RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 ANO10Q9NW15 660 aa18.82■□□□□ 0.6
LIME1-202ENST00000444951 PSMA7O14818 248 aa18.81■□□□□ 0.6
LIME1-202ENST00000444951 N4BP3O15049 544 aa18.81■□□□□ 0.6
LIME1-202ENST00000444951 CLIC2O15247 247 aa18.81■□□□□ 0.6
LIME1-202ENST00000444951 MGEA5O60502 916 aa18.81■□□□□ 0.6
LIME1-202ENST00000444951 NPTXRO95502 500 aa18.81■□□□□ 0.6
LIME1-202ENST00000444951 CCDC192P0DO97 292 aa18.81■□□□□ 0.6
LIME1-202ENST00000444951 PCBP1Q15365 356 aaKnown RBP eCLIP18.81■□□□□ 0.6
LIME1-202ENST00000444951 ZNF568Q3ZCX4 644 aa18.81■□□□□ 0.6
LIME1-202ENST00000444951 HS2ST1Q7LGA3 356 aa18.81■□□□□ 0.6
LIME1-202ENST00000444951 KHSRPQ92945 711 aaKnown RBP eCLIP18.81■□□□□ 0.6
LIME1-202ENST00000444951 ADAM2Q99965 735 aa18.81■□□□□ 0.6
LIME1-202ENST00000444951 DNAJC25Q9H1X3 360 aa18.81■□□□□ 0.6
LIME1-202ENST00000444951 PCIF1Q9H4Z3 704 aa18.81■□□□□ 0.6
LIME1-202ENST00000444951 UBE2ZQ9H832 354 aaPredicted RBP18.81■□□□□ 0.6
LIME1-202ENST00000444951 RALGAPA2Q2PPJ7 1873 aa18.8■□□□□ 0.6
LIME1-202ENST00000444951 TRIM49BA6NDI0 452 aa18.8■□□□□ 0.6
LIME1-202ENST00000444951 TGFB1I1O43294 461 aa18.8■□□□□ 0.6
LIME1-202ENST00000444951 LINC00271P0C7V0 271 aa18.8■□□□□ 0.6
LIME1-202ENST00000444951 AXLP30530 894 aa18.8■□□□□ 0.6
LIME1-202ENST00000444951 ANO6Q4KMQ2 910 aa18.8■□□□□ 0.6
LIME1-202ENST00000444951 MPZL3Q6UWV2 235 aa18.8■□□□□ 0.6
LIME1-202ENST00000444951 ZPBP2Q6X784 338 aa18.8■□□□□ 0.6
LIME1-202ENST00000444951 C11orf57Q6ZUT1 292 aaPredicted RBP18.8■□□□□ 0.6
LIME1-202ENST00000444951 POMGNT1Q8WZA1 660 aa18.8■□□□□ 0.6
LIME1-202ENST00000444951 APBB2Q92870 758 aa18.8■□□□□ 0.6
LIME1-202ENST00000444951 DHTKD1Q96HY7 919 aaPredicted RBP18.8■□□□□ 0.6
LIME1-202ENST00000444951 ADPGKQ9BRR6 497 aa18.8■□□□□ 0.6
LIME1-202ENST00000444951 EIF2AQ9BY44 585 aaKnown RBP18.8■□□□□ 0.6
LIME1-202ENST00000444951 KCTD10Q9H3F6 313 aa18.8■□□□□ 0.6
LIME1-202ENST00000444951 CD320Q9NPF0 282 aa18.8■□□□□ 0.6
LIME1-202ENST00000444951 DACH1Q9UI36 760 aa18.8■□□□□ 0.6
LIME1-202ENST00000444951 TNFSF13BQ9Y275 285 aa18.8■□□□□ 0.6
LIME1-202ENST00000444951 TTC3P53804 2025 aa18.79■□□□□ 0.6
LIME1-202ENST00000444951 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.79■□□□□ 0.6
LIME1-202ENST00000444951 A0A1B0GUA9 196 aa18.79■□□□□ 0.6
LIME1-202ENST00000444951 CLDN3O15551 220 aa18.79■□□□□ 0.6
LIME1-202ENST00000444951 TOM1L1O75674 476 aa18.79■□□□□ 0.6
LIME1-202ENST00000444951 PIGRP01833 764 aa18.79■□□□□ 0.6
LIME1-202ENST00000444951 PPP1R2P41236 205 aa18.79■□□□□ 0.6
LIME1-202ENST00000444951 CYP2J2P51589 502 aa18.79■□□□□ 0.6
LIME1-202ENST00000444951 PMS1P54277 932 aaKnown RBP18.79■□□□□ 0.6
LIME1-202ENST00000444951 PAK1Q13153 545 aa18.79■□□□□ 0.6
LIME1-202ENST00000444951 COBLL1Q53SF7 1204 aa18.79■□□□□ 0.6
LIME1-202ENST00000444951 ARMCX5Q6P1M9 558 aa18.79■□□□□ 0.6
LIME1-202ENST00000444951 SLC27A1Q6PCB7 646 aa18.79■□□□□ 0.6
LIME1-202ENST00000444951 TMEM192Q8IY95 271 aa18.79■□□□□ 0.6
LIME1-202ENST00000444951 RNF169Q8NCN4 708 aa18.79■□□□□ 0.6
LIME1-202ENST00000444951 LINC01599Q8WXQ3 324 aa18.79■□□□□ 0.6
LIME1-202ENST00000444951 KCNN1Q92952 543 aa18.79■□□□□ 0.6
LIME1-202ENST00000444951 P2RX5Q93086 422 aa18.79■□□□□ 0.6
LIME1-202ENST00000444951 MRPL38Q96DV4 380 aaKnown RBP18.79■□□□□ 0.6
LIME1-202ENST00000444951 TSG101Q99816 390 aa18.79■□□□□ 0.6
LIME1-202ENST00000444951 CBWD1Q9BRT8 395 aa18.79■□□□□ 0.6
LIME1-202ENST00000444951 MSTO1Q9BUK6 570 aa18.79■□□□□ 0.6
LIME1-202ENST00000444951 APOL6Q9BWW8 343 aa18.79■□□□□ 0.6
LIME1-202ENST00000444951 TRIM6Q9C030 488 aaPredicted RBP18.79■□□□□ 0.6
LIME1-202ENST00000444951 CHST12Q9NRB3 414 aa18.79■□□□□ 0.6
LIME1-202ENST00000444951 AGPAT3Q9NRZ7 376 aa18.79■□□□□ 0.6
LIME1-202ENST00000444951 TYW1Q9NV66 732 aaKnown RBP18.79■□□□□ 0.6
LIME1-202ENST00000444951 H3BNC9 293 aa18.78■□□□□ 0.6
LIME1-202ENST00000444951 PDXKO00764 312 aa18.78■□□□□ 0.6
LIME1-202ENST00000444951 CALUO43852 315 aaPredicted RBP18.78■□□□□ 0.6
LIME1-202ENST00000444951 CCNE1P24864 410 aa18.78■□□□□ 0.6
LIME1-202ENST00000444951 OSTNP61366 133 aa18.78■□□□□ 0.6
LIME1-202ENST00000444951 GPM6BQ13491 265 aa18.78■□□□□ 0.6
LIME1-202ENST00000444951 DSC3Q14574 896 aa18.78■□□□□ 0.6
LIME1-202ENST00000444951 NOLC1Q14978 699 aaKnown RBP eCLIP18.78■□□□□ 0.6
LIME1-202ENST00000444951 SEZ6Q53EL9 994 aa18.78■□□□□ 0.6
LIME1-202ENST00000444951 UBXN11Q5T124 520 aa18.78■□□□□ 0.6
LIME1-202ENST00000444951 ANKRD40Q6AI12 368 aa18.78■□□□□ 0.6
LIME1-202ENST00000444951 RTN4RL1Q86UN2 441 aaPredicted RBP18.78■□□□□ 0.6
LIME1-202ENST00000444951 THNSL1Q8IYQ7 743 aa18.78■□□□□ 0.6
LIME1-202ENST00000444951 SAAL1Q96ER3 474 aa18.78■□□□□ 0.6
LIME1-202ENST00000444951 FTHL17Q9BXU8 183 aa18.78■□□□□ 0.6
LIME1-202ENST00000444951 HAPLN2Q9GZV7 340 aa18.78■□□□□ 0.6
LIME1-202ENST00000444951 CDT1Q9H211 546 aa18.78■□□□□ 0.6
LIME1-202ENST00000444951 EPHX3Q9H6B9 360 aa18.78■□□□□ 0.6
LIME1-202ENST00000444951 RC3H2Q9HBD1 1191 aaKnown RBP18.78■□□□□ 0.6
LIME1-202ENST00000444951 GOLGA8IPA6NC78 632 aa18.77■□□□□ 0.6
LIME1-202ENST00000444951 GOLGA8JA6NMD2 632 aa18.77■□□□□ 0.6
LIME1-202ENST00000444951 ENPP3O14638 875 aa18.77■□□□□ 0.6
LIME1-202ENST00000444951 KCNA5P22460 613 aa18.77■□□□□ 0.6
LIME1-202ENST00000444951 ADSSP30520 456 aa18.77■□□□□ 0.6
LIME1-202ENST00000444951 SLFN12LQ6IEE8 588 aa18.77■□□□□ 0.6
LIME1-202ENST00000444951 CENPPQ6IPU0 288 aa18.77■□□□□ 0.6
LIME1-202ENST00000444951 APBB1IPQ7Z5R6 666 aaPredicted RBP18.77■□□□□ 0.6
LIME1-202ENST00000444951 ZSWIM2Q8NEG5 633 aa18.77■□□□□ 0.6
LIME1-202ENST00000444951 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.77■□□□□ 0.6
LIME1-202ENST00000444951 GOLGA5Q8TBA6 731 aa18.77■□□□□ 0.6
LIME1-202ENST00000444951 EEF2KMTQ96G04 330 aa18.77■□□□□ 0.6
LIME1-202ENST00000444951 SAMD11Q96NU1 681 aa18.77■□□□□ 0.6
LIME1-202ENST00000444951 FUCA2Q9BTY2 467 aa18.77■□□□□ 0.6
LIME1-202ENST00000444951 PTPRHQ9HD43 1115 aa18.77■□□□□ 0.6
LIME1-202ENST00000444951 HES2Q9Y543 173 aa18.77■□□□□ 0.6
LIME1-202ENST00000444951 A0A0B4J269 797 aa18.76■□□□□ 0.59
LIME1-202ENST00000444951 BICDL2A1A5D9 508 aa18.76■□□□□ 0.59
LIME1-202ENST00000444951 ABLIM1O14639 778 aa18.76■□□□□ 0.59
LIME1-202ENST00000444951 NR3C1P04150 777 aa18.76■□□□□ 0.59
LIME1-202ENST00000444951 PROZP22891 400 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms