RNA–Protein interactions for RNA: ENST00000444457.5

PMPCB-204, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 2

Gene PMPCB, Length 2,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-204ENST00000444457 TEKT3Q9BXF9 490 aa20.28■□□□□ 0.84
PMPCB-204ENST00000444457 PAPOLBQ9NRJ5 636 aaKnown RBP20.28■□□□□ 0.84
PMPCB-204ENST00000444457 DAAM1Q9Y4D1 1078 aa20.28■□□□□ 0.84
PMPCB-204ENST00000444457 DPPA5A6NC42 116 aa20.28■□□□□ 0.84
PMPCB-204ENST00000444457 FAM187AA6NFU0 413 aa20.28■□□□□ 0.84
PMPCB-204ENST00000444457 SMIM23A6NLE4 172 aa20.28■□□□□ 0.84
PMPCB-204ENST00000444457 DDX3XO00571 662 aaKnown RBP eCLIP20.28■□□□□ 0.842e-16■□□□□ 10.3
PMPCB-204ENST00000444457 FMO5P49326 533 aa20.28■□□□□ 0.84
PMPCB-204ENST00000444457 ROR2Q01974 943 aaKnown RBP20.28■□□□□ 0.84
PMPCB-204ENST00000444457 SPDYE2Q495Y8 402 aa20.28■□□□□ 0.84
PMPCB-204ENST00000444457 TAOK1Q7L7X3 1001 aa20.28■□□□□ 0.84
PMPCB-204ENST00000444457 HS2ST1Q7LGA3 356 aa20.28■□□□□ 0.84
PMPCB-204ENST00000444457 LDHDQ86WU2 507 aa20.28■□□□□ 0.84
PMPCB-204ENST00000444457 LXNQ9BS40 222 aa20.28■□□□□ 0.84
PMPCB-204ENST00000444457 FGFR1OP2Q9NVK5 253 aa20.28■□□□□ 0.84
PMPCB-204ENST00000444457 PNMA3Q9UL41 463 aa20.28■□□□□ 0.84
PMPCB-204ENST00000444457 ARL2BPQ9Y2Y0 163 aa20.28■□□□□ 0.84
PMPCB-204ENST00000444457 RAD17O75943 681 aa20.27■□□□□ 0.84
PMPCB-204ENST00000444457 GFPT2O94808 682 aa20.27■□□□□ 0.84
PMPCB-204ENST00000444457 STAT1P42224 750 aa20.27■□□□□ 0.84
PMPCB-204ENST00000444457 PDCD2Q16342 344 aaPredicted RBP20.27■□□□□ 0.84
PMPCB-204ENST00000444457 CCDC38Q502W7 563 aa20.27■□□□□ 0.84
PMPCB-204ENST00000444457 ODR4Q5SWX8 454 aa20.27■□□□□ 0.84
PMPCB-204ENST00000444457 ANO7Q6IWH7 933 aa20.27■□□□□ 0.84
PMPCB-204ENST00000444457 CDAN1Q8IWY9 1227 aa20.27■□□□□ 0.84
PMPCB-204ENST00000444457 FITM2Q8N6M3 262 aa20.27■□□□□ 0.84
PMPCB-204ENST00000444457 GMLQ99445 158 aa20.27■□□□□ 0.84
PMPCB-204ENST00000444457 AGPAT3Q9NRZ7 376 aa20.27■□□□□ 0.84
PMPCB-204ENST00000444457 FBXO28Q9NVF7 368 aa20.27■□□□□ 0.84
PMPCB-204ENST00000444457 DMAC2Q9NW81 257 aa20.27■□□□□ 0.84
PMPCB-204ENST00000444457 E7ENQ6 273 aa20.27■□□□□ 0.83
PMPCB-204ENST00000444457 RTN3O95197 1032 aaPredicted RBP20.27■□□□□ 0.83
PMPCB-204ENST00000444457 H2AFZP0C0S5 128 aa20.27■□□□□ 0.83
PMPCB-204ENST00000444457 MRPS35P82673 323 aaKnown RBP20.27■□□□□ 0.83
PMPCB-204ENST00000444457 H2AFVQ71UI9 128 aa20.27■□□□□ 0.83
PMPCB-204ENST00000444457 DEFB132Q7Z7B7 95 aa20.27■□□□□ 0.83
PMPCB-204ENST00000444457 EPS8L3Q8TE67 593 aaKnown RBP20.27■□□□□ 0.83
PMPCB-204ENST00000444457 PRKAG3Q9UGI9 489 aa20.27■□□□□ 0.83
PMPCB-204ENST00000444457 FEM1BQ9UK73 627 aa20.27■□□□□ 0.83
PMPCB-204ENST00000444457 INTUQ9ULD6 942 aa20.27■□□□□ 0.83
PMPCB-204ENST00000444457 DIS3Q9Y2L1 958 aaKnown RBP20.27■□□□□ 0.83
PMPCB-204ENST00000444457 IPO5O00410 1097 aaKnown RBP20.26■□□□□ 0.83
PMPCB-204ENST00000444457 NPTXRO95502 500 aa20.26■□□□□ 0.83
PMPCB-204ENST00000444457 CYP2J2P51589 502 aa20.26■□□□□ 0.83
PMPCB-204ENST00000444457 PLTPP55058 493 aa20.26■□□□□ 0.83
PMPCB-204ENST00000444457 SNX1Q13596 522 aa20.26■□□□□ 0.83
PMPCB-204ENST00000444457 DHX34Q14147 1143 aaKnown RBP20.26■□□□□ 0.83
PMPCB-204ENST00000444457 MFSD5Q6N075 450 aa20.26■□□□□ 0.83
PMPCB-204ENST00000444457 FBXO25Q8TCJ0 367 aa20.26■□□□□ 0.83
PMPCB-204ENST00000444457 KCNV2Q8TDN2 545 aa20.26■□□□□ 0.83
PMPCB-204ENST00000444457 TRIM33Q9UPN9 1127 aa20.26■□□□□ 0.83
PMPCB-204ENST00000444457 FRMD4BQ9Y2L6 1034 aa20.26■□□□□ 0.83
PMPCB-204ENST00000444457 TCP11X1B4DZS4 312 aa20.26■□□□□ 0.83
PMPCB-204ENST00000444457 KIAA0391O15091 583 aaKnown RBP20.26■□□□□ 0.83
PMPCB-204ENST00000444457 HIP1RO75146 1068 aa20.26■□□□□ 0.83
PMPCB-204ENST00000444457 SOX5P35711 763 aa20.26■□□□□ 0.83
PMPCB-204ENST00000444457 SSR1P43307 286 aaKnown RBP20.26■□□□□ 0.83
PMPCB-204ENST00000444457 GCLCP48506 637 aaPredicted RBP20.26■□□□□ 0.83
PMPCB-204ENST00000444457 AUHQ13825 339 aaKnown RBP20.26■□□□□ 0.83
PMPCB-204ENST00000444457 OLIG1Q8TAK6 271 aa20.26■□□□□ 0.83
PMPCB-204ENST00000444457 GLIS2Q9BZE0 524 aaPredicted RBP20.26■□□□□ 0.83
PMPCB-204ENST00000444457 TMEM39BQ9GZU3 492 aa20.26■□□□□ 0.83
PMPCB-204ENST00000444457 AMFRQ9UKV5 643 aa20.26■□□□□ 0.83
PMPCB-204ENST00000444457 ARHGEF35A5YM69 484 aa20.25■□□□□ 0.83
PMPCB-204ENST00000444457 TBC1D12O60347 775 aa20.25■□□□□ 0.83
PMPCB-204ENST00000444457 GNAT1P11488 350 aa20.25■□□□□ 0.83
PMPCB-204ENST00000444457 GBP1P32455 592 aa20.25■□□□□ 0.83
PMPCB-204ENST00000444457 SGSM1Q2NKQ1 1148 aa20.25■□□□□ 0.83
PMPCB-204ENST00000444457 CBWD6Q4V339 395 aa20.25■□□□□ 0.83
PMPCB-204ENST00000444457 CBWD3Q5JTY5 395 aa20.25■□□□□ 0.83
PMPCB-204ENST00000444457 CBWD5Q5RIA9 395 aa20.25■□□□□ 0.83
PMPCB-204ENST00000444457 MIGA2Q7L4E1 593 aa20.25■□□□□ 0.83
PMPCB-204ENST00000444457 SPATA21Q7Z572 469 aa20.25■□□□□ 0.83
PMPCB-204ENST00000444457 OGFOD1Q8N543 542 aa20.25■□□□□ 0.83
PMPCB-204ENST00000444457 LNX1Q8TBB1 728 aaPredicted RBP20.25■□□□□ 0.83
PMPCB-204ENST00000444457 U2AF1L4Q8WU68 220 aaKnown RBP20.25■□□□□ 0.83
PMPCB-204ENST00000444457 ZFAND2BQ8WV99 257 aa20.25■□□□□ 0.83
PMPCB-204ENST00000444457 RAB3IPQ96QF0 476 aaPredicted RBP20.25■□□□□ 0.83
PMPCB-204ENST00000444457 MXRA8Q9BRK3 442 aa20.25■□□□□ 0.83
PMPCB-204ENST00000444457 STK33Q9BYT3 514 aa20.25■□□□□ 0.83
PMPCB-204ENST00000444457 SEMA4AQ9H3S1 761 aa20.25■□□□□ 0.83
PMPCB-204ENST00000444457 ASB3Q9Y575 518 aa20.25■□□□□ 0.83
PMPCB-204ENST00000444457 RGPD3A6NKT7 1758 aaPredicted RBP20.25■□□□□ 0.83
PMPCB-204ENST00000444457 RGPD4Q7Z3J3 1758 aa20.25■□□□□ 0.83
PMPCB-204ENST00000444457 LRRD1A4D1F6 860 aa20.24■□□□□ 0.83
PMPCB-204ENST00000444457 CAP2P40123 477 aa20.24■□□□□ 0.83
PMPCB-204ENST00000444457 LBRQ14739 615 aaKnown RBP20.24■□□□□ 0.83
PMPCB-204ENST00000444457 UBAP2Q5T6F2 1119 aaKnown RBP20.24■□□□□ 0.83
PMPCB-204ENST00000444457 DCAF12L1Q5VU92 463 aa20.24■□□□□ 0.83
PMPCB-204ENST00000444457 JAMLQ86YT9 394 aa20.24■□□□□ 0.83
PMPCB-204ENST00000444457 GALNT15Q8N3T1 639 aa20.24■□□□□ 0.83
PMPCB-204ENST00000444457 RIT2Q99578 217 aa20.24■□□□□ 0.83
PMPCB-204ENST00000444457 TRIM7Q9C029 511 aa20.24■□□□□ 0.83
PMPCB-204ENST00000444457 DEFB129Q9H1M3 183 aa20.24■□□□□ 0.83
PMPCB-204ENST00000444457 GRHL1Q9NZI5 618 aa20.24■□□□□ 0.83
PMPCB-204ENST00000444457 DNAJC12Q9UKB3 198 aa20.24■□□□□ 0.83
PMPCB-204ENST00000444457 ZBTB12Q9Y330 459 aaPredicted RBP20.24■□□□□ 0.83
PMPCB-204ENST00000444457 COL4A5P29400 1685 aa20.24■□□□□ 0.83
PMPCB-204ENST00000444457 DDX3YO15523 660 aaKnown RBP20.24■□□□□ 0.83
PMPCB-204ENST00000444457 SMIM24O75264 130 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms