RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 POMCP01189 267 aa16.45■□□□□ 0.22
CSNK1E-210ENST00000442216 ALDH2P05091 517 aa16.45■□□□□ 0.22
CSNK1E-210ENST00000442216 GALTP07902 379 aa16.45■□□□□ 0.22
CSNK1E-210ENST00000442216 AFMP43652 599 aa16.45■□□□□ 0.22
CSNK1E-210ENST00000442216 SCNN1GP51170 649 aa16.45■□□□□ 0.22
CSNK1E-210ENST00000442216 AFF1P51825 1210 aaKnown RBP16.45■□□□□ 0.22
CSNK1E-210ENST00000442216 YARSP54577 528 aaKnown RBP16.45■□□□□ 0.22
CSNK1E-210ENST00000442216 KRT17Q04695 432 aa16.45■□□□□ 0.22
CSNK1E-210ENST00000442216 EHHADHQ08426 723 aa16.45■□□□□ 0.22
CSNK1E-210ENST00000442216 TIGD5Q53EQ6 642 aa16.45■□□□□ 0.22
CSNK1E-210ENST00000442216 ZC2HC1CQ53FD0 456 aaPredicted RBP16.45■□□□□ 0.22
CSNK1E-210ENST00000442216 L1TD1Q5T7N2 865 aaKnown RBP16.45■□□□□ 0.22
CSNK1E-210ENST00000442216 SLFN12LQ6IEE8 588 aa16.45■□□□□ 0.22
CSNK1E-210ENST00000442216 COLGALT2Q8IYK4 626 aa16.45■□□□□ 0.22
CSNK1E-210ENST00000442216 PAGE5Q96GU1 130 aa16.45■□□□□ 0.22
CSNK1E-210ENST00000442216 CCDC34Q96HJ3 373 aa16.45■□□□□ 0.22
CSNK1E-210ENST00000442216 ZBTB45Q96K62 511 aaPredicted RBP16.45■□□□□ 0.22
CSNK1E-210ENST00000442216 ZFP42Q96MM3 310 aa16.45■□□□□ 0.22
CSNK1E-210ENST00000442216 ACAP3Q96P50 834 aa16.45■□□□□ 0.22
CSNK1E-210ENST00000442216 MIOSQ9NXC5 875 aa16.45■□□□□ 0.22
CSNK1E-210ENST00000442216 STK39Q9UEW8 545 aa16.45■□□□□ 0.22
CSNK1E-210ENST00000442216 PUF60Q9UHX1 559 aaKnown RBP16.45■□□□□ 0.22
CSNK1E-210ENST00000442216 STYXL1Q9Y6J8 313 aa16.45■□□□□ 0.22
CSNK1E-210ENST00000442216 ANK1P16157 1881 aa16.44■□□□□ 0.22
CSNK1E-210ENST00000442216 EIF3DO15371 548 aaKnown RBP eCLIP16.44■□□□□ 0.22
CSNK1E-210ENST00000442216 DDHD2O94830 711 aa16.44■□□□□ 0.22
CSNK1E-210ENST00000442216 ZNF202O95125 648 aa16.44■□□□□ 0.22
CSNK1E-210ENST00000442216 THP07101 528 aa16.44■□□□□ 0.22
CSNK1E-210ENST00000442216 XKR4Q5GH76 650 aa16.44■□□□□ 0.22
CSNK1E-210ENST00000442216 PDE12Q6L8Q7 609 aaKnown RBP16.44■□□□□ 0.22
CSNK1E-210ENST00000442216 KANK3Q6NY19 840 aa16.44■□□□□ 0.22
CSNK1E-210ENST00000442216 ALKAL1Q6UXT8 129 aa16.44■□□□□ 0.22
CSNK1E-210ENST00000442216 ZBTB33Q86T24 672 aa16.44■□□□□ 0.22
CSNK1E-210ENST00000442216 ZNF280BQ86YH2 543 aa16.44■□□□□ 0.22
CSNK1E-210ENST00000442216 POF1BQ8WVV4 589 aa16.44■□□□□ 0.22
CSNK1E-210ENST00000442216 ACCSQ96QU6 501 aa16.44■□□□□ 0.22
CSNK1E-210ENST00000442216 GOLPH3LQ9H4A5 285 aa16.44■□□□□ 0.22
CSNK1E-210ENST00000442216 TMEM206Q9H813 350 aa16.44■□□□□ 0.22
CSNK1E-210ENST00000442216 ALG13Q9NP73 1137 aaKnown RBP16.44■□□□□ 0.22
CSNK1E-210ENST00000442216 KLK14Q9P0G3 267 aa16.44■□□□□ 0.22
CSNK1E-210ENST00000442216 TBC1D7Q9P0N9 293 aa16.44■□□□□ 0.22
CSNK1E-210ENST00000442216 ANKFY1Q9P2R3 1169 aa16.44■□□□□ 0.22
CSNK1E-210ENST00000442216 DNAJB4Q9UDY4 337 aa16.44■□□□□ 0.22
CSNK1E-210ENST00000442216 GDAQ9Y2T3 454 aa16.44■□□□□ 0.22
CSNK1E-210ENST00000442216 A0A0B4J269 797 aa16.43■□□□□ 0.22
CSNK1E-210ENST00000442216 NR1I2O75469 434 aa16.43■□□□□ 0.22
CSNK1E-210ENST00000442216 MATR3P43243 847 aaKnown RBP eCLIP16.43■□□□□ 0.22
CSNK1E-210ENST00000442216 SLC11A1P49279 550 aa16.43■□□□□ 0.22
CSNK1E-210ENST00000442216 POU5F1Q01860 360 aaKnown RBP16.43■□□□□ 0.22
CSNK1E-210ENST00000442216 CUL4BQ13620 913 aa16.43■□□□□ 0.22
CSNK1E-210ENST00000442216 CAMK1Q14012 370 aa16.43■□□□□ 0.22
CSNK1E-210ENST00000442216 POSTNQ15063 836 aa16.43■□□□□ 0.22
CSNK1E-210ENST00000442216 FAM26FQ5R3K3 315 aa16.43■□□□□ 0.22
CSNK1E-210ENST00000442216 SLC39A4Q6P5W5 647 aa16.43■□□□□ 0.22
CSNK1E-210ENST00000442216 KRBA2Q6ZNG9 492 aa16.43■□□□□ 0.22
CSNK1E-210ENST00000442216 CEP120Q8N960 986 aa16.43■□□□□ 0.22
CSNK1E-210ENST00000442216 TMEM169Q96HH4 297 aa16.43■□□□□ 0.22
CSNK1E-210ENST00000442216 IGSF21Q96ID5 467 aa16.43■□□□□ 0.22
CSNK1E-210ENST00000442216 GBP3Q9H0R5 595 aa16.43■□□□□ 0.22
CSNK1E-210ENST00000442216 BLZF1Q9H2G9 400 aa16.43■□□□□ 0.22
CSNK1E-210ENST00000442216 NSUN3Q9H649 340 aaKnown RBP16.43■□□□□ 0.22
CSNK1E-210ENST00000442216 TLR9Q9NR96 1032 aa16.43■□□□□ 0.22
CSNK1E-210ENST00000442216 FAN1Q9Y2M0 1017 aa16.43■□□□□ 0.22
CSNK1E-210ENST00000442216 MYO7AQ13402 2215 aa16.43■□□□□ 0.22
CSNK1E-210ENST00000442216 UBE4BO95155 1302 aa16.43■□□□□ 0.22
CSNK1E-210ENST00000442216 PTGESO14684 152 aa16.42■□□□□ 0.22
CSNK1E-210ENST00000442216 NRP1O14786 923 aa16.42■□□□□ 0.22
CSNK1E-210ENST00000442216 OGTO15294 1046 aa16.42■□□□□ 0.22
CSNK1E-210ENST00000442216 B4GALT3O60512 393 aa16.42■□□□□ 0.22
CSNK1E-210ENST00000442216 CLTAP09496 248 aa16.42■□□□□ 0.22
CSNK1E-210ENST00000442216 MYBP10242 640 aa16.42■□□□□ 0.22
CSNK1E-210ENST00000442216 CASP5P51878 434 aa16.42■□□□□ 0.22
CSNK1E-210ENST00000442216 PSMD2Q13200 908 aa16.42■□□□□ 0.22
CSNK1E-210ENST00000442216 TUSC3Q13454 348 aa16.42■□□□□ 0.22
CSNK1E-210ENST00000442216 DDX53Q86TM3 631 aaKnown RBP16.42■□□□□ 0.22
CSNK1E-210ENST00000442216 FMR1NBQ8N0W7 255 aaPredicted RBP16.42■□□□□ 0.22
CSNK1E-210ENST00000442216 TMEM87AQ8NBN3 555 aa16.42■□□□□ 0.22
CSNK1E-210ENST00000442216 SNX27Q96L92 541 aa16.42■□□□□ 0.22
CSNK1E-210ENST00000442216 IPO9Q96P70 1041 aaKnown RBP16.42■□□□□ 0.22
CSNK1E-210ENST00000442216 TSPAN18Q96SJ8 248 aa16.42■□□□□ 0.22
CSNK1E-210ENST00000442216 HAPLN2Q9GZV7 340 aa16.42■□□□□ 0.22
CSNK1E-210ENST00000442216 PLEKHA5Q9HAU0 1116 aa16.42■□□□□ 0.22
CSNK1E-210ENST00000442216 CNTN3Q9P232 1028 aa16.42■□□□□ 0.22
CSNK1E-210ENST00000442216 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.42■□□□□ 0.22
CSNK1E-210ENST00000442216 CDH23Q9H251 3354 aa16.41■□□□□ 0.22
CSNK1E-210ENST00000442216 NT5C1B-RDH14C9J2C7 533 aa16.41■□□□□ 0.22
CSNK1E-210ENST00000442216 ANKRD63C9JTQ0 380 aa16.41■□□□□ 0.22
CSNK1E-210ENST00000442216 FSCN2O14926 492 aa16.41■□□□□ 0.22
CSNK1E-210ENST00000442216 KLRC4O43908 158 aa16.41■□□□□ 0.22
CSNK1E-210ENST00000442216 FAM189A1O60320 539 aa16.41■□□□□ 0.22
CSNK1E-210ENST00000442216 KCNE1P15382 129 aa16.41■□□□□ 0.22
CSNK1E-210ENST00000442216 DNAJB1P25685 340 aa16.41■□□□□ 0.22
CSNK1E-210ENST00000442216 PBX3P40426 434 aa16.41■□□□□ 0.22
CSNK1E-210ENST00000442216 OSTNP61366 133 aa16.41■□□□□ 0.22
CSNK1E-210ENST00000442216 FAM160A1Q05DH4 1040 aa16.41■□□□□ 0.22
CSNK1E-210ENST00000442216 BMS1Q14692 1282 aaKnown RBP16.41■□□□□ 0.22
CSNK1E-210ENST00000442216 NAB2Q15742 525 aa16.41■□□□□ 0.22
CSNK1E-210ENST00000442216 EPM2AIP1Q7L775 607 aaPredicted RBP16.41■□□□□ 0.22
CSNK1E-210ENST00000442216 GRAMD1CQ8IYS0 662 aa16.41■□□□□ 0.22
CSNK1E-210ENST00000442216 ENGASEQ8NFI3 743 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms