RNA–Protein interactions for RNA: ENST00000443438.5

RER1-205, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 2

Gene RER1, Length 540 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-205ENST00000443438 HTRA3P83110 453 aa9.27□□□□□ -0.93
RER1-205ENST00000443438 RBM10P98175 930 aaKnown RBP9.27□□□□□ -0.93
RER1-205ENST00000443438 MBTD1Q05BQ5 628 aa9.27□□□□□ -0.93
RER1-205ENST00000443438 POU5F1BQ06416 359 aa9.27□□□□□ -0.93
RER1-205ENST00000443438 MCL1Q07820 350 aa9.27□□□□□ -0.93
RER1-205ENST00000443438 TAF1CQ15572 869 aaPredicted RBP9.27□□□□□ -0.93
RER1-205ENST00000443438 ELF2Q15723 593 aa9.27□□□□□ -0.93
RER1-205ENST00000443438 AMHR2Q16671 573 aa9.27□□□□□ -0.93
RER1-205ENST00000443438 ZACNQ401N2 412 aa9.27□□□□□ -0.93
RER1-205ENST00000443438 PRAMEF19Q5SWL8 479 aa9.27□□□□□ -0.93
RER1-205ENST00000443438 MARCH8Q5T0T0 291 aa9.27□□□□□ -0.93
RER1-205ENST00000443438 SCARA3Q6AZY7 606 aa9.27□□□□□ -0.93
RER1-205ENST00000443438 ALKBH5Q6P6C2 394 aaKnown RBP9.27□□□□□ -0.93
RER1-205ENST00000443438 TSHZ1Q6ZSZ6 1077 aa9.27□□□□□ -0.93
RER1-205ENST00000443438 SRGAP1Q7Z6B7 1085 aa9.27□□□□□ -0.93
RER1-205ENST00000443438 DNAAF5Q86Y56 855 aa9.27□□□□□ -0.93
RER1-205ENST00000443438 TXLNBQ8N3L3 684 aa9.27□□□□□ -0.93
RER1-205ENST00000443438 RNF149Q8NC42 400 aa9.27□□□□□ -0.93
RER1-205ENST00000443438 FBXL13Q8NEE6 735 aa9.27□□□□□ -0.93
RER1-205ENST00000443438 TRIM58Q8NG06 486 aa9.27□□□□□ -0.93
RER1-205ENST00000443438 SHC3Q92529 594 aa9.27□□□□□ -0.93
RER1-205ENST00000443438 TATDN2Q93075 761 aa9.27□□□□□ -0.93
RER1-205ENST00000443438 AGPAT1Q99943 283 aa9.27□□□□□ -0.93
RER1-205ENST00000443438 MSTO1Q9BUK6 570 aa9.27□□□□□ -0.93
RER1-205ENST00000443438 MRPL4Q9BYD3 311 aaKnown RBP9.27□□□□□ -0.93
RER1-205ENST00000443438 NFKBIZQ9BYH8 718 aa9.27□□□□□ -0.93
RER1-205ENST00000443438 C2orf40Q9H1Z8 148 aa9.27□□□□□ -0.93
RER1-205ENST00000443438 MINDY3Q9H8M7 445 aa9.27□□□□□ -0.93
RER1-205ENST00000443438 PDE11AQ9HCR9 933 aa9.27□□□□□ -0.93
RER1-205ENST00000443438 NOCTQ9UK39 431 aaKnown RBP9.27□□□□□ -0.93
RER1-205ENST00000443438 INTUQ9ULD6 942 aa9.27□□□□□ -0.93
RER1-205ENST00000443438 JRKLQ9Y4A0 524 aa9.27□□□□□ -0.93
RER1-205ENST00000443438 TLL2Q9Y6L7 1015 aa9.27□□□□□ -0.93
RER1-205ENST00000443438 A6NJR5 290 aa9.26□□□□□ -0.93
RER1-205ENST00000443438 MAGEB2O15479 319 aa9.26□□□□□ -0.93
RER1-205ENST00000443438 ZC3H11AO75152 810 aaKnown RBP eCLIP9.26□□□□□ -0.93
RER1-205ENST00000443438 TOM1L1O75674 476 aa9.26□□□□□ -0.93
RER1-205ENST00000443438 TOMM70O94826 608 aa9.26□□□□□ -0.93
RER1-205ENST00000443438 IQCF3P0C7M6 154 aa9.26□□□□□ -0.93
RER1-205ENST00000443438 DLATP10515 647 aaKnown RBP9.26□□□□□ -0.93
RER1-205ENST00000443438 PRLRP16471 622 aa9.26□□□□□ -0.93
RER1-205ENST00000443438 CTGFP29279 349 aa9.26□□□□□ -0.93
RER1-205ENST00000443438 INHBEP58166 350 aa9.26□□□□□ -0.93
RER1-205ENST00000443438 GRM1Q13255 1194 aa9.26□□□□□ -0.93
RER1-205ENST00000443438 TFDP1Q14186 410 aa9.26□□□□□ -0.93
RER1-205ENST00000443438 FAM187BQ17R55 369 aa9.26□□□□□ -0.93
RER1-205ENST00000443438 KIAA0753Q2KHM9 967 aa9.26□□□□□ -0.93
RER1-205ENST00000443438 TDRD10Q5VZ19 366 aaKnown RBP9.26□□□□□ -0.93
RER1-205ENST00000443438 EEF1DP3Q658K8 133 aa9.26□□□□□ -0.93
RER1-205ENST00000443438 LMBRD2Q68DH5 695 aaPredicted RBP9.26□□□□□ -0.93
RER1-205ENST00000443438 MTHFD1LQ6UB35 978 aa9.26□□□□□ -0.93
RER1-205ENST00000443438 USP37Q86T82 979 aa9.26□□□□□ -0.93
RER1-205ENST00000443438 PALB2Q86YC2 1186 aa9.26□□□□□ -0.93
RER1-205ENST00000443438 RHPN2Q8IUC4 686 aa9.26□□□□□ -0.93
RER1-205ENST00000443438 FMNL3Q8IVF7 1028 aa9.26□□□□□ -0.93
RER1-205ENST00000443438 BRSK2Q8IWQ3 736 aa9.26□□□□□ -0.93
RER1-205ENST00000443438 ZBTB8OSQ8IWT0 167 aa9.26□□□□□ -0.93
RER1-205ENST00000443438 CEP112Q8N8E3 955 aa9.26□□□□□ -0.93
RER1-205ENST00000443438 MNS1Q8NEH6 495 aa9.26□□□□□ -0.93
RER1-205ENST00000443438 OR6J1Q8NGC5 347 aa9.26□□□□□ -0.93
RER1-205ENST00000443438 U2AF1L4Q8WU68 220 aaKnown RBP9.26□□□□□ -0.93
RER1-205ENST00000443438 SLC20A1Q8WUM9 679 aa9.26□□□□□ -0.93
RER1-205ENST00000443438 KAT2BQ92831 832 aa9.26□□□□□ -0.93
RER1-205ENST00000443438 ELMO3Q96BJ8 720 aa9.26□□□□□ -0.93
RER1-205ENST00000443438 NT5C1BQ96P26 610 aa9.26□□□□□ -0.93
RER1-205ENST00000443438 NOX5Q96PH1 765 aa9.26□□□□□ -0.93
RER1-205ENST00000443438 ZIC5Q96T25 663 aa9.26□□□□□ -0.93
RER1-205ENST00000443438 PCDHB18PQ96TA0 734 aa9.26□□□□□ -0.93
RER1-205ENST00000443438 CGRRF1Q99675 332 aa9.26□□□□□ -0.93
RER1-205ENST00000443438 TLR10Q9BXR5 811 aa9.26□□□□□ -0.93
RER1-205ENST00000443438 IFT122Q9HBG6 1241 aa9.26□□□□□ -0.93
RER1-205ENST00000443438 APOBEC3GQ9HC16 384 aaKnown RBP9.26□□□□□ -0.93
RER1-205ENST00000443438 LUC7LQ9NQ29 371 aaKnown RBP9.26□□□□□ -0.93
RER1-205ENST00000443438 SLC5A4Q9NY91 659 aa9.26□□□□□ -0.93
RER1-205ENST00000443438 RBAKQ9NYW8 714 aaPredicted RBP9.26□□□□□ -0.93
RER1-205ENST00000443438 CPSF3Q9UKF6 684 aaKnown RBP9.26□□□□□ -0.93
RER1-205ENST00000443438 ZHX1Q9UKY1 873 aaPredicted RBP9.26□□□□□ -0.93
RER1-205ENST00000443438 PCDHGC5Q9Y5F6 944 aa9.26□□□□□ -0.93
RER1-205ENST00000443438 A0A0A6YYK5 440 aaPredicted RBP9.25□□□□□ -0.93
RER1-205ENST00000443438 GRID2IPA4D2P6 1211 aa9.25□□□□□ -0.93
RER1-205ENST00000443438 H3BRB1 525 aa9.25□□□□□ -0.93
RER1-205ENST00000443438 PDE2AO00408 941 aaPredicted RBP9.25□□□□□ -0.93
RER1-205ENST00000443438 MEFVO15553 781 aaPredicted RBP9.25□□□□□ -0.93
RER1-205ENST00000443438 B4GALT5O43286 388 aa9.25□□□□□ -0.93
RER1-205ENST00000443438 NCK2O43639 380 aa9.25□□□□□ -0.93
RER1-205ENST00000443438 BUB1O43683 1085 aa9.25□□□□□ -0.93
RER1-205ENST00000443438 SRGAP2O75044 1071 aa9.25□□□□□ -0.93
RER1-205ENST00000443438 PALMO75781 387 aa9.25□□□□□ -0.93
RER1-205ENST00000443438 SGPL1O95470 568 aa9.25□□□□□ -0.93
RER1-205ENST00000443438 HLA-DRAP01903 254 aa9.25□□□□□ -0.93
RER1-205ENST00000443438 H2AFZP0C0S5 128 aa9.25□□□□□ -0.93
RER1-205ENST00000443438 CCDC172P0C7W6 258 aa9.25□□□□□ -0.93
RER1-205ENST00000443438 H2AFXP16104 143 aaPredicted RBP9.25□□□□□ -0.93
RER1-205ENST00000443438 ACO1P21399 889 aaKnown RBP9.25□□□□□ -0.93
RER1-205ENST00000443438 TNFSF9P41273 254 aa9.25□□□□□ -0.93
RER1-205ENST00000443438 TM4SF4P48230 202 aa9.25□□□□□ -0.93
RER1-205ENST00000443438 VASPP50552 380 aaPredicted RBP9.25□□□□□ -0.93
RER1-205ENST00000443438 GALCP54803 685 aa9.25□□□□□ -0.93
RER1-205ENST00000443438 MFAP3P55082 362 aa9.25□□□□□ -0.93
RER1-205ENST00000443438 IGBP1P78318 339 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms