RNA–Protein interactions for RNA: ENST00000441915.5

SEMA3B-207, Transcript of semaphorin 3B, humanhuman

TSL 1 (best)

Gene SEMA3B, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-207ENST00000441915 ANKS4BQ8N8V4 417 aa17.7■□□□□ 0.42
SEMA3B-207ENST00000441915 IL31RAQ8NI17 732 aa17.7■□□□□ 0.42
SEMA3B-207ENST00000441915 UHMK1Q8TAS1 419 aaKnown RBP17.7■□□□□ 0.42
SEMA3B-207ENST00000441915 ART4Q93070 314 aa17.7■□□□□ 0.42
SEMA3B-207ENST00000441915 ZNF317Q96PQ6 595 aaPredicted RBP17.7■□□□□ 0.42
SEMA3B-207ENST00000441915 INTS9Q9NV88 658 aaKnown RBP17.7■□□□□ 0.42
SEMA3B-207ENST00000441915 NFIBO00712 420 aa17.69■□□□□ 0.42
SEMA3B-207ENST00000441915 ECEL1O95672 775 aa17.69■□□□□ 0.42
SEMA3B-207ENST00000441915 KCNJ1P48048 391 aa17.69■□□□□ 0.42
SEMA3B-207ENST00000441915 NCKAP1LP55160 1127 aa17.69■□□□□ 0.42
SEMA3B-207ENST00000441915 CDR2Q01850 454 aa17.69■□□□□ 0.42
SEMA3B-207ENST00000441915 PPP1R7Q15435 360 aa17.69■□□□□ 0.42
SEMA3B-207ENST00000441915 MIGA2Q7L4E1 593 aa17.69■□□□□ 0.42
SEMA3B-207ENST00000441915 CCDC197Q8NCU1 140 aa17.69■□□□□ 0.42
SEMA3B-207ENST00000441915 ADAM7Q9H2U9 754 aa17.69■□□□□ 0.42
SEMA3B-207ENST00000441915 SLC40A1Q9NP59 571 aa17.69■□□□□ 0.42
SEMA3B-207ENST00000441915 GPRC5CQ9NQ84 441 aa17.69■□□□□ 0.42
SEMA3B-207ENST00000441915 TBC1D22BQ9NU19 505 aa17.69■□□□□ 0.42
SEMA3B-207ENST00000441915 RASGRF2O14827 1237 aa17.69■□□□□ 0.42
SEMA3B-207ENST00000441915 CHRNA5P30532 468 aa17.69■□□□□ 0.42
SEMA3B-207ENST00000441915 PTGER2P43116 358 aa17.69■□□□□ 0.42
SEMA3B-207ENST00000441915 LACTB2Q53H82 288 aaPredicted RBP17.69■□□□□ 0.42
SEMA3B-207ENST00000441915 RNF207Q6ZRF8 634 aa17.69■□□□□ 0.42
SEMA3B-207ENST00000441915 EP400NLQ6ZTU2 488 aa17.69■□□□□ 0.42
SEMA3B-207ENST00000441915 MCF2L2Q86YR7 1114 aa17.69■□□□□ 0.42
SEMA3B-207ENST00000441915 C12orf50Q8NA57 414 aaPredicted RBP17.69■□□□□ 0.42
SEMA3B-207ENST00000441915 SUPT20HQ8NEM7 779 aa17.69■□□□□ 0.42
SEMA3B-207ENST00000441915 ATXN2LQ8WWM7 1075 aaKnown RBP17.69■□□□□ 0.42
SEMA3B-207ENST00000441915 KIFAP3Q92845 792 aa17.69■□□□□ 0.42
SEMA3B-207ENST00000441915 SEMA4DQ92854 862 aa17.69■□□□□ 0.42
SEMA3B-207ENST00000441915 GLIS2Q9BZE0 524 aaPredicted RBP17.69■□□□□ 0.42
SEMA3B-207ENST00000441915 UBIAD1Q9Y5Z9 338 aa17.69■□□□□ 0.42
SEMA3B-207ENST00000441915 KIF1CO43896 1103 aaKnown RBP17.68■□□□□ 0.42
SEMA3B-207ENST00000441915 SIX1Q15475 284 aaPredicted RBP17.68■□□□□ 0.42
SEMA3B-207ENST00000441915 SPRED3Q2MJR0 410 aa17.68■□□□□ 0.42
SEMA3B-207ENST00000441915 TBC1D10BQ4KMP7 808 aaPredicted RBP17.68■□□□□ 0.42
SEMA3B-207ENST00000441915 FAM102BQ5T8I3 360 aa17.68■□□□□ 0.42
SEMA3B-207ENST00000441915 PCNX4Q63HM2 1172 aa17.68■□□□□ 0.42
SEMA3B-207ENST00000441915 TAOK1Q7L7X3 1001 aa17.68■□□□□ 0.42
SEMA3B-207ENST00000441915 EPS8L3Q8TE67 593 aaKnown RBP17.68■□□□□ 0.42
SEMA3B-207ENST00000441915 PARD3BQ8TEW8 1205 aa17.68■□□□□ 0.42
SEMA3B-207ENST00000441915 CCT6BQ92526 530 aa17.68■□□□□ 0.42
SEMA3B-207ENST00000441915 NT5C1BQ96P26 610 aa17.68■□□□□ 0.42
SEMA3B-207ENST00000441915 KDM4CQ9H3R0 1056 aa17.68■□□□□ 0.42
SEMA3B-207ENST00000441915 LRRC19Q9H756 370 aa17.68■□□□□ 0.42
SEMA3B-207ENST00000441915 VEZTQ9HBM0 779 aa17.68■□□□□ 0.42
SEMA3B-207ENST00000441915 TMEM8AQ9HCN3 771 aa17.68■□□□□ 0.42
SEMA3B-207ENST00000441915 COQ4Q9Y3A0 265 aa17.68■□□□□ 0.42
SEMA3B-207ENST00000441915 TMEM150BA6NC51 233 aa17.68■□□□□ 0.42
SEMA3B-207ENST00000441915 SLCO1A2P46721 670 aa17.68■□□□□ 0.42
SEMA3B-207ENST00000441915 SCTRP47872 440 aa17.68■□□□□ 0.42
SEMA3B-207ENST00000441915 GPC3P51654 580 aa17.68■□□□□ 0.42
SEMA3B-207ENST00000441915 MRPS9P82933 396 aaKnown RBP17.68■□□□□ 0.42
SEMA3B-207ENST00000441915 CCDC25Q86WR0 208 aa17.68■□□□□ 0.42
SEMA3B-207ENST00000441915 CPNE8Q86YQ8 564 aa17.68■□□□□ 0.42
SEMA3B-207ENST00000441915 C4orf19Q8IY42 314 aa17.68■□□□□ 0.42
SEMA3B-207ENST00000441915 OGFOD1Q8N543 542 aa17.68■□□□□ 0.42
SEMA3B-207ENST00000441915 SAAL1Q96ER3 474 aa17.68■□□□□ 0.42
SEMA3B-207ENST00000441915 TCEAL9Q9UHQ7 104 aa17.68■□□□□ 0.42
SEMA3B-207ENST00000441915 ZNF536O15090 1300 aa17.68■□□□□ 0.42
SEMA3B-207ENST00000441915 ASTN2O75129 1339 aaPredicted RBP17.68■□□□□ 0.42
SEMA3B-207ENST00000441915 ANKRD63C9JTQ0 380 aa17.67■□□□□ 0.42
SEMA3B-207ENST00000441915 ASAP2O43150 1006 aa17.67■□□□□ 0.42
SEMA3B-207ENST00000441915 CNGA1P29973 690 aa17.67■□□□□ 0.42
SEMA3B-207ENST00000441915 ADSSP30520 456 aa17.67■□□□□ 0.42
SEMA3B-207ENST00000441915 NSMFQ6X4W1 530 aa17.67■□□□□ 0.42
SEMA3B-207ENST00000441915 FBXL13Q8NEE6 735 aa17.67■□□□□ 0.42
SEMA3B-207ENST00000441915 HELQQ8TDG4 1101 aa17.67■□□□□ 0.42
SEMA3B-207ENST00000441915 CCDC113Q9H0I3 377 aa17.67■□□□□ 0.42
SEMA3B-207ENST00000441915 TBX20Q9UMR3 447 aa17.67■□□□□ 0.42
SEMA3B-207ENST00000441915 TBC1D12O60347 775 aa17.67■□□□□ 0.42
SEMA3B-207ENST00000441915 MCCD1P59942 119 aaPredicted RBP17.67■□□□□ 0.42
SEMA3B-207ENST00000441915 SPP2Q13103 211 aa17.67■□□□□ 0.42
SEMA3B-207ENST00000441915 XKR9Q5GH70 373 aa17.67■□□□□ 0.42
SEMA3B-207ENST00000441915 UBAP2Q5T6F2 1119 aaKnown RBP17.67■□□□□ 0.42
SEMA3B-207ENST00000441915 ACAD10Q6JQN1 1059 aa17.67■□□□□ 0.42
SEMA3B-207ENST00000441915 RSBN1LQ6PCB5 846 aaPredicted RBP17.67■□□□□ 0.42
SEMA3B-207ENST00000441915 USP37Q86T82 979 aa17.67■□□□□ 0.42
SEMA3B-207ENST00000441915 C7orf43Q8WVR3 580 aa17.67■□□□□ 0.42
SEMA3B-207ENST00000441915 PRMT1Q99873 361 aaKnown RBP17.67■□□□□ 0.42
SEMA3B-207ENST00000441915 ROPN1BQ9BZX4 212 aaPredicted RBP17.67■□□□□ 0.42
SEMA3B-207ENST00000441915 ROPN1Q9HAT0 212 aaPredicted RBP17.67■□□□□ 0.42
SEMA3B-207ENST00000441915 RAB20Q9NX57 234 aa17.67■□□□□ 0.42
SEMA3B-207ENST00000441915 CNTNAP1P78357 1384 aa17.67■□□□□ 0.42
SEMA3B-207ENST00000441915 CLDN3O15551 220 aa17.66■□□□□ 0.42
SEMA3B-207ENST00000441915 ATP2C2O75185 946 aa17.66■□□□□ 0.42
SEMA3B-207ENST00000441915 GHRP10912 638 aa17.66■□□□□ 0.42
SEMA3B-207ENST00000441915 PSMC5P62195 406 aa17.66■□□□□ 0.42
SEMA3B-207ENST00000441915 SGO2Q562F6 1265 aa17.66■□□□□ 0.42
SEMA3B-207ENST00000441915 TRMT10CQ7L0Y3 403 aaKnown RBP17.66■□□□□ 0.42
SEMA3B-207ENST00000441915 TAX1BP1Q86VP1 789 aa17.66■□□□□ 0.42
SEMA3B-207ENST00000441915 CPXCR1Q8N123 301 aa17.66■□□□□ 0.42
SEMA3B-207ENST00000441915 CLEC4DQ8WXI8 215 aa17.66■□□□□ 0.42
SEMA3B-207ENST00000441915 POP1Q99575 1024 aaKnown RBP17.66■□□□□ 0.42
SEMA3B-207ENST00000441915 TMEM39BQ9GZU3 492 aa17.66■□□□□ 0.42
SEMA3B-207ENST00000441915 SAMD15Q9P1V8 674 aa17.66■□□□□ 0.42
SEMA3B-207ENST00000441915 SUFUQ9UMX1 484 aa17.66■□□□□ 0.42
SEMA3B-207ENST00000441915 ASNSP08243 561 aa17.66■□□□□ 0.42
SEMA3B-207ENST00000441915 DLATP10515 647 aaKnown RBP17.66■□□□□ 0.42
SEMA3B-207ENST00000441915 DMP1Q13316 513 aaPredicted RBP17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms