RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 GDAQ9Y2T3 454 aa11.98□□□□□ -0.49
SF3A1-203ENST00000444440 CLIC4Q9Y696 253 aa11.98□□□□□ -0.49
SF3A1-203ENST00000444440 SCN1AP35498 2009 aa11.98□□□□□ -0.49
SF3A1-203ENST00000444440 FSD2A1L4K1 749 aa11.97□□□□□ -0.49
SF3A1-203ENST00000444440 SLC16A4O15374 487 aa11.97□□□□□ -0.49
SF3A1-203ENST00000444440 KIF4AO95239 1232 aa11.97□□□□□ -0.49
SF3A1-203ENST00000444440 MYBP10242 640 aa11.97□□□□□ -0.49
SF3A1-203ENST00000444440 GUCY2CP25092 1073 aa11.97□□□□□ -0.49
SF3A1-203ENST00000444440 RESTQ13127 1097 aa11.97□□□□□ -0.49
SF3A1-203ENST00000444440 PTPAQ15257 358 aa11.97□□□□□ -0.49
SF3A1-203ENST00000444440 SF3A1Q15459 793 aaKnown RBP11.97□□□□□ -0.49
SF3A1-203ENST00000444440 HERC4Q5GLZ8 1057 aaPredicted RBP11.97□□□□□ -0.49
SF3A1-203ENST00000444440 GLRA4Q5JXX5 417 aa11.97□□□□□ -0.49
SF3A1-203ENST00000444440 ATF7IP2Q5U623 682 aa11.97□□□□□ -0.49
SF3A1-203ENST00000444440 USP49Q70CQ1 688 aa11.97□□□□□ -0.49
SF3A1-203ENST00000444440 CABP7Q86V35 215 aa11.97□□□□□ -0.49
SF3A1-203ENST00000444440 SYT2Q8N9I0 419 aaPredicted RBP11.97□□□□□ -0.49
SF3A1-203ENST00000444440 ZBTB45Q96K62 511 aaPredicted RBP11.97□□□□□ -0.49
SF3A1-203ENST00000444440 POP1Q99575 1024 aaKnown RBP11.97□□□□□ -0.49
SF3A1-203ENST00000444440 ACO2Q99798 780 aaKnown RBP11.97□□□□□ -0.49
SF3A1-203ENST00000444440 TARS2Q9BW92 718 aaKnown RBP11.97□□□□□ -0.49
SF3A1-203ENST00000444440 CDT1Q9H211 546 aa11.97□□□□□ -0.49
SF3A1-203ENST00000444440 CHST7Q9NS84 486 aa11.97□□□□□ -0.49
SF3A1-203ENST00000444440 STK24Q9Y6E0 443 aa11.97□□□□□ -0.49
SF3A1-203ENST00000444440 CARNS1A5YM72 827 aa11.96□□□□□ -0.49
SF3A1-203ENST00000444440 K7ERI5 159 aa11.96□□□□□ -0.49
SF3A1-203ENST00000444440 TEX28O15482 410 aa11.96□□□□□ -0.49
SF3A1-203ENST00000444440 PLA2G4BP0C869 781 aa11.96□□□□□ -0.49
SF3A1-203ENST00000444440 HOXB8P17481 243 aaPredicted RBP11.96□□□□□ -0.49
SF3A1-203ENST00000444440 SYT1P21579 422 aa11.96□□□□□ -0.49
SF3A1-203ENST00000444440 PROZP22891 400 aa11.96□□□□□ -0.49
SF3A1-203ENST00000444440 GLUD2P49448 558 aa11.96□□□□□ -0.49
SF3A1-203ENST00000444440 EFNA5P52803 228 aa11.96□□□□□ -0.49
SF3A1-203ENST00000444440 DSG1Q02413 1049 aa11.96□□□□□ -0.49
SF3A1-203ENST00000444440 SOX4Q06945 474 aaPredicted RBP11.96□□□□□ -0.49
SF3A1-203ENST00000444440 TUSC3Q13454 348 aa11.96□□□□□ -0.49
SF3A1-203ENST00000444440 KARSQ15046 597 aaKnown RBP11.96□□□□□ -0.49
SF3A1-203ENST00000444440 TMEM132AQ24JP5 1023 aa11.96□□□□□ -0.49
SF3A1-203ENST00000444440 SPECC1Q5M775 1068 aa11.96□□□□□ -0.49
SF3A1-203ENST00000444440 RTP2Q5QGT7 225 aa11.96□□□□□ -0.49
SF3A1-203ENST00000444440 FUT10Q6P4F1 479 aa11.96□□□□□ -0.49
SF3A1-203ENST00000444440 CD300LGQ6UXG3 332 aa11.96□□□□□ -0.49
SF3A1-203ENST00000444440 TMC5Q6UXY8 1006 aa11.96□□□□□ -0.49
SF3A1-203ENST00000444440 BRAPQ7Z569 592 aa11.96□□□□□ -0.49
SF3A1-203ENST00000444440 ZBTB33Q86T24 672 aa11.96□□□□□ -0.49
SF3A1-203ENST00000444440 HACE1Q8IYU2 909 aa11.96□□□□□ -0.49
SF3A1-203ENST00000444440 RPS6KC1Q96S38 1066 aa11.96□□□□□ -0.49
SF3A1-203ENST00000444440 HAPLN2Q9GZV7 340 aa11.96□□□□□ -0.49
SF3A1-203ENST00000444440 ADAM7Q9H2U9 754 aa11.96□□□□□ -0.49
SF3A1-203ENST00000444440 TMEM134Q9H6X4 195 aa11.96□□□□□ -0.49
SF3A1-203ENST00000444440 GOLGA2P5Q9HBQ8 144 aa11.96□□□□□ -0.49
SF3A1-203ENST00000444440 RXFP1Q9HBX9 757 aa11.96□□□□□ -0.49
SF3A1-203ENST00000444440 KMT5AQ9NQR1 393 aa11.96□□□□□ -0.49
SF3A1-203ENST00000444440 MRPL17Q9NRX2 175 aaKnown RBP11.96□□□□□ -0.49
SF3A1-203ENST00000444440 ADAM28Q9UKQ2 775 aa11.96□□□□□ -0.49
SF3A1-203ENST00000444440 C2CD4DB7Z1M9 353 aa11.95□□□□□ -0.5
SF3A1-203ENST00000444440 URODP06132 367 aa11.95□□□□□ -0.5
SF3A1-203ENST00000444440 SRGAP2BP0DMP2 458 aa11.95□□□□□ -0.5
SF3A1-203ENST00000444440 RPL17P18621 184 aaKnown RBP11.95□□□□□ -0.5
SF3A1-203ENST00000444440 PLCG1P19174 1290 aa11.95□□□□□ -0.5
SF3A1-203ENST00000444440 KLRC2P26717 231 aa11.95□□□□□ -0.5
SF3A1-203ENST00000444440 OSTNP61366 133 aa11.95□□□□□ -0.5
SF3A1-203ENST00000444440 DMP1Q13316 513 aaPredicted RBP11.95□□□□□ -0.5
SF3A1-203ENST00000444440 GIT2Q14161 759 aa11.95□□□□□ -0.5
SF3A1-203ENST00000444440 DHX8Q14562 1220 aaKnown RBP11.95□□□□□ -0.5
SF3A1-203ENST00000444440 MCM6Q14566 821 aa11.95□□□□□ -0.5
SF3A1-203ENST00000444440 HSP90AA2PQ14568 343 aaPredicted RBP11.95□□□□□ -0.5
SF3A1-203ENST00000444440 DCAF4L1Q3SXM0 396 aa11.95□□□□□ -0.5
SF3A1-203ENST00000444440 TPRNQ4KMQ1 711 aa11.95□□□□□ -0.5
SF3A1-203ENST00000444440 SEZ6Q53EL9 994 aa11.95□□□□□ -0.5
SF3A1-203ENST00000444440 PRSS55Q6UWB4 352 aaPredicted RBP11.95□□□□□ -0.5
SF3A1-203ENST00000444440 GLYCTKQ8IVS8 523 aa11.95□□□□□ -0.5
SF3A1-203ENST00000444440 C3orf58Q8NDZ4 430 aa11.95□□□□□ -0.5
SF3A1-203ENST00000444440 TMEM161BQ8NDZ6 487 aa11.95□□□□□ -0.5
SF3A1-203ENST00000444440 EPSTI1Q96J88 318 aa11.95□□□□□ -0.5
SF3A1-203ENST00000444440 DRC1Q96MC2 740 aa11.95□□□□□ -0.5
SF3A1-203ENST00000444440 FBXL18Q96ME1 805 aa11.95□□□□□ -0.5
SF3A1-203ENST00000444440 ZMAT2Q96NC0 199 aaKnown RBP11.95□□□□□ -0.5
SF3A1-203ENST00000444440 PPP1R10Q96QC0 940 aaKnown RBP11.95□□□□□ -0.5
SF3A1-203ENST00000444440 REEP2Q9BRK0 252 aa11.95□□□□□ -0.5
SF3A1-203ENST00000444440 ADPGKQ9BRR6 497 aa11.95□□□□□ -0.5
SF3A1-203ENST00000444440 NT5C3AQ9H0P0 336 aa11.95□□□□□ -0.5
SF3A1-203ENST00000444440 SMOC2Q9H3U7 446 aa11.95□□□□□ -0.5
SF3A1-203ENST00000444440 MTMR6Q9Y217 621 aa11.95□□□□□ -0.5
SF3A1-203ENST00000444440 TNFSF13BQ9Y275 285 aa11.95□□□□□ -0.5
SF3A1-203ENST00000444440 MYO15AQ9UKN7 3530 aa11.95□□□□□ -0.5
SF3A1-203ENST00000444440 PRR33A8MZF0 331 aa11.94□□□□□ -0.5
SF3A1-203ENST00000444440 ADAM12O43184 909 aa11.94□□□□□ -0.5
SF3A1-203ENST00000444440 THP07101 528 aa11.94□□□□□ -0.5
SF3A1-203ENST00000444440 SPATA31D3P0C874 917 aa11.94□□□□□ -0.5
SF3A1-203ENST00000444440 MAPTP10636 758 aaKnown RBP11.94□□□□□ -0.5
SF3A1-203ENST00000444440 ALADP13716 330 aa11.94□□□□□ -0.5
SF3A1-203ENST00000444440 PLS3P13797 630 aa11.94□□□□□ -0.5
SF3A1-203ENST00000444440 MARCKSP29966 332 aaPredicted RBP11.94□□□□□ -0.5
SF3A1-203ENST00000444440 GRM5P41594 1212 aa11.94□□□□□ -0.5
SF3A1-203ENST00000444440 ITIH3Q06033 890 aa11.94□□□□□ -0.5
SF3A1-203ENST00000444440 BMS1Q14692 1282 aaKnown RBP11.94□□□□□ -0.5
SF3A1-203ENST00000444440 ZNF568Q3ZCX4 644 aa11.94□□□□□ -0.5
SF3A1-203ENST00000444440 KIAA1841Q6NSI8 718 aa11.94□□□□□ -0.5
SF3A1-203ENST00000444440 ALKAL1Q6UXT8 129 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms