RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 BORCS6Q96GS4 357 aa21.7■■□□□ 1.06
SHOX2-203ENST00000441443 KIAA1683Q9H0B3 1180 aa21.7■■□□□ 1.06
SHOX2-203ENST00000441443 NKIRAS1Q9NYS0 192 aa21.7■■□□□ 1.06
SHOX2-203ENST00000441443 PNMA6FA0A0J9YX94 578 aa21.7■■□□□ 1.06
SHOX2-203ENST00000441443 ZC2HC1CQ53FD0 456 aaPredicted RBP21.7■■□□□ 1.06
SHOX2-203ENST00000441443 RHOT2Q8IXI1 618 aa21.7■■□□□ 1.06
SHOX2-203ENST00000441443 TEKT4Q8WW24 435 aa21.7■■□□□ 1.06
SHOX2-203ENST00000441443 RPS6KC1Q96S38 1066 aa21.7■■□□□ 1.06
SHOX2-203ENST00000441443 TMX4Q9H1E5 349 aaPredicted RBP21.7■■□□□ 1.06
SHOX2-203ENST00000441443 MTUS1Q9ULD2 1270 aa21.7■■□□□ 1.06
SHOX2-203ENST00000441443 GAKO14976 1311 aa21.69■■□□□ 1.06
SHOX2-203ENST00000441443 ENTPD5O75356 428 aa21.69■■□□□ 1.06
SHOX2-203ENST00000441443 CHRNB2P17787 502 aa21.69■■□□□ 1.06
SHOX2-203ENST00000441443 EPHB2P29323 1055 aa21.69■■□□□ 1.06
SHOX2-203ENST00000441443 KRT17Q04695 432 aa21.69■■□□□ 1.06
SHOX2-203ENST00000441443 TMEM154Q6P9G4 183 aa21.69■■□□□ 1.06
SHOX2-203ENST00000441443 LONP2Q86WA8 852 aa21.69■■□□□ 1.06
SHOX2-203ENST00000441443 LBHD1Q9BQE6 289 aaPredicted RBP21.69■■□□□ 1.06
SHOX2-203ENST00000441443 BHMT2Q9H2M3 363 aa21.69■■□□□ 1.06
SHOX2-203ENST00000441443 CHKBQ9Y259 395 aa21.69■■□□□ 1.06
SHOX2-203ENST00000441443 SBF2Q86WG5 1849 aa21.69■■□□□ 1.06
SHOX2-203ENST00000441443 TAF1LQ8IZX4 1826 aa21.69■■□□□ 1.06
SHOX2-203ENST00000441443 ATP6V1C1P21283 382 aa21.69■■□□□ 1.06
SHOX2-203ENST00000441443 HOXA10P31260 410 aaPredicted RBP21.69■■□□□ 1.06
SHOX2-203ENST00000441443 PTDSS1P48651 473 aaKnown RBP21.69■■□□□ 1.06
SHOX2-203ENST00000441443 VPS41P49754 854 aa21.69■■□□□ 1.06
SHOX2-203ENST00000441443 DNAJC3Q13217 504 aa21.69■■□□□ 1.06
SHOX2-203ENST00000441443 SETDB1Q15047 1291 aa21.69■■□□□ 1.06
SHOX2-203ENST00000441443 ARHGEF18Q6ZSZ5 1173 aa21.69■■□□□ 1.06
SHOX2-203ENST00000441443 PRUNE1Q86TP1 453 aa21.69■■□□□ 1.06
SHOX2-203ENST00000441443 SYT2Q8N9I0 419 aaPredicted RBP21.69■■□□□ 1.06
SHOX2-203ENST00000441443 RDH13Q8NBN7 331 aa21.69■■□□□ 1.06
SHOX2-203ENST00000441443 AGPAT1Q99943 283 aa21.69■■□□□ 1.06
SHOX2-203ENST00000441443 INTS2Q9H0H0 1204 aaKnown RBP21.69■■□□□ 1.06
SHOX2-203ENST00000441443 LRMDAQ9H2I8 198 aa21.69■■□□□ 1.06
SHOX2-203ENST00000441443 DNAJC18Q9H819 358 aa21.69■■□□□ 1.06
SHOX2-203ENST00000441443 NHSQ6T4R5 1651 aa21.69■■□□□ 1.06
SHOX2-203ENST00000441443 THAP12O43422 761 aa21.69■■□□□ 1.06
SHOX2-203ENST00000441443 NMT1P30419 496 aaKnown RBP21.69■■□□□ 1.06
SHOX2-203ENST00000441443 PSMC2P35998 433 aaKnown RBP21.69■■□□□ 1.06
SHOX2-203ENST00000441443 SESN3P58005 492 aa21.69■■□□□ 1.06
SHOX2-203ENST00000441443 SNAP25P60880 206 aa21.69■■□□□ 1.06
SHOX2-203ENST00000441443 RNF207Q6ZRF8 634 aa21.69■■□□□ 1.06
SHOX2-203ENST00000441443 ZNF831Q5JPB2 1677 aa21.68■■□□□ 1.06
SHOX2-203ENST00000441443 USP17L10C9JJH3 530 aa21.68■■□□□ 1.06
SHOX2-203ENST00000441443 TTC4O95801 387 aa21.68■■□□□ 1.06
SHOX2-203ENST00000441443 CYP2J2P51589 502 aa21.68■■□□□ 1.06
SHOX2-203ENST00000441443 MKRN3Q13064 507 aaKnown RBP21.68■■□□□ 1.06
SHOX2-203ENST00000441443 SIX1Q15475 284 aaPredicted RBP21.68■■□□□ 1.06
SHOX2-203ENST00000441443 PHLDB3Q6NSJ2 640 aa21.68■■□□□ 1.06
SHOX2-203ENST00000441443 CDC42EP5Q6NZY7 148 aa21.68■■□□□ 1.06
SHOX2-203ENST00000441443 SP8Q8IXZ3 490 aa21.68■■□□□ 1.06
SHOX2-203ENST00000441443 FAM163AQ96GL9 167 aaPredicted RBP21.68■■□□□ 1.06
SHOX2-203ENST00000441443 TBC1D10AQ9BXI6 508 aa21.68■■□□□ 1.06
SHOX2-203ENST00000441443 COA1Q9GZY4 146 aa21.68■■□□□ 1.06
SHOX2-203ENST00000441443 SLCO1B3Q9NPD5 702 aa21.68■■□□□ 1.06
SHOX2-203ENST00000441443 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.68■■□□□ 1.06
SHOX2-203ENST00000441443 NAALADL1Q9UQQ1 740 aa21.68■■□□□ 1.06
SHOX2-203ENST00000441443 NAV1Q8NEY1 1877 aa21.68■■□□□ 1.06
SHOX2-203ENST00000441443 TULP1O00294 542 aaPredicted RBP21.68■■□□□ 1.06
SHOX2-203ENST00000441443 SPOPO43791 374 aa21.68■■□□□ 1.06
SHOX2-203ENST00000441443 TBCAO75347 108 aaKnown RBP21.68■■□□□ 1.06
SHOX2-203ENST00000441443 CBX6O95503 412 aa21.68■■□□□ 1.06
SHOX2-203ENST00000441443 MMP10P09238 476 aa21.68■■□□□ 1.06
SHOX2-203ENST00000441443 SPATA31C1P0DKV0 1188 aa21.68■■□□□ 1.06
SHOX2-203ENST00000441443 PARP6Q2NL67 630 aa21.68■■□□□ 1.06
SHOX2-203ENST00000441443 ASPRV1Q53RT3 343 aa21.68■■□□□ 1.06
SHOX2-203ENST00000441443 PRR16Q569H4 304 aa21.68■■□□□ 1.06
SHOX2-203ENST00000441443 RBM26Q5T8P6 1007 aaKnown RBP21.68■■□□□ 1.06
SHOX2-203ENST00000441443 C11orf63Q6NUN7 778 aa21.68■■□□□ 1.06
SHOX2-203ENST00000441443 LRRC37BQ96QE4 947 aa21.68■■□□□ 1.06
SHOX2-203ENST00000441443 APEX2Q9UBZ4 518 aa21.68■■□□□ 1.06
SHOX2-203ENST00000441443 CLDN3O15551 220 aa21.67■■□□□ 1.06
SHOX2-203ENST00000441443 SPAG7O75391 227 aa21.67■■□□□ 1.06
SHOX2-203ENST00000441443 POLGP54098 1239 aaPredicted RBP21.67■■□□□ 1.06
SHOX2-203ENST00000441443 CWF19L1Q69YN2 538 aaKnown RBP21.67■■□□□ 1.06
SHOX2-203ENST00000441443 ANKRD27Q96NW4 1050 aa21.67■■□□□ 1.06
SHOX2-203ENST00000441443 SRCAPQ6ZRS2 3230 aa21.67■■□□□ 1.06
SHOX2-203ENST00000441443 MRPS35P82673 323 aaKnown RBP21.67■■□□□ 1.06
SHOX2-203ENST00000441443 CCDC15Q0P6D6 951 aa21.67■■□□□ 1.06
SHOX2-203ENST00000441443 RNF220Q5VTB9 566 aa21.67■■□□□ 1.06
SHOX2-203ENST00000441443 ATG4AQ8WYN0 398 aa21.67■■□□□ 1.06
SHOX2-203ENST00000441443 DLGAP2Q9P1A6 1054 aa21.67■■□□□ 1.06
SHOX2-203ENST00000441443 MAST2Q6P0Q8 1798 aa21.67■■□□□ 1.06
SHOX2-203ENST00000441443 MYO3BQ8WXR4 1341 aa21.67■■□□□ 1.06
SHOX2-203ENST00000441443 UTRNP46939 3433 aa21.67■■□□□ 1.06
SHOX2-203ENST00000441443 RFC5P40937 340 aa21.66■■□□□ 1.06
SHOX2-203ENST00000441443 WDR4P57081 412 aaKnown RBP21.66■■□□□ 1.06
SHOX2-203ENST00000441443 STRN3Q13033 797 aa21.66■■□□□ 1.06
SHOX2-203ENST00000441443 ACVR2BQ13705 512 aa21.66■■□□□ 1.06
SHOX2-203ENST00000441443 CYP1B1Q16678 543 aa21.66■■□□□ 1.06
SHOX2-203ENST00000441443 AGGF1Q8N302 714 aaeCLIP21.66■■□□□ 1.06
SHOX2-203ENST00000441443 C2CD2Q9Y426 696 aa21.66■■□□□ 1.06
SHOX2-203ENST00000441443 FRMPD4Q14CM0 1322 aa21.66■■□□□ 1.06
SHOX2-203ENST00000441443 GPC5P78333 572 aa21.66■■□□□ 1.06
SHOX2-203ENST00000441443 ASAP3Q8TDY4 903 aa21.66■■□□□ 1.06
SHOX2-203ENST00000441443 DNAJC9Q8WXX5 260 aa21.66■■□□□ 1.06
SHOX2-203ENST00000441443 ZCWPW1Q9H0M4 648 aa21.66■■□□□ 1.06
SHOX2-203ENST00000441443 GGPS1O95749 300 aa21.66■■□□□ 1.06
SHOX2-203ENST00000441443 ITGA8P53708 1063 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms