RNA–Protein interactions for RNA: ENST00000443197.5

CALD1-210, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-210ENST00000443197 DBR1Q9UK59 544 aaKnown RBP11.34□□□□□ -0.59
CALD1-210ENST00000443197 PPP2R3BQ9Y5P8 575 aa11.34□□□□□ -0.59
CALD1-210ENST00000443197 OPLAHO14841 1288 aa11.34□□□□□ -0.59
CALD1-210ENST00000443197 VTNP04004 478 aa11.34□□□□□ -0.59
CALD1-210ENST00000443197 KRT1P04264 644 aa11.34□□□□□ -0.59
CALD1-210ENST00000443197 MMEP08473 750 aa11.34□□□□□ -0.59
CALD1-210ENST00000443197 KCNA3P22001 575 aa11.34□□□□□ -0.59
CALD1-210ENST00000443197 NLRP11P59045 1033 aaKnown RBP11.34□□□□□ -0.59
CALD1-210ENST00000443197 NOP14P78316 857 aaKnown RBP11.34□□□□□ -0.59
CALD1-210ENST00000443197 MXD4Q14582 209 aaPredicted RBP11.34□□□□□ -0.59
CALD1-210ENST00000443197 HADHQ16836 314 aaKnown RBP11.34□□□□□ -0.59
CALD1-210ENST00000443197 HYIQ5T013 277 aa11.34□□□□□ -0.59
CALD1-210ENST00000443197 SLC47A2Q86VL8 602 aa11.34□□□□□ -0.59
CALD1-210ENST00000443197 DDX42Q86XP3 938 aaKnown RBP eCLIP11.34□□□□□ -0.59
CALD1-210ENST00000443197 MTMR14Q8NCE2 650 aa11.34□□□□□ -0.59
CALD1-210ENST00000443197 AFG1LQ8WV93 481 aa11.34□□□□□ -0.59
CALD1-210ENST00000443197 RNPC3Q96LT9 517 aaKnown RBP11.34□□□□□ -0.59
CALD1-210ENST00000443197 FAM118BQ9BPY3 351 aa11.34□□□□□ -0.59
CALD1-210ENST00000443197 C2orf40Q9H1Z8 148 aa11.34□□□□□ -0.59
CALD1-210ENST00000443197 ERAP1Q9NZ08 941 aa11.34□□□□□ -0.59
CALD1-210ENST00000443197 PDHXO00330 501 aa11.33□□□□□ -0.6
CALD1-210ENST00000443197 USP2O75604 605 aaPredicted RBP11.33□□□□□ -0.6
CALD1-210ENST00000443197 ZNF286BP0CG31 522 aa11.33□□□□□ -0.6
CALD1-210ENST00000443197 CETPP11597 493 aa11.33□□□□□ -0.6
CALD1-210ENST00000443197 MUTP22033 750 aa11.33□□□□□ -0.6
CALD1-210ENST00000443197 UBA1P22314 1058 aaKnown RBP11.33□□□□□ -0.6
CALD1-210ENST00000443197 KRT81Q14533 505 aa11.33□□□□□ -0.6
CALD1-210ENST00000443197 KCNV1Q6PIU1 500 aa11.33□□□□□ -0.6
CALD1-210ENST00000443197 ARHGEF19Q8IW93 802 aa11.33□□□□□ -0.6
CALD1-210ENST00000443197 RPS6KC1Q96S38 1066 aa11.33□□□□□ -0.6
CALD1-210ENST00000443197 TTLL3Q9Y4R7 772 aa11.33□□□□□ -0.6
CALD1-210ENST00000443197 SART1O43290 800 aaKnown RBP11.33□□□□□ -0.6
CALD1-210ENST00000443197 MMP14P50281 582 aa11.33□□□□□ -0.6
CALD1-210ENST00000443197 ZNF280AP59817 542 aaPredicted RBP11.33□□□□□ -0.6
CALD1-210ENST00000443197 MEA1Q16626 185 aa11.33□□□□□ -0.6
CALD1-210ENST00000443197 ATF7IP2Q5U623 682 aa11.33□□□□□ -0.6
CALD1-210ENST00000443197 TRAPPC11Q7Z392 1133 aa11.33□□□□□ -0.6
CALD1-210ENST00000443197 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.33□□□□□ -0.6
CALD1-210ENST00000443197 TMEM35BQ8NCS4 154 aa11.33□□□□□ -0.6
CALD1-210ENST00000443197 C1orf54Q8WWF1 131 aa11.33□□□□□ -0.6
CALD1-210ENST00000443197 RSAD2Q8WXG1 361 aa11.33□□□□□ -0.6
CALD1-210ENST00000443197 SYN2Q92777 582 aaPredicted RBP11.33□□□□□ -0.6
CALD1-210ENST00000443197 KIF12Q96FN5 646 aa11.33□□□□□ -0.6
CALD1-210ENST00000443197 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.33□□□□□ -0.62e-7■□□□□ 11.1
CALD1-210ENST00000443197 VPS37BQ9H9H4 285 aa11.33□□□□□ -0.6
CALD1-210ENST00000443197 NGRNQ9NPE2 291 aaKnown RBP11.33□□□□□ -0.6
CALD1-210ENST00000443197 FEZ2Q9UHY8 353 aaPredicted RBP11.33□□□□□ -0.6
CALD1-210ENST00000443197 REXO2Q9Y3B8 237 aaKnown RBP11.33□□□□□ -0.6
CALD1-210ENST00000443197 ALG6Q9Y672 507 aa11.33□□□□□ -0.6
CALD1-210ENST00000443197 PI4K2BG5E9Z4 385 aa11.33□□□□□ -0.6
CALD1-210ENST00000443197 EXTL3O43909 919 aa11.33□□□□□ -0.6
CALD1-210ENST00000443197 GH1P01241 217 aa11.33□□□□□ -0.6
CALD1-210ENST00000443197 C6orf222P0C671 652 aaPredicted RBP11.33□□□□□ -0.6
CALD1-210ENST00000443197 CYP4F22Q6NT55 531 aa11.33□□□□□ -0.6
CALD1-210ENST00000443197 PPP1R21Q6ZMI0 780 aa11.33□□□□□ -0.6
CALD1-210ENST00000443197 RUFY4Q6ZNE9 571 aa11.33□□□□□ -0.6
CALD1-210ENST00000443197 MMS22LQ6ZRQ5 1243 aa11.33□□□□□ -0.6
CALD1-210ENST00000443197 MTMR12Q9C0I1 747 aa11.33□□□□□ -0.6
CALD1-210ENST00000443197 AGAP1Q9UPQ3 857 aa11.33□□□□□ -0.6
CALD1-210ENST00000443197 UBE4BO95155 1302 aa11.33□□□□□ -0.6
CALD1-210ENST00000443197 GOLGA6L7A0A1B0GV03 622 aa11.32□□□□□ -0.6
CALD1-210ENST00000443197 E7EVH7 732 aa11.32□□□□□ -0.6
CALD1-210ENST00000443197 CAPN9O14815 690 aa11.32□□□□□ -0.6
CALD1-210ENST00000443197 RTN2O75298 545 aa11.32□□□□□ -0.6
CALD1-210ENST00000443197 ZRANB2O95218 330 aaKnown RBP eCLIP11.32□□□□□ -0.6
CALD1-210ENST00000443197 GJB1P08034 283 aa11.32□□□□□ -0.6
CALD1-210ENST00000443197 GGCXP38435 758 aa11.32□□□□□ -0.6
CALD1-210ENST00000443197 GNGT1P63211 74 aa11.32□□□□□ -0.6
CALD1-210ENST00000443197 MYO1EQ12965 1108 aa11.32□□□□□ -0.6
CALD1-210ENST00000443197 SURF1Q15526 300 aa11.32□□□□□ -0.6
CALD1-210ENST00000443197 METTL7BQ6UX53 244 aa11.32□□□□□ -0.6
CALD1-210ENST00000443197 NIPA1Q7RTP0 329 aa11.32□□□□□ -0.6
CALD1-210ENST00000443197 RBBP8NLQ8NC74 664 aaPredicted RBP11.32□□□□□ -0.6
CALD1-210ENST00000443197 DNERQ8NFT8 737 aa11.32□□□□□ -0.6
CALD1-210ENST00000443197 TRIM11Q96F44 468 aa11.32□□□□□ -0.6
CALD1-210ENST00000443197 FAM81BQ96LP2 452 aa11.32□□□□□ -0.6
CALD1-210ENST00000443197 FERMT1Q9BQL6 677 aa11.32□□□□□ -0.6
CALD1-210ENST00000443197 RRAGCQ9HB90 399 aa11.32□□□□□ -0.6
CALD1-210ENST00000443197 RNF19AQ9NV58 838 aa11.32□□□□□ -0.6
CALD1-210ENST00000443197 PASKQ96RG2 1323 aa11.32□□□□□ -0.6
CALD1-210ENST00000443197 SGK1O00141 431 aa11.32□□□□□ -0.6
CALD1-210ENST00000443197 EBAG9O00559 213 aa11.32□□□□□ -0.6
CALD1-210ENST00000443197 VIMP08670 466 aaKnown RBP11.32□□□□□ -0.6
CALD1-210ENST00000443197 CTSHP09668 335 aa11.32□□□□□ -0.6
CALD1-210ENST00000443197 PPATQ06203 517 aa11.32□□□□□ -0.6
CALD1-210ENST00000443197 IER5Q5VY09 327 aa11.32□□□□□ -0.6
CALD1-210ENST00000443197 FAM71BQ8TC56 605 aa11.32□□□□□ -0.6
CALD1-210ENST00000443197 BAP1Q92560 729 aa11.32□□□□□ -0.6
CALD1-210ENST00000443197 CELF4Q9BZC1 486 aaKnown RBP11.32□□□□□ -0.6
CALD1-210ENST00000443197 DMGDHQ9UI17 866 aaKnown RBP11.32□□□□□ -0.6
CALD1-210ENST00000443197 ANKRD36CQ5JPF3 1778 aa11.32□□□□□ -0.6
CALD1-210ENST00000443197 N4BP2Q86UW6 1770 aaPredicted RBP11.32□□□□□ -0.6
CALD1-210ENST00000443197 GRIN3BO60391 1043 aa11.32□□□□□ -0.6
CALD1-210ENST00000443197 ECEL1O95672 775 aa11.32□□□□□ -0.6
CALD1-210ENST00000443197 ATF2P15336 505 aa11.32□□□□□ -0.6
CALD1-210ENST00000443197 COMTP21964 271 aa11.32□□□□□ -0.6
CALD1-210ENST00000443197 RFC5P40937 340 aa11.32□□□□□ -0.6
CALD1-210ENST00000443197 OAZ1P54368 228 aa11.32□□□□□ -0.6
CALD1-210ENST00000443197 PPP2R5DQ14738 602 aa11.32□□□□□ -0.6
CALD1-210ENST00000443197 KIZQ2M2Z5 673 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms