RNA–Protein interactions for RNA: ENST00000445064.1

SEC13-213, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5

Gene SEC13, Length 669 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-213ENST00000445064 PIDD1Q9HB75 910 aa17.07■□□□□ 0.32
SEC13-213ENST00000445064 FNIP2Q9P278 1114 aa17.07■□□□□ 0.32
SEC13-213ENST00000445064 ARHGEF35A5YM69 484 aa17.06■□□□□ 0.32
SEC13-213ENST00000445064 CASTOR2A6NHX0 329 aa17.06■□□□□ 0.32
SEC13-213ENST00000445064 N4BP3O15049 544 aa17.06■□□□□ 0.32
SEC13-213ENST00000445064 PI15O43692 258 aa17.06■□□□□ 0.32
SEC13-213ENST00000445064 NARSO43776 548 aaKnown RBP17.06■□□□□ 0.32
SEC13-213ENST00000445064 CLCN5P51795 746 aa17.06■□□□□ 0.32
SEC13-213ENST00000445064 TUSC3Q13454 348 aa17.06■□□□□ 0.32
SEC13-213ENST00000445064 PRPF4BQ13523 1007 aaKnown RBP17.06■□□□□ 0.32
SEC13-213ENST00000445064 HSP90AA2PQ14568 343 aaPredicted RBP17.06■□□□□ 0.32
SEC13-213ENST00000445064 ECM1Q16610 540 aa17.06■□□□□ 0.32
SEC13-213ENST00000445064 MYADMQ96S97 322 aa17.06■□□□□ 0.32
SEC13-213ENST00000445064 C2orf40Q9H1Z8 148 aa17.06■□□□□ 0.32
SEC13-213ENST00000445064 FOXP1Q9H334 677 aaPredicted RBP17.06■□□□□ 0.32
SEC13-213ENST00000445064 PLEKHA4Q9H4M7 779 aa17.06■□□□□ 0.32
SEC13-213ENST00000445064 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.06■□□□□ 0.32
SEC13-213ENST00000445064 IGSF9Q9P2J2 1179 aa17.06■□□□□ 0.32
SEC13-213ENST00000445064 DUSP12Q9UNI6 340 aa17.06■□□□□ 0.32
SEC13-213ENST00000445064 CLUHO75153 1309 aa17.05■□□□□ 0.32
SEC13-213ENST00000445064 ACKR2O00590 384 aa17.05■□□□□ 0.32
SEC13-213ENST00000445064 PTGESO14684 152 aa17.05■□□□□ 0.32
SEC13-213ENST00000445064 GFRA3O60609 400 aa17.05■□□□□ 0.32
SEC13-213ENST00000445064 EIF5BO60841 1220 aaKnown RBP17.05■□□□□ 0.32
SEC13-213ENST00000445064 EDN1P05305 212 aa17.05■□□□□ 0.32
SEC13-213ENST00000445064 PRKCBP05771 671 aa17.05■□□□□ 0.32
SEC13-213ENST00000445064 THP07101 528 aa17.05■□□□□ 0.32
SEC13-213ENST00000445064 NPR3P17342 541 aa17.05■□□□□ 0.32
SEC13-213ENST00000445064 NAMPTP43490 491 aa17.05■□□□□ 0.32
SEC13-213ENST00000445064 MAPK6Q16659 721 aa17.05■□□□□ 0.32
SEC13-213ENST00000445064 RTP2Q5QGT7 225 aa17.05■□□□□ 0.32
SEC13-213ENST00000445064 TTC38Q5R3I4 469 aa17.05■□□□□ 0.32
SEC13-213ENST00000445064 EEF1DP3Q658K8 133 aa17.05■□□□□ 0.32
SEC13-213ENST00000445064 CWF19L1Q69YN2 538 aaKnown RBP17.05■□□□□ 0.32
SEC13-213ENST00000445064 CEP57Q86XR8 500 aa17.05■□□□□ 0.32
SEC13-213ENST00000445064 GPR65Q8IYL9 337 aa17.05■□□□□ 0.32
SEC13-213ENST00000445064 DEPTORQ8TB45 409 aa17.05■□□□□ 0.32
SEC13-213ENST00000445064 STAMQ92783 540 aa17.05■□□□□ 0.32
SEC13-213ENST00000445064 LLPHQ9BRT6 129 aaKnown RBP17.05■□□□□ 0.32
SEC13-213ENST00000445064 RHOBTB2Q9BYZ6 727 aa17.05■□□□□ 0.32
SEC13-213ENST00000445064 CCDC113Q9H0I3 377 aa17.05■□□□□ 0.32
SEC13-213ENST00000445064 FBXL21Q9UKT6 434 aa17.05■□□□□ 0.32
SEC13-213ENST00000445064 ZMYM2Q9UBW7 1377 aa17.04■□□□□ 0.32
SEC13-213ENST00000445064 PIEZO1Q92508 2521 aa17.04■□□□□ 0.32
SEC13-213ENST00000445064 SF3B1O75533 1304 aaKnown RBP eCLIP17.04■□□□□ 0.324e-7■■■■■ 86.2
SEC13-213ENST00000445064 ST18O60284 1047 aa17.04■□□□□ 0.32
SEC13-213ENST00000445064 RECQL4O94761 1208 aa17.04■□□□□ 0.32
SEC13-213ENST00000445064 C1RP00736 705 aa17.04■□□□□ 0.32
SEC13-213ENST00000445064 CFHP08603 1231 aa17.04■□□□□ 0.32
SEC13-213ENST00000445064 CCT6AP40227 531 aaKnown RBP17.04■□□□□ 0.32
SEC13-213ENST00000445064 NBR1Q14596 966 aa17.04■□□□□ 0.32
SEC13-213ENST00000445064 FAM171A1Q5VUB5 890 aa17.04■□□□□ 0.32
SEC13-213ENST00000445064 SIX5Q8N196 739 aa17.04■□□□□ 0.32
SEC13-213ENST00000445064 SLC44A3Q8N4M1 653 aa17.04■□□□□ 0.32
SEC13-213ENST00000445064 C4orf32Q8N8J7 132 aa17.04■□□□□ 0.32
SEC13-213ENST00000445064 FBXO18Q8NFZ0 1043 aa17.04■□□□□ 0.32
SEC13-213ENST00000445064 ADPGKQ9BRR6 497 aa17.04■□□□□ 0.32
SEC13-213ENST00000445064 KIFC3Q9BVG8 833 aa17.04■□□□□ 0.32
SEC13-213ENST00000445064 PRKD2Q9BZL6 878 aa17.04■□□□□ 0.32
SEC13-213ENST00000445064 ZDHHC7Q9NXF8 308 aa17.04■□□□□ 0.32
SEC13-213ENST00000445064 GDAQ9Y2T3 454 aa17.04■□□□□ 0.32
SEC13-213ENST00000445064 ZDBF2Q9HCK1 2354 aa17.04■□□□□ 0.32
SEC13-213ENST00000445064 ZMYND10O75800 440 aa17.03■□□□□ 0.32
SEC13-213ENST00000445064 KIF4AO95239 1232 aa17.03■□□□□ 0.32
SEC13-213ENST00000445064 RBM25P49756 843 aaKnown RBP17.03■□□□□ 0.32
SEC13-213ENST00000445064 CREMQ03060 361 aa17.03■□□□□ 0.32
SEC13-213ENST00000445064 ORC2Q13416 577 aaPredicted RBP17.03■□□□□ 0.32
SEC13-213ENST00000445064 GNL2Q13823 731 aaKnown RBP17.03■□□□□ 0.32
SEC13-213ENST00000445064 NAB2Q15742 525 aa17.03■□□□□ 0.32
SEC13-213ENST00000445064 ERICH6BQ5W0A0 696 aa17.03■□□□□ 0.32
SEC13-213ENST00000445064 ST13P5Q8NFI4 369 aaPredicted RBP17.03■□□□□ 0.32
SEC13-213ENST00000445064 LNX1Q8TBB1 728 aaPredicted RBP17.03■□□□□ 0.32
SEC13-213ENST00000445064 CLSTN3Q9BQT9 956 aa17.03■□□□□ 0.32
SEC13-213ENST00000445064 TTPALQ9BTX7 342 aa17.03■□□□□ 0.32
SEC13-213ENST00000445064 BHMT2Q9H2M3 363 aa17.03■□□□□ 0.32
SEC13-213ENST00000445064 EPS15L1Q9UBC2 864 aa17.03■□□□□ 0.32
SEC13-213ENST00000445064 KIAA1024Q9UPX6 916 aa17.03■□□□□ 0.32
SEC13-213ENST00000445064 MTCL1Q9Y4B5 1905 aaKnown RBP17.03■□□□□ 0.32
SEC13-213ENST00000445064 STK25O00506 426 aa17.02■□□□□ 0.32
SEC13-213ENST00000445064 PAPLNO95428 1278 aa17.02■□□□□ 0.32
SEC13-213ENST00000445064 LAMP2P13473 410 aa17.02■□□□□ 0.32
SEC13-213ENST00000445064 AOC1P19801 751 aa17.02■□□□□ 0.32
SEC13-213ENST00000445064 MUTP22033 750 aa17.02■□□□□ 0.32
SEC13-213ENST00000445064 IGFBP6P24592 240 aaPredicted RBP17.02■□□□□ 0.32
SEC13-213ENST00000445064 FXR2P51116 673 aaKnown RBP eCLIP17.02■□□□□ 0.32
SEC13-213ENST00000445064 PPP2R5AQ15172 486 aa17.02■□□□□ 0.32
SEC13-213ENST00000445064 NT5DC1Q5TFE4 455 aa17.02■□□□□ 0.32
SEC13-213ENST00000445064 HAUS3Q68CZ6 603 aa17.02■□□□□ 0.32
SEC13-213ENST00000445064 FAM184AQ8NB25 1140 aa17.02■□□□□ 0.32
SEC13-213ENST00000445064 IFT74Q96LB3 600 aa17.02■□□□□ 0.32
SEC13-213ENST00000445064 LRWD1Q9UFC0 647 aa17.02■□□□□ 0.32
SEC13-213ENST00000445064 KRBA1A5PL33 1030 aa17.01■□□□□ 0.31
SEC13-213ENST00000445064 K7ERI5 159 aa17.01■□□□□ 0.31
SEC13-213ENST00000445064 ADAM12O43184 909 aa17.01■□□□□ 0.31
SEC13-213ENST00000445064 HMGN5P82970 282 aaKnown RBP17.01■□□□□ 0.31
SEC13-213ENST00000445064 PSMD5Q16401 504 aa17.01■□□□□ 0.31
SEC13-213ENST00000445064 GET4Q7L5D6 327 aaPredicted RBP17.01■□□□□ 0.31
SEC13-213ENST00000445064 GRASPQ7Z6J2 395 aaPredicted RBP17.01■□□□□ 0.31
SEC13-213ENST00000445064 PIK3R5Q8WYR1 880 aa17.01■□□□□ 0.31
SEC13-213ENST00000445064 ZSCAN31Q96LW9 406 aaPredicted RBP17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms