RNA–Protein interactions for RNA: ENST00000443561.3

PDLIM2-212, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-212ENST00000443561 POMCP01189 267 aa14.08□□□□□ -0.16
PDLIM2-212ENST00000443561 IRS1P35568 1242 aa14.08□□□□□ -0.16
PDLIM2-212ENST00000443561 BCAR1P56945 870 aa14.08□□□□□ -0.16
PDLIM2-212ENST00000443561 SOX4Q06945 474 aaPredicted RBP14.08□□□□□ -0.16
PDLIM2-212ENST00000443561 DPYDQ12882 1025 aa14.08□□□□□ -0.16
PDLIM2-212ENST00000443561 GPM6BQ13491 265 aa14.08□□□□□ -0.16
PDLIM2-212ENST00000443561 DCAF4L1Q3SXM0 396 aa14.08□□□□□ -0.16
PDLIM2-212ENST00000443561 HERC4Q5GLZ8 1057 aaPredicted RBP14.08□□□□□ -0.16
PDLIM2-212ENST00000443561 L1TD1Q5T7N2 865 aaKnown RBP14.08□□□□□ -0.16
PDLIM2-212ENST00000443561 KCNT2Q6UVM3 1135 aa14.08□□□□□ -0.16
PDLIM2-212ENST00000443561 GLB1LQ6UWU2 654 aa14.08□□□□□ -0.16
PDLIM2-212ENST00000443561 ALKAL1Q6UXT8 129 aa14.08□□□□□ -0.16
PDLIM2-212ENST00000443561 CLEC17AQ6ZS10 378 aa14.08□□□□□ -0.16
PDLIM2-212ENST00000443561 COLGALT2Q8IYK4 626 aa14.08□□□□□ -0.16
PDLIM2-212ENST00000443561 CNNM3Q8NE01 707 aa14.08□□□□□ -0.16
PDLIM2-212ENST00000443561 P2RX5Q93086 422 aa14.08□□□□□ -0.16
PDLIM2-212ENST00000443561 PGBD4Q96DM1 585 aa14.08□□□□□ -0.16
PDLIM2-212ENST00000443561 SNX27Q96L92 541 aa14.08□□□□□ -0.16
PDLIM2-212ENST00000443561 PAAF1Q9BRP4 392 aa14.08□□□□□ -0.16
PDLIM2-212ENST00000443561 ANKFY1Q9P2R3 1169 aa14.08□□□□□ -0.16
PDLIM2-212ENST00000443561 GDAQ9Y2T3 454 aa14.08□□□□□ -0.16
PDLIM2-212ENST00000443561 GIT1Q9Y2X7 761 aa14.08□□□□□ -0.16
PDLIM2-212ENST00000443561 TSC2P49815 1807 aa14.08□□□□□ -0.16
PDLIM2-212ENST00000443561 PLXNA3P51805 1871 aa14.08□□□□□ -0.16
PDLIM2-212ENST00000443561 SPTBN5Q9NRC6 3674 aaKnown RBP14.08□□□□□ -0.16
PDLIM2-212ENST00000443561 A0A0B4J269 797 aa14.07□□□□□ -0.16
PDLIM2-212ENST00000443561 GALTP07902 379 aa14.07□□□□□ -0.16
PDLIM2-212ENST00000443561 MCF2P10911 925 aa14.07□□□□□ -0.16
PDLIM2-212ENST00000443561 HARSP12081 509 aaKnown RBP14.07□□□□□ -0.16
PDLIM2-212ENST00000443561 FOSL2P15408 326 aa14.07□□□□□ -0.16
PDLIM2-212ENST00000443561 NOLC1Q14978 699 aaKnown RBP eCLIP14.07□□□□□ -0.16
PDLIM2-212ENST00000443561 SLC10A6Q3KNW5 377 aa14.07□□□□□ -0.16
PDLIM2-212ENST00000443561 KMT5BQ4FZB7 885 aa14.07□□□□□ -0.16
PDLIM2-212ENST00000443561 CD300LGQ6UXG3 332 aa14.07□□□□□ -0.16
PDLIM2-212ENST00000443561 CRELD2Q6UXH1 353 aaPredicted RBP14.07□□□□□ -0.16
PDLIM2-212ENST00000443561 HVCN1Q96D96 273 aa14.07□□□□□ -0.16
PDLIM2-212ENST00000443561 PPP1R10Q96QC0 940 aaKnown RBP14.07□□□□□ -0.16
PDLIM2-212ENST00000443561 MRPL44Q9H9J2 332 aaKnown RBP14.07□□□□□ -0.16
PDLIM2-212ENST00000443561 PRDM6Q9NQX0 595 aa14.07□□□□□ -0.16
PDLIM2-212ENST00000443561 PARP2Q9UGN5 583 aa14.07□□□□□ -0.16
PDLIM2-212ENST00000443561 GTPBP6O43824 516 aaPredicted RBP14.06□□□□□ -0.16
PDLIM2-212ENST00000443561 ZC3H11AO75152 810 aaKnown RBP eCLIP14.06□□□□□ -0.16
PDLIM2-212ENST00000443561 FGF18O76093 207 aa14.06□□□□□ -0.16
PDLIM2-212ENST00000443561 GCNT3O95395 438 aa14.06□□□□□ -0.16
PDLIM2-212ENST00000443561 RB1P06400 928 aa14.06□□□□□ -0.16
PDLIM2-212ENST00000443561 LAG3P18627 525 aa14.06□□□□□ -0.16
PDLIM2-212ENST00000443561 OSTNP61366 133 aa14.06□□□□□ -0.16
PDLIM2-212ENST00000443561 STRN3Q13033 797 aa14.06□□□□□ -0.16
PDLIM2-212ENST00000443561 STK4Q13043 487 aa14.06□□□□□ -0.16
PDLIM2-212ENST00000443561 GLRA4Q5JXX5 417 aa14.06□□□□□ -0.16
PDLIM2-212ENST00000443561 FAM26FQ5R3K3 315 aa14.06□□□□□ -0.16
PDLIM2-212ENST00000443561 ADGRD2Q7Z7M1 963 aa14.06□□□□□ -0.16
PDLIM2-212ENST00000443561 CCDC65Q8IXS2 484 aa14.06□□□□□ -0.16
PDLIM2-212ENST00000443561 THNSL1Q8IYQ7 743 aa14.06□□□□□ -0.16
PDLIM2-212ENST00000443561 RNF168Q8IYW5 571 aaPredicted RBP14.06□□□□□ -0.16
PDLIM2-212ENST00000443561 ABI1Q8IZP0 508 aa14.06□□□□□ -0.16
PDLIM2-212ENST00000443561 SCFD1Q8WVM8 642 aa14.06□□□□□ -0.16
PDLIM2-212ENST00000443561 RABGGTAQ92696 567 aa14.06□□□□□ -0.16
PDLIM2-212ENST00000443561 ERCC4Q92889 916 aaPredicted RBP14.06□□□□□ -0.16
PDLIM2-212ENST00000443561 ADPGKQ9BRR6 497 aa14.06□□□□□ -0.16
PDLIM2-212ENST00000443561 PLVAPQ9BX97 442 aa14.06□□□□□ -0.16
PDLIM2-212ENST00000443561 MRPL9Q9BYD2 267 aaKnown RBP14.06□□□□□ -0.16
PDLIM2-212ENST00000443561 TRIM6Q9C030 488 aaPredicted RBP14.06□□□□□ -0.16
PDLIM2-212ENST00000443561 GBP3Q9H0R5 595 aa14.06□□□□□ -0.16
PDLIM2-212ENST00000443561 USP25Q9UHP3 1055 aa14.06□□□□□ -0.16
PDLIM2-212ENST00000443561 SCN1AP35498 2009 aa14.06□□□□□ -0.16
PDLIM2-212ENST00000443561 PVALEFA0A1B0GWK0 134 aa14.05□□□□□ -0.16
PDLIM2-212ENST00000443561 H0YCG3 227 aa14.05□□□□□ -0.16
PDLIM2-212ENST00000443561 FSCN2O14926 492 aa14.05□□□□□ -0.16
PDLIM2-212ENST00000443561 HNRNPDLO14979 420 aaKnown RBP14.05□□□□□ -0.16
PDLIM2-212ENST00000443561 TGFB1I1O43294 461 aa14.05□□□□□ -0.16
PDLIM2-212ENST00000443561 CSPG5O95196 566 aa14.05□□□□□ -0.16
PDLIM2-212ENST00000443561 ADRB2P07550 413 aa14.05□□□□□ -0.16
PDLIM2-212ENST00000443561 CXCL8P10145 99 aa14.05□□□□□ -0.16
PDLIM2-212ENST00000443561 LIG4P49917 911 aa14.05□□□□□ -0.16
PDLIM2-212ENST00000443561 ERVFC1P60507 584 aa14.05□□□□□ -0.16
PDLIM2-212ENST00000443561 FAM160A1Q05DH4 1040 aa14.05□□□□□ -0.16
PDLIM2-212ENST00000443561 NCBP1Q09161 790 aaKnown RBP14.05□□□□□ -0.16
PDLIM2-212ENST00000443561 ENOX2Q16206 610 aaKnown RBP14.05□□□□□ -0.16
PDLIM2-212ENST00000443561 BMT2Q1RMZ1 405 aa14.05□□□□□ -0.16
PDLIM2-212ENST00000443561 TMEM132AQ24JP5 1023 aa14.05□□□□□ -0.16
PDLIM2-212ENST00000443561 SCARA3Q6AZY7 606 aa14.05□□□□□ -0.16
PDLIM2-212ENST00000443561 CEP57L1Q8IYX8 460 aa14.05□□□□□ -0.16
PDLIM2-212ENST00000443561 ZNF507Q8TCN5 953 aa14.05□□□□□ -0.16
PDLIM2-212ENST00000443561 POF1BQ8WVV4 589 aa14.05□□□□□ -0.16
PDLIM2-212ENST00000443561 FAM84AQ96KN4 292 aa14.05□□□□□ -0.16
PDLIM2-212ENST00000443561 ZNF558Q96NG5 402 aa14.05□□□□□ -0.16
PDLIM2-212ENST00000443561 PYM1Q9BRP8 204 aaKnown RBP14.05□□□□□ -0.16
PDLIM2-212ENST00000443561 CBWD1Q9BRT8 395 aa14.05□□□□□ -0.16
PDLIM2-212ENST00000443561 GOLGA2P5Q9HBQ8 144 aa14.05□□□□□ -0.16
PDLIM2-212ENST00000443561 SLC39A2Q9NP94 309 aa14.05□□□□□ -0.16
PDLIM2-212ENST00000443561 RNF216Q9NWF9 866 aaPredicted RBP14.05□□□□□ -0.16
PDLIM2-212ENST00000443561 CNTN3Q9P232 1028 aa14.05□□□□□ -0.16
PDLIM2-212ENST00000443561 CPSF3Q9UKF6 684 aaKnown RBP14.05□□□□□ -0.16
PDLIM2-212ENST00000443561 RWDD3Q9Y3V2 267 aa14.05□□□□□ -0.16
PDLIM2-212ENST00000443561 TTC26A0AVF1 554 aa14.04□□□□□ -0.16
PDLIM2-212ENST00000443561 NRP1O14786 923 aa14.04□□□□□ -0.16
PDLIM2-212ENST00000443561 EIF3DO15371 548 aaKnown RBP eCLIP14.04□□□□□ -0.16
PDLIM2-212ENST00000443561 IGFBP4P22692 258 aa14.04□□□□□ -0.16
PDLIM2-212ENST00000443561 AMPD3Q01432 767 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms