE-206ENST00000445866 NXF3Q9H4D5 531 aaKnown RBP18.95■□□□□ 0.62
SGCE-206ENST00000445866 RPF1Q9H9Y2 349 aaKnown RBP18.95■□□□□ 0.62
SGCE-206ENST00000445866 TRIP12Q14669 1992 aaPredicted RBP18.95■□□□□ 0.62
SGCE-206ENST00000445866 LOXHD1Q8IVV2 1947 aa18.95■□□□□ 0.62
SGCE-206ENST00000445866 FAM189A1O60320 539 aa18.95■□□□□ 0.62
SGCE-206ENST00000445866 GNA14O95837 355 aa18.95■□□□□ 0.62
SGCE-206ENST00000445866 ITGA4P13612 1032 aa18.95■□□□□ 0.62
SGCE-206ENST00000445866 TPM4P67936 248 aa18.95■□□□□ 0.62
SGCE-206ENST00000445866 OTOP2Q7RTS6 562 aa18.95■□□□□ 0.62
SGCE-206ENST00000445866 PGBD4Q96DM1 585 aa18.95■□□□□ 0.62
SGCE-206ENST00000445866 RBSNQ9H1K0 784 aa18.95■□□□□ 0.62
SGCE-206ENST00000445866 MAGEC2Q9UBF1 373 aaPredicted RBP18.95■□□□□ 0.62
SGCE-206ENST00000445866 CPSF3Q9UKF6 684 aaKnown RBP18.95■□□□□ 0.62
SGCE-206ENST00000445866 ARID2Q68CP9 1835 aa18.94■□□□□ 0.62
SGCE-206ENST00000445866 EVPLQ92817 2033 aa18.94■□□□□ 0.62
SGCE-206ENST00000445866 EOMESO95936 686 aa18.94■□□□□ 0.62
SGCE-206ENST00000445866 YARSP54577 528 aaKnown RBP18.94■□□□□ 0.62
SGCE-206ENST00000445866 EPHB4P54760 987 aa18.94■□□□□ 0.62
SGCE-206ENST00000445866 CCDC40Q4G0X9 1142 aa18.94■□□□□ 0.62
SGCE-206ENST00000445866 IRF2BP1Q8IU81 584 aa18.94■□□□□ 0.62
SGCE-206ENST00000445866 LPPQ93052 612 aa18.94■□□□□ 0.62
SGCE-206ENST00000445866 RBAKQ9NYW8 714 aaPredicted RBP18.94■□□□□ 0.62
SGCE-206ENST00000445866 PCDHB7Q9Y5E2 793 aa18.94■□□□□ 0.62
SGCE-206ENST00000445866 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.93■□□□□ 0.62
SGCE-206ENST00000445866 SLC16A3O15427 465 aaKnown RBP18.93■□□□□ 0.62
SGCE-206ENST00000445866 ENOX2Q16206 610 aaKnown RBP18.93■□□□□ 0.62
SGCE-206ENST00000445866 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.93■□□□□ 0.62
SGCE-206ENST00000445866 FRMD5Q7Z6J6 570 aa18.93■□□□□ 0.62
SGCE-206ENST00000445866 FAM114A1Q8IWE2 563 aa18.93■□□□□ 0.62
SGCE-206ENST00000445866 MFSD14AQ96MC6 490 aa18.93■□□□□ 0.62
SGCE-206ENST00000445866 MKNK1Q9BUB5 465 aa18.93■□□□□ 0.62
SGCE-206ENST00000445866 ARMCX3Q9UH62 379 aaPredicted RBP18.93■□□□□ 0.62
SGCE-206ENST00000445866 LRFN2Q9ULH4 789 aa18.93■□□□□ 0.62
SGCE-206ENST00000445866 EFCAB14O75071 495 aa18.92■□□□□ 0.62
SGCE-206ENST00000445866 KRT13P13646 458 aa18.92■□□□□ 0.62
SGCE-206ENST00000445866 RGS19P49795 217 aa18.92■□□□□ 0.62
SGCE-206ENST00000445866 CYP24A1Q07973 514 aa18.92■□□□□ 0.62
SGCE-206ENST00000445866 TMEM240Q5SV17 173 aa18.92■□□□□ 0.62
SGCE-206ENST00000445866 CCDC127Q96BQ5 260 aa18.92■□□□□ 0.62
SGCE-206ENST00000445866 METTL14Q9HCE5 456 aaKnown RBP18.92■□□□□ 0.62
SGCE-206ENST00000445866 RNF216Q9NWF9 866 aaPredicted RBP18.92■□□□□ 0.62
SGCE-206ENST00000445866 KLK14Q9P0G3 267 aa18.92■□□□□ 0.62
SGCE-206ENST00000445866 ZBBXA8MT70 800 aa18.92■□□□□ 0.62
SGCE-206ENST00000445866 LACTBL1A8MY62 500 aa18.92■□□□□ 0.62
SGCE-206ENST00000445866 MAPK13O15264 365 aa18.92■□□□□ 0.62
SGCE-206ENST00000445866 RECQL4O94761 1208 aa18.92■□□□□ 0.62
SGCE-206ENST00000445866 ADRB2P07550 413 aa18.92■□□□□ 0.62
SGCE-206ENST00000445866 CXCL8P10145 99 aa18.92■□□□□ 0.62
SGCE-206ENST00000445866 POU5F1Q01860 360 aaKnown RBP18.92■□□□□ 0.62
SGCE-206ENST00000445866 SLC10A6Q3KNW5 377 aa18.92■□□□□ 0.62
SGCE-206ENST00000445866 PSRC1Q6PGN9 363 aaPredicted RBP18.92■□□□□ 0.62
SGCE-206ENST00000445866 INTS8Q75QN2 995 aaKnown RBP18.92■□□□□ 0.62
SGCE-206ENST00000445866 ZNF598Q86UK7 904 aaKnown RBP18.92■□□□□ 0.62
SGCE-206ENST00000445866 BORCS6Q96GS4 357 aa18.92■□□□□ 0.62
SGCE-206ENST00000445866 CNOT6LQ96LI5 555 aaKnown RBP18.92■□□□□ 0.62
SGCE-206ENST00000445866 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.92■□□□□ 0.62
SGCE-206ENST00000445866 PDE11AQ9HCR9 933 aa18.92■□□□□ 0.62
SGCE-206ENST00000445866 UBN1Q9NPG3 1134 aa18.92■□□□□ 0.62
SGCE-206ENST00000445866 TOPORSQ9NS56 1045 aaPredicted RBP18.92■□□□□ 0.62
SGCE-206ENST00000445866 TMEM161AQ9NX61 479 aa18.92■□□□□ 0.62
SGCE-206ENST00000445866 MEIS3P2A8K0S8 358 aa18.91■□□□□ 0.62
SGCE-206ENST00000445866 KCNJ18B7U540 433 aa18.91■□□□□ 0.62
SGCE-206ENST00000445866 BAIAP3O94812 1187 aa18.91■□□□□ 0.62
SGCE-206ENST00000445866 UPP2O95045 317 aa18.91■□□□□ 0.62
SGCE-206ENST00000445866 ATF7P17544 494 aaPredicted RBP18.91■□□□□ 0.62
SGCE-206ENST00000445866 MAGEA10P43363 369 aaPredicted RBP18.91■□□□□ 0.62
SGCE-206ENST00000445866 MTIF2P46199 727 aaKnown RBP18.91■□□□□ 0.62
SGCE-206ENST00000445866 KCNJ12Q14500 433 aa18.91■□□□□ 0.62
SGCE-206ENST00000445866 TCP11X2Q5H9J9 407 aa18.91■□□□□ 0.62
SGCE-206ENST00000445866 CDKAL1Q5VV42 579 aa18.91■□□□□ 0.62
SGCE-206ENST00000445866 AGMOQ6ZNB7 445 aa18.91■□□□□ 0.62
SGCE-206ENST00000445866 BRSK2Q8IWQ3 736 aa18.91■□□□□ 0.62
SGCE-206ENST00000445866 FNBP1Q96RU3 617 aa18.91■□□□□ 0.62
SGCE-206ENST00000445866 HSD3B7Q9H2F3 369 aa18.91■□□□□ 0.62
SGCE-206ENST00000445866 ELAC1Q9H777 363 aaKnown RBP18.91■□□□□ 0.62
SGCE-206ENST00000445866 PLEKHA5Q9HAU0 1116 aa18.91■□□□□ 0.62
SGCE-206ENST00000445866 RNF19AQ9NV58 838 aa18.91■□□□□ 0.62
SGCE-206ENST00000445866 GIT1Q9Y2X7 761 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms