RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 TARSL2A2RTX5 802 aaKnown RBP8□□□□□ -1.13
CDC42BPA-208ENST00000442054 CA3P07451 260 aa8□□□□□ -1.13
CDC42BPA-208ENST00000442054 ITIH3Q06033 890 aa8□□□□□ -1.13
CDC42BPA-208ENST00000442054 ZCWPW2Q504Y3 356 aa8□□□□□ -1.13
CDC42BPA-208ENST00000442054 ZNF569Q5MCW4 686 aa8□□□□□ -1.13
CDC42BPA-208ENST00000442054 C9orf50Q5SZB4 431 aa8□□□□□ -1.13
CDC42BPA-208ENST00000442054 TCERG1LQ5VWI1 586 aa8□□□□□ -1.13
CDC42BPA-208ENST00000442054 MTHFD1LQ6UB35 978 aa8□□□□□ -1.13
CDC42BPA-208ENST00000442054 RBM23Q86U06 439 aaKnown RBP8□□□□□ -1.13
CDC42BPA-208ENST00000442054 IFNLR1Q8IU57 520 aaPredicted RBP8□□□□□ -1.13
CDC42BPA-208ENST00000442054 CREG2Q8IUH2 290 aa8□□□□□ -1.13
CDC42BPA-208ENST00000442054 NEK11Q8NG66 645 aa8□□□□□ -1.13
CDC42BPA-208ENST00000442054 BAP1Q92560 729 aa8□□□□□ -1.13
CDC42BPA-208ENST00000442054 NAPGQ99747 312 aaPredicted RBP8□□□□□ -1.13
CDC42BPA-208ENST00000442054 TRIM9Q9C026 710 aa8□□□□□ -1.13
CDC42BPA-208ENST00000442054 ZNF576Q9H609 170 aa8□□□□□ -1.13
CDC42BPA-208ENST00000442054 PCDHA2Q9Y5H9 948 aa8□□□□□ -1.13
CDC42BPA-208ENST00000442054 UMODL1Q5DID0 1318 aa8□□□□□ -1.13
CDC42BPA-208ENST00000442054 EIF3CLB5ME19 914 aaKnown RBP8□□□□□ -1.13
CDC42BPA-208ENST00000442054 SLC37A4O43826 429 aa8□□□□□ -1.13
CDC42BPA-208ENST00000442054 CLK2P49760 499 aaKnown RBP8□□□□□ -1.13
CDC42BPA-208ENST00000442054 TEX35Q5T0J7 233 aa8□□□□□ -1.13
CDC42BPA-208ENST00000442054 ANKRD40Q6AI12 368 aa8□□□□□ -1.13
CDC42BPA-208ENST00000442054 MNS1Q8NEH6 495 aa8□□□□□ -1.13
CDC42BPA-208ENST00000442054 ZBTB10Q96DT7 871 aa8□□□□□ -1.13
CDC42BPA-208ENST00000442054 PCMTD1Q96MG8 357 aaPredicted RBP8□□□□□ -1.13
CDC42BPA-208ENST00000442054 EIF3CQ99613 913 aaKnown RBP8□□□□□ -1.13
CDC42BPA-208ENST00000442054 VPS16Q9H269 839 aa8□□□□□ -1.13
CDC42BPA-208ENST00000442054 ARGLU1Q9NWB6 273 aaPredicted RBP8□□□□□ -1.13
CDC42BPA-208ENST00000442054 SALL4Q9UJQ4 1053 aa8□□□□□ -1.13
CDC42BPA-208ENST00000442054 RBAK-RBAKDNI3L0D1 243 aa8□□□□□ -1.13
CDC42BPA-208ENST00000442054 PITPNM1O00562 1244 aa8□□□□□ -1.13
CDC42BPA-208ENST00000442054 BRD2P25440 801 aaKnown RBP8□□□□□ -1.13
CDC42BPA-208ENST00000442054 STK4Q13043 487 aa8□□□□□ -1.13
CDC42BPA-208ENST00000442054 ITGB3BPQ13352 177 aaPredicted RBP8□□□□□ -1.13
CDC42BPA-208ENST00000442054 AAK1Q2M2I8 961 aa8□□□□□ -1.13
CDC42BPA-208ENST00000442054 ZNF568Q3ZCX4 644 aa8□□□□□ -1.13
CDC42BPA-208ENST00000442054 HGSNATQ68CP4 663 aa8□□□□□ -1.13
CDC42BPA-208ENST00000442054 LRRC55Q6ZSA7 311 aa8□□□□□ -1.13
CDC42BPA-208ENST00000442054 AENQ8WTP8 325 aaKnown RBP8□□□□□ -1.13
CDC42BPA-208ENST00000442054 PNMA5Q96PV4 448 aa8□□□□□ -1.13
CDC42BPA-208ENST00000442054 SH3GL2Q99962 352 aa8□□□□□ -1.13
CDC42BPA-208ENST00000442054 SLITRK6Q9H5Y7 841 aa8□□□□□ -1.13
CDC42BPA-208ENST00000442054 MMRN2Q9H8L6 949 aa8□□□□□ -1.13
CDC42BPA-208ENST00000442054 PDE11AQ9HCR9 933 aa8□□□□□ -1.13
CDC42BPA-208ENST00000442054 MYO6Q9UM54 1294 aa8□□□□□ -1.13
CDC42BPA-208ENST00000442054 NENFQ9UMX5 172 aa8□□□□□ -1.13
CDC42BPA-208ENST00000442054 DUSP10Q9Y6W6 482 aa8□□□□□ -1.13
CDC42BPA-208ENST00000442054 PTPRZ1P23471 2315 aaPredicted RBP8□□□□□ -1.13
CDC42BPA-208ENST00000442054 CTAGE9A4FU28 777 aa7.99□□□□□ -1.13
CDC42BPA-208ENST00000442054 TMEM150BA6NC51 233 aa7.99□□□□□ -1.13
CDC42BPA-208ENST00000442054 TRIM43BA6NCK2 446 aa7.99□□□□□ -1.13
CDC42BPA-208ENST00000442054 NRDCO43847 1150 aa7.99□□□□□ -1.13
CDC42BPA-208ENST00000442054 CYP3A4P08684 503 aa7.99□□□□□ -1.13
CDC42BPA-208ENST00000442054 SPAG1Q07617 926 aa7.99□□□□□ -1.13
CDC42BPA-208ENST00000442054 GPM6BQ13491 265 aa7.99□□□□□ -1.13
CDC42BPA-208ENST00000442054 CASP8Q14790 479 aa7.99□□□□□ -1.13
CDC42BPA-208ENST00000442054 KLHL10Q6JEL2 608 aa7.99□□□□□ -1.13
CDC42BPA-208ENST00000442054 NOTUMQ6P988 496 aa7.99□□□□□ -1.13
CDC42BPA-208ENST00000442054 MOXD1Q6UVY6 613 aa7.99□□□□□ -1.13
CDC42BPA-208ENST00000442054 RUFY4Q6ZNE9 571 aa7.99□□□□□ -1.13
CDC42BPA-208ENST00000442054 Q7L0L9 218 aa7.99□□□□□ -1.13
CDC42BPA-208ENST00000442054 KIFAP3Q92845 792 aa7.99□□□□□ -1.13
CDC42BPA-208ENST00000442054 TRIM43Q96BQ3 446 aaPredicted RBP7.99□□□□□ -1.13
CDC42BPA-208ENST00000442054 LRCH3Q96II8 777 aa7.99□□□□□ -1.13
CDC42BPA-208ENST00000442054 RAD9AQ99638 391 aa7.99□□□□□ -1.13
CDC42BPA-208ENST00000442054 SMIM35A0A1B0GVV1 85 aa7.99□□□□□ -1.13
CDC42BPA-208ENST00000442054 E9PMD0 336 aa7.99□□□□□ -1.13
CDC42BPA-208ENST00000442054 KIAA0355O15063 1070 aa7.99□□□□□ -1.13
CDC42BPA-208ENST00000442054 PJA2O43164 708 aa7.99□□□□□ -1.13
CDC42BPA-208ENST00000442054 GAS2O43903 313 aaKnown RBP7.99□□□□□ -1.13
CDC42BPA-208ENST00000442054 GRB10Q13322 594 aa7.99□□□□□ -1.13
CDC42BPA-208ENST00000442054 BIRC3Q13489 604 aa7.99□□□□□ -1.13
CDC42BPA-208ENST00000442054 DHTKD1Q96HY7 919 aaPredicted RBP7.99□□□□□ -1.13
CDC42BPA-208ENST00000442054 UPF3AQ9H1J1 476 aaKnown RBP7.99□□□□□ -1.13
CDC42BPA-208ENST00000442054 FEZ2Q9UHY8 353 aaPredicted RBP7.99□□□□□ -1.13
CDC42BPA-208ENST00000442054 HPCAL4Q9UM19 191 aa7.99□□□□□ -1.13
CDC42BPA-208ENST00000442054 MYO7AQ13402 2215 aa7.99□□□□□ -1.13
CDC42BPA-208ENST00000442054 ALDH2P05091 517 aa7.99□□□□□ -1.13
CDC42BPA-208ENST00000442054 PRKCBP05771 671 aa7.99□□□□□ -1.13
CDC42BPA-208ENST00000442054 KRT9P35527 623 aa7.99□□□□□ -1.13
CDC42BPA-208ENST00000442054 FOXR1Q6PIV2 292 aa7.99□□□□□ -1.13
CDC42BPA-208ENST00000442054 DPH6Q7L8W6 267 aa7.99□□□□□ -1.13
CDC42BPA-208ENST00000442054 POMGNT1Q8WZA1 660 aa7.99□□□□□ -1.13
CDC42BPA-208ENST00000442054 ZNF558Q96NG5 402 aa7.99□□□□□ -1.13
CDC42BPA-208ENST00000442054 TGS1Q96RS0 853 aaKnown RBP7.99□□□□□ -1.13
CDC42BPA-208ENST00000442054 IMPG2Q9BZV3 1241 aa7.99□□□□□ -1.13
CDC42BPA-208ENST00000442054 CUEDC2Q9H467 287 aa7.99□□□□□ -1.13
CDC42BPA-208ENST00000442054 MAGEF1Q9HAY2 307 aa7.99□□□□□ -1.13
CDC42BPA-208ENST00000442054 ARHGAP20Q9P2F6 1191 aa7.99□□□□□ -1.13
CDC42BPA-208ENST00000442054 PLAGL2Q9UPG8 496 aa7.99□□□□□ -1.13
CDC42BPA-208ENST00000442054 FAN1Q9Y2M0 1017 aa7.99□□□□□ -1.13
CDC42BPA-208ENST00000442054 PSME4Q14997 1843 aa7.98□□□□□ -1.13
CDC42BPA-208ENST00000442054 CLDN3O15551 220 aa7.98□□□□□ -1.13
CDC42BPA-208ENST00000442054 KIF5CO60282 957 aa7.98□□□□□ -1.13
CDC42BPA-208ENST00000442054 NOL4O94818 638 aa7.98□□□□□ -1.13
CDC42BPA-208ENST00000442054 PLA2G4BP0C869 781 aa7.98□□□□□ -1.13
CDC42BPA-208ENST00000442054 PRLRP16471 622 aa7.98□□□□□ -1.13
CDC42BPA-208ENST00000442054 VASPP50552 380 aaPredicted RBP7.98□□□□□ -1.13
CDC42BPA-208ENST00000442054 CRYBB1P53674 252 aaPredicted RBP7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms