RNA–Protein interactions for RNA: ENST00000441310.6

PMS1-213, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMS1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-213ENST00000441310 TNFAIP8L3Q5GJ75 292 aa17.95■□□□□ 0.46
PMS1-213ENST00000441310 C10orf76Q5T2E6 689 aa17.95■□□□□ 0.46
PMS1-213ENST00000441310 SDCCAG8Q86SQ7 713 aaPredicted RBP17.95■□□□□ 0.46
PMS1-213ENST00000441310 SIAH1Q8IUQ4 282 aa17.95■□□□□ 0.46
PMS1-213ENST00000441310 CDK5RAP3Q96JB5 506 aa17.95■□□□□ 0.46
PMS1-213ENST00000441310 GANQ9H2C0 597 aa17.95■□□□□ 0.46
PMS1-213ENST00000441310 CHKBQ9Y259 395 aa17.95■□□□□ 0.46
PMS1-213ENST00000441310 LRRC37AA6NMS7 1700 aa17.94■□□□□ 0.46
PMS1-213ENST00000441310 RRP1BQ14684 758 aaKnown RBP17.94■□□□□ 0.46
PMS1-213ENST00000441310 RCN1Q15293 331 aa17.94■□□□□ 0.46
PMS1-213ENST00000441310 RFWD3Q6PCD5 774 aa17.94■□□□□ 0.46
PMS1-213ENST00000441310 SLFN11Q7Z7L1 901 aa17.94■□□□□ 0.46
PMS1-213ENST00000441310 LRRC37BQ96QE4 947 aa17.94■□□□□ 0.46
PMS1-213ENST00000441310 DCLRE1BQ9H816 532 aa17.94■□□□□ 0.46
PMS1-213ENST00000441310 ZNF277Q9NRM2 450 aaPredicted RBP17.94■□□□□ 0.46
PMS1-213ENST00000441310 TMOD4Q9NZQ9 345 aa17.94■□□□□ 0.46
PMS1-213ENST00000441310 PHF24Q9UPV7 400 aa17.94■□□□□ 0.46
PMS1-213ENST00000441310 FAM187AA6NFU0 413 aa17.94■□□□□ 0.46
PMS1-213ENST00000441310 LAD1O00515 517 aa17.94■□□□□ 0.46
PMS1-213ENST00000441310 TJP3O95049 919 aa17.94■□□□□ 0.46
PMS1-213ENST00000441310 ABCB4P21439 1286 aa17.94■□□□□ 0.46
PMS1-213ENST00000441310 SMARCA1P28370 1054 aa17.94■□□□□ 0.46
PMS1-213ENST00000441310 MTFR1Q15390 333 aa17.94■□□□□ 0.46
PMS1-213ENST00000441310 ARHGAP27Q6ZUM4 889 aa17.94■□□□□ 0.46
PMS1-213ENST00000441310 DEFB132Q7Z7B7 95 aa17.94■□□□□ 0.46
PMS1-213ENST00000441310 DTX3LQ8TDB6 740 aa17.94■□□□□ 0.46
PMS1-213ENST00000441310 CSRNP1Q96S65 589 aa17.94■□□□□ 0.46
PMS1-213ENST00000441310 DNAJC17Q9NVM6 304 aaKnown RBP17.94■□□□□ 0.46
PMS1-213ENST00000441310 PTPN22Q9Y2R2 807 aa17.94■□□□□ 0.46
PMS1-213ENST00000441310 PLIN4Q96Q06 1357 aa17.94■□□□□ 0.46
PMS1-213ENST00000441310 WASHC2DQ5SRD0 308 aa17.94■□□□□ 0.46
PMS1-213ENST00000441310 ACBD5Q5T8D3 534 aaPredicted RBP17.94■□□□□ 0.46
PMS1-213ENST00000441310 STYK1Q6J9G0 422 aa17.94■□□□□ 0.46
PMS1-213ENST00000441310 MYOCDQ8IZQ8 938 aa17.94■□□□□ 0.46
PMS1-213ENST00000441310 SLC7A6OSQ96CW6 309 aaPredicted RBP17.94■□□□□ 0.46
PMS1-213ENST00000441310 AK8Q96MA6 479 aa17.94■□□□□ 0.46
PMS1-213ENST00000441310 NT5C3AQ9H0P0 336 aa17.94■□□□□ 0.46
PMS1-213ENST00000441310 BLOC1S4Q9NUP1 217 aa17.94■□□□□ 0.46
PMS1-213ENST00000441310 RHBDL2Q9NX52 303 aa17.94■□□□□ 0.46
PMS1-213ENST00000441310 ATXN10Q9UBB4 475 aa17.94■□□□□ 0.46
PMS1-213ENST00000441310 F5H6K3 240 aa17.93■□□□□ 0.46
PMS1-213ENST00000441310 ATP6V1G1O75348 118 aa17.93■□□□□ 0.46
PMS1-213ENST00000441310 ABCB5Q2M3G0 1257 aa17.93■□□□□ 0.46
PMS1-213ENST00000441310 GPATCH4Q5T3I0 446 aaKnown RBP17.93■□□□□ 0.46
PMS1-213ENST00000441310 KCNK18Q7Z418 384 aa17.93■□□□□ 0.46
PMS1-213ENST00000441310 CDAN1Q8IWY9 1227 aa17.93■□□□□ 0.46
PMS1-213ENST00000441310 SNX29Q8TEQ0 813 aa17.93■□□□□ 0.46
PMS1-213ENST00000441310 NRG4Q8WWG1 115 aa17.93■□□□□ 0.46
PMS1-213ENST00000441310 CCDC17Q96LX7 622 aa17.93■□□□□ 0.46
PMS1-213ENST00000441310 TMEM109Q9BVC6 243 aa17.93■□□□□ 0.46
PMS1-213ENST00000441310 STK32BQ9NY57 414 aa17.93■□□□□ 0.46
PMS1-213ENST00000441310 BLOC1S6Q9UL45 172 aa17.93■□□□□ 0.46
PMS1-213ENST00000441310 POLGP54098 1239 aaPredicted RBP17.93■□□□□ 0.46
PMS1-213ENST00000441310 GRB10Q13322 594 aa17.93■□□□□ 0.46
PMS1-213ENST00000441310 ZYXQ15942 572 aaKnown RBP17.93■□□□□ 0.46
PMS1-213ENST00000441310 CNPY1Q3B7I2 92 aa17.93■□□□□ 0.46
PMS1-213ENST00000441310 USP20Q9Y2K6 914 aa17.93■□□□□ 0.46
PMS1-213ENST00000441310 PCDHGA4Q9Y5G9 962 aa17.93■□□□□ 0.46
PMS1-213ENST00000441310 USH1CQ9Y6N9 552 aa17.93■□□□□ 0.46
PMS1-213ENST00000441310 ESYT2A0FGR8 921 aa17.93■□□□□ 0.46
PMS1-213ENST00000441310 ANKRD63C9JTQ0 380 aa17.93■□□□□ 0.46
PMS1-213ENST00000441310 ATP5HO75947 161 aa17.93■□□□□ 0.46
PMS1-213ENST00000441310 FOXN2P32314 431 aa17.93■□□□□ 0.46
PMS1-213ENST00000441310 CCDC15Q0P6D6 951 aa17.93■□□□□ 0.46
PMS1-213ENST00000441310 LARP4BQ92615 738 aaKnown RBP17.93■□□□□ 0.46
PMS1-213ENST00000441310 VCX3BQ9H321 246 aa17.93■□□□□ 0.46
PMS1-213ENST00000441310 VCX3AQ9NNX9 186 aa17.93■□□□□ 0.46
PMS1-213ENST00000441310 RIC8AQ9NPQ8 531 aa17.93■□□□□ 0.46
PMS1-213ENST00000441310 DDX25Q9UHL0 483 aaKnown RBP17.93■□□□□ 0.46
PMS1-213ENST00000441310 INTUQ9ULD6 942 aa17.93■□□□□ 0.46
PMS1-213ENST00000441310 MAGEA13PA6NCF6 341 aa17.92■□□□□ 0.46
PMS1-213ENST00000441310 SIGLEC16A6NMB1 481 aa17.92■□□□□ 0.46
PMS1-213ENST00000441310 KRT36O76013 467 aa17.92■□□□□ 0.46
PMS1-213ENST00000441310 PSMC4P43686 418 aa17.92■□□□□ 0.46
PMS1-213ENST00000441310 DHX34Q14147 1143 aaKnown RBP17.92■□□□□ 0.46
PMS1-213ENST00000441310 DBN1Q16643 649 aa17.92■□□□□ 0.46
PMS1-213ENST00000441310 PABPC1LQ4VXU2 614 aaKnown RBP17.92■□□□□ 0.46
PMS1-213ENST00000441310 MFSD5Q6N075 450 aa17.92■□□□□ 0.46
PMS1-213ENST00000441310 POTEAQ6S8J7 498 aa17.92■□□□□ 0.46
PMS1-213ENST00000441310 C7orf43Q8WVR3 580 aa17.92■□□□□ 0.46
PMS1-213ENST00000441310 DDX12PQ92771 950 aa17.92■□□□□ 0.46
PMS1-213ENST00000441310 PTPRN2Q92932 1015 aa17.92■□□□□ 0.46
PMS1-213ENST00000441310 MTMR9Q96QG7 549 aa17.92■□□□□ 0.46
PMS1-213ENST00000441310 DHX36Q9H2U1 1008 aaKnown RBP17.92■□□□□ 0.46
PMS1-213ENST00000441310 DDX3YO15523 660 aaKnown RBP17.92■□□□□ 0.46
PMS1-213ENST00000441310 GALCP54803 685 aa17.92■□□□□ 0.46
PMS1-213ENST00000441310 SRRM1Q8IYB3 904 aaKnown RBP17.92■□□□□ 0.46
PMS1-213ENST00000441310 FBXO41Q8TF61 875 aa17.92■□□□□ 0.46
PMS1-213ENST00000441310 SPOCK2Q92563 424 aa17.92■□□□□ 0.46
PMS1-213ENST00000441310 TIPINQ9BVW5 301 aa17.92■□□□□ 0.46
PMS1-213ENST00000441310 CARD9Q9H257 536 aa17.92■□□□□ 0.46
PMS1-213ENST00000441310 NKIRAS1Q9NYS0 192 aa17.92■□□□□ 0.46
PMS1-213ENST00000441310 PITPNM2Q9BZ72 1349 aa17.91■□□□□ 0.46
PMS1-213ENST00000441310 PVALEFA0A1B0GWK0 134 aa17.91■□□□□ 0.46
PMS1-213ENST00000441310 T-ENOLP0DO92 83 aa17.91■□□□□ 0.46
PMS1-213ENST00000441310 RARGP13631 454 aa17.91■□□□□ 0.46
PMS1-213ENST00000441310 TAC1P20366 129 aa17.91■□□□□ 0.46
PMS1-213ENST00000441310 KCNH2Q12809 1159 aa17.91■□□□□ 0.46
PMS1-213ENST00000441310 DNAJC3Q13217 504 aa17.91■□□□□ 0.46
PMS1-213ENST00000441310 EXOC3L4Q17RC7 722 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 155.7 ms