RNA–Protein interactions for RNA: ENST00000441542.6

HDAC9-214, Transcript of histone deacetylase 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HDAC9, Length 3,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-214ENST00000441542 RARGP13631 454 aa8.02□□□□□ -1.13
HDAC9-214ENST00000441542 GALK1P51570 392 aa8.02□□□□□ -1.13
HDAC9-214ENST00000441542 ITGA8P53708 1063 aa8.02□□□□□ -1.13
HDAC9-214ENST00000441542 ZYXQ15942 572 aaKnown RBP8.02□□□□□ -1.13
HDAC9-214ENST00000441542 SGSM1Q2NKQ1 1148 aa8.02□□□□□ -1.13
HDAC9-214ENST00000441542 CCDC65Q8IXS2 484 aa8.02□□□□□ -1.13
HDAC9-214ENST00000441542 RASGEF1CQ8N431 466 aa8.02□□□□□ -1.13
HDAC9-214ENST00000441542 TGFBRAP1Q8WUH2 860 aa8.02□□□□□ -1.13
HDAC9-214ENST00000441542 SCFD1Q8WVM8 642 aa8.02□□□□□ -1.13
HDAC9-214ENST00000441542 RFFLQ8WZ73 363 aa8.02□□□□□ -1.13
HDAC9-214ENST00000441542 PLEKHG4BQ96PX9 1271 aa8.02□□□□□ -1.13
HDAC9-214ENST00000441542 CADM1Q9BY67 442 aaKnown RBP8.02□□□□□ -1.13
HDAC9-214ENST00000441542 GPCPD1Q9NPB8 672 aa8.02□□□□□ -1.13
HDAC9-214ENST00000441542 RIC8AQ9NPQ8 531 aa8.02□□□□□ -1.13
HDAC9-214ENST00000441542 DNAJC12Q9UKB3 198 aa8.02□□□□□ -1.13
HDAC9-214ENST00000441542 USP20Q9Y2K6 914 aa8.02□□□□□ -1.13
HDAC9-214ENST00000441542 STXBP5LQ9Y2K9 1186 aa8.02□□□□□ -1.13
HDAC9-214ENST00000441542 TOPAZ1Q8N9V7 1692 aa8.02□□□□□ -1.13
HDAC9-214ENST00000441542 MYH1P12882 1939 aa8.02□□□□□ -1.13
HDAC9-214ENST00000441542 POTEFA5A3E0 1075 aa8.02□□□□□ -1.13
HDAC9-214ENST00000441542 GCNT3O95395 438 aa8.02□□□□□ -1.13
HDAC9-214ENST00000441542 CALCAP01258 141 aa8.02□□□□□ -1.13
HDAC9-214ENST00000441542 POTEIP0CG38 1075 aa8.02□□□□□ -1.13
HDAC9-214ENST00000441542 CCNB1P14635 433 aa8.02□□□□□ -1.13
HDAC9-214ENST00000441542 DESP17661 470 aa8.02□□□□□ -1.13
HDAC9-214ENST00000441542 PTGIRP43119 386 aa8.02□□□□□ -1.13
HDAC9-214ENST00000441542 COG7P83436 770 aa8.02□□□□□ -1.13
HDAC9-214ENST00000441542 CCDC152Q4G0S7 254 aa8.02□□□□□ -1.13
HDAC9-214ENST00000441542 SGO2Q562F6 1265 aa8.02□□□□□ -1.13
HDAC9-214ENST00000441542 POTEGQ6S5H5 508 aa8.02□□□□□ -1.13
HDAC9-214ENST00000441542 POTEEQ6S8J3 1075 aa8.02□□□□□ -1.13
HDAC9-214ENST00000441542 C4orf50Q6ZRC1 276 aa8.02□□□□□ -1.13
HDAC9-214ENST00000441542 RNF207Q6ZRF8 634 aa8.02□□□□□ -1.13
HDAC9-214ENST00000441542 GSTA5Q7RTV2 222 aa8.02□□□□□ -1.13
HDAC9-214ENST00000441542 KRT25Q7Z3Z0 450 aa8.02□□□□□ -1.13
HDAC9-214ENST00000441542 TTC7BQ86TV6 843 aa8.02□□□□□ -1.13
HDAC9-214ENST00000441542 LCA5Q86VQ0 697 aa8.02□□□□□ -1.13
HDAC9-214ENST00000441542 ZNF444Q8N0Y2 327 aaPredicted RBP8.02□□□□□ -1.13
HDAC9-214ENST00000441542 UBL4BQ8N7F7 174 aa8.02□□□□□ -1.13
HDAC9-214ENST00000441542 EIF1ADQ8N9N8 165 aaKnown RBP8.02□□□□□ -1.13
HDAC9-214ENST00000441542 RFWD2Q8NHY2 731 aa8.02□□□□□ -1.13
HDAC9-214ENST00000441542 ZFAND2BQ8WV99 257 aa8.02□□□□□ -1.13
HDAC9-214ENST00000441542 MAGEB18Q96M61 343 aa8.02□□□□□ -1.13
HDAC9-214ENST00000441542 AK8Q96MA6 479 aa8.02□□□□□ -1.13
HDAC9-214ENST00000441542 EDEM3Q9BZQ6 932 aa8.02□□□□□ -1.13
HDAC9-214ENST00000441542 SMYD3Q9H7B4 428 aa8.02□□□□□ -1.13
HDAC9-214ENST00000441542 HEY2Q9UBP5 337 aa8.02□□□□□ -1.13
HDAC9-214ENST00000441542 MTUS1Q9ULD2 1270 aa8.02□□□□□ -1.13
HDAC9-214ENST00000441542 CTDP1Q9Y5B0 961 aaPredicted RBP8.02□□□□□ -1.13
HDAC9-214ENST00000441542 KDM3BQ7LBC6 1761 aa8.01□□□□□ -1.13
HDAC9-214ENST00000441542 EXOC1LA0A1B0GW35 172 aa8.01□□□□□ -1.13
HDAC9-214ENST00000441542 PVALEFA0A1B0GWK0 134 aa8.01□□□□□ -1.13
HDAC9-214ENST00000441542 SPDYE16A6NNV3 312 aaPredicted RBP8.01□□□□□ -1.13
HDAC9-214ENST00000441542 RSPH10B2B2RC85 870 aa8.01□□□□□ -1.13
HDAC9-214ENST00000441542 AKAP3O75969 853 aa8.01□□□□□ -1.13
HDAC9-214ENST00000441542 PSMG1O95456 288 aa8.01□□□□□ -1.13
HDAC9-214ENST00000441542 FTLP02792 175 aaPredicted RBP8.01□□□□□ -1.13
HDAC9-214ENST00000441542 FAM163BP0C2L3 166 aa8.01□□□□□ -1.13
HDAC9-214ENST00000441542 RSPH10BP0C881 870 aa8.01□□□□□ -1.13
HDAC9-214ENST00000441542 ESRRAP11474 423 aaPredicted RBP8.01□□□□□ -1.13
HDAC9-214ENST00000441542 ATP6V1B1P15313 513 aa8.01□□□□□ -1.13
HDAC9-214ENST00000441542 PRDX5P30044 214 aa8.01□□□□□ -1.13
HDAC9-214ENST00000441542 COILP38432 576 aaPredicted RBP8.01□□□□□ -1.13
HDAC9-214ENST00000441542 KDSRQ06136 332 aa8.01□□□□□ -1.13
HDAC9-214ENST00000441542 SFR1Q86XK3 245 aa8.01□□□□□ -1.13
HDAC9-214ENST00000441542 CLEC10AQ8IUN9 316 aa8.01□□□□□ -1.13
HDAC9-214ENST00000441542 EFCAB3Q8N7B9 438 aa8.01□□□□□ -1.13
HDAC9-214ENST00000441542 SH3TC2Q8TF17 1288 aa8.01□□□□□ -1.13
HDAC9-214ENST00000441542 SYN2Q92777 582 aaPredicted RBP8.01□□□□□ -1.13
HDAC9-214ENST00000441542 CCDC124Q96CT7 223 aaKnown RBP8.01□□□□□ -1.13
HDAC9-214ENST00000441542 YIPF2Q9BWQ6 316 aa8.01□□□□□ -1.13
HDAC9-214ENST00000441542 SHCBP1LQ9BZQ2 653 aa8.01□□□□□ -1.13
HDAC9-214ENST00000441542 TSPYL2Q9H2G4 693 aaPredicted RBP8.01□□□□□ -1.13
HDAC9-214ENST00000441542 ZWILCHQ9H900 591 aa8.01□□□□□ -1.13
HDAC9-214ENST00000441542 RMI1Q9H9A7 625 aa8.01□□□□□ -1.13
HDAC9-214ENST00000441542 DMAP1Q9NPF5 467 aaPredicted RBP8.01□□□□□ -1.13
HDAC9-214ENST00000441542 WDR70Q9NW82 654 aa8.01□□□□□ -1.13
HDAC9-214ENST00000441542 ATXN10Q9UBB4 475 aa8.01□□□□□ -1.13
HDAC9-214ENST00000441542 PRKAG3Q9UGI9 489 aa8.01□□□□□ -1.13
HDAC9-214ENST00000441542 SUN2Q9UH99 717 aa8.01□□□□□ -1.13
HDAC9-214ENST00000441542 ANAPC5Q9UJX4 755 aa8.01□□□□□ -1.13
HDAC9-214ENST00000441542 PNPLA7Q6ZV29 1317 aa8.01□□□□□ -1.13
HDAC9-214ENST00000441542 MYH7P12883 1935 aa8.01□□□□□ -1.13
HDAC9-214ENST00000441542 FAM47DPA6NHR8 397 aa8.01□□□□□ -1.13
HDAC9-214ENST00000441542 PDE8AO60658 829 aa8.01□□□□□ -1.13
HDAC9-214ENST00000441542 HAUS5O94927 633 aa8.01□□□□□ -1.13
HDAC9-214ENST00000441542 ENO1P06733 434 aaKnown RBP8.01□□□□□ -1.13
HDAC9-214ENST00000441542 PLA2G4BP0C869 781 aa8.01□□□□□ -1.13
HDAC9-214ENST00000441542 ATP5DP30049 168 aa8.01□□□□□ -1.13
HDAC9-214ENST00000441542 RPA3P35244 121 aaPredicted RBP8.01□□□□□ -1.13
HDAC9-214ENST00000441542 PGM1P36871 562 aa8.01□□□□□ -1.13
HDAC9-214ENST00000441542 SLC34A1Q06495 639 aa8.01□□□□□ -1.13
HDAC9-214ENST00000441542 CHRNDQ07001 517 aa8.01□□□□□ -1.13
HDAC9-214ENST00000441542 DHX34Q14147 1143 aaKnown RBP8.01□□□□□ -1.13
HDAC9-214ENST00000441542 ACAP1Q15027 740 aa8.01□□□□□ -1.13
HDAC9-214ENST00000441542 PKN2Q16513 984 aaKnown RBP8.01□□□□□ -1.13
HDAC9-214ENST00000441542 ZCWPW2Q504Y3 356 aa8.01□□□□□ -1.13
HDAC9-214ENST00000441542 RNF43Q68DV7 783 aa8.01□□□□□ -1.13
HDAC9-214ENST00000441542 SATL1Q86VE3 508 aa8.01□□□□□ -1.13
HDAC9-214ENST00000441542 SPATA24Q86W54 205 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms