RNA–Protein interactions for RNA: ENST00000441024.6

CNOT1-202, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNOT1, Length 4,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-202ENST00000441024 MTMR2Q13614 643 aa6.79□□□□□ -1.32
CNOT1-202ENST00000441024 ZKSCAN8Q15776 578 aaPredicted RBP6.79□□□□□ -1.32
CNOT1-202ENST00000441024 SGSM1Q2NKQ1 1148 aa6.79□□□□□ -1.32
CNOT1-202ENST00000441024 NBPF9Q3BBW0 867 aa6.79□□□□□ -1.32
CNOT1-202ENST00000441024 HSP90AA5PQ58FG0 334 aa6.79□□□□□ -1.32
CNOT1-202ENST00000441024 KIAA1841Q6NSI8 718 aa6.79□□□□□ -1.32
CNOT1-202ENST00000441024 TRMT10CQ7L0Y3 403 aaKnown RBP6.79□□□□□ -1.32
CNOT1-202ENST00000441024 EPM2AIP1Q7L775 607 aaPredicted RBP6.79□□□□□ -1.32
CNOT1-202ENST00000441024 TRIM59Q8IWR1 403 aa6.79□□□□□ -1.32
CNOT1-202ENST00000441024 MMGT1Q8N4V1 131 aa6.79□□□□□ -1.32
CNOT1-202ENST00000441024 CEP120Q8N960 986 aa6.79□□□□□ -1.32
CNOT1-202ENST00000441024 GMCL1P1Q8NEA9 526 aa6.79□□□□□ -1.32
CNOT1-202ENST00000441024 RNPC3Q96LT9 517 aaKnown RBP6.79□□□□□ -1.32
CNOT1-202ENST00000441024 PITPNM3Q9BZ71 974 aa6.79□□□□□ -1.32
CNOT1-202ENST00000441024 MAGEB5Q9BZ81 275 aa6.79□□□□□ -1.32
CNOT1-202ENST00000441024 TMEM8AQ9HCN3 771 aa6.79□□□□□ -1.32
CNOT1-202ENST00000441024 CPSF2Q9P2I0 782 aaKnown RBP6.79□□□□□ -1.32
CNOT1-202ENST00000441024 BAG5Q9UL15 447 aa6.79□□□□□ -1.32
CNOT1-202ENST00000441024 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.79□□□□□ -1.32
CNOT1-202ENST00000441024 NPHP3-ACAD11A0A0J9YXS1 232 aa6.79□□□□□ -1.32
CNOT1-202ENST00000441024 TOM1L1O75674 476 aa6.79□□□□□ -1.32
CNOT1-202ENST00000441024 CHGBP05060 677 aa6.79□□□□□ -1.32
CNOT1-202ENST00000441024 JADE1Q6IE81 842 aa6.79□□□□□ -1.32
CNOT1-202ENST00000441024 MICALL2Q8IY33 904 aa6.79□□□□□ -1.32
CNOT1-202ENST00000441024 URGCPQ8TCY9 931 aa6.79□□□□□ -1.32
CNOT1-202ENST00000441024 PRPF31Q8WWY3 499 aaKnown RBP6.79□□□□□ -1.32
CNOT1-202ENST00000441024 TNIP3Q96KP6 325 aa6.79□□□□□ -1.32
CNOT1-202ENST00000441024 ZDHHC15Q96MV8 337 aa6.79□□□□□ -1.32
CNOT1-202ENST00000441024 TRPV6Q9H1D0 765 aa6.79□□□□□ -1.32
CNOT1-202ENST00000441024 TBK1Q9UHD2 729 aa6.79□□□□□ -1.32
CNOT1-202ENST00000441024 KIAA1551Q9HCM1 1747 aa6.79□□□□□ -1.32
CNOT1-202ENST00000441024 SPDYE16A6NNV3 312 aaPredicted RBP6.79□□□□□ -1.32
CNOT1-202ENST00000441024 RASA4BC9J798 803 aa6.79□□□□□ -1.32
CNOT1-202ENST00000441024 PSMD3O43242 534 aa6.79□□□□□ -1.32
CNOT1-202ENST00000441024 RASA4O43374 803 aa6.79□□□□□ -1.32
CNOT1-202ENST00000441024 IL1R1P14778 569 aa6.79□□□□□ -1.32
CNOT1-202ENST00000441024 ITIH2P19823 946 aa6.79□□□□□ -1.32
CNOT1-202ENST00000441024 XPAP23025 273 aaPredicted RBP6.79□□□□□ -1.32
CNOT1-202ENST00000441024 FXR1P51114 621 aaKnown RBP eCLIP6.79□□□□□ -1.321e-6■■■■□ 20.3
CNOT1-202ENST00000441024 HMGCS2P54868 508 aa6.79□□□□□ -1.32
CNOT1-202ENST00000441024 RBP5P82980 135 aa6.79□□□□□ -1.32
CNOT1-202ENST00000441024 BAATQ14032 418 aaPredicted RBP6.79□□□□□ -1.32
CNOT1-202ENST00000441024 RBBP5Q15291 538 aaKnown RBP6.79□□□□□ -1.32
CNOT1-202ENST00000441024 SPDYE2Q495Y8 402 aa6.79□□□□□ -1.32
CNOT1-202ENST00000441024 ZNF746Q6NUN9 644 aaPredicted RBP6.79□□□□□ -1.32
CNOT1-202ENST00000441024 LRRC31Q6UY01 552 aa6.79□□□□□ -1.32
CNOT1-202ENST00000441024 WDR75Q8IWA0 830 aaKnown RBP6.79□□□□□ -1.32
CNOT1-202ENST00000441024 ACAP3Q96P50 834 aa6.79□□□□□ -1.32
CNOT1-202ENST00000441024 DDX47Q9H0S4 455 aaKnown RBP6.79□□□□□ -1.32
CNOT1-202ENST00000441024 FAM217BQ9NTX9 383 aaPredicted RBP6.79□□□□□ -1.32
CNOT1-202ENST00000441024 HDAC6Q9UBN7 1215 aa6.79□□□□□ -1.32
CNOT1-202ENST00000441024 FAM8A1Q9UBU6 413 aa6.79□□□□□ -1.32
CNOT1-202ENST00000441024 CNOT7Q9UIV1 285 aaKnown RBP6.79□□□□□ -1.32
CNOT1-202ENST00000441024 TCRBV5S4A2TA0A5A2 114 aa6.79□□□□□ -1.32
CNOT1-202ENST00000441024 AGTP01019 485 aa6.79□□□□□ -1.32
CNOT1-202ENST00000441024 ESRRAP11474 423 aaPredicted RBP6.79□□□□□ -1.32
CNOT1-202ENST00000441024 CHRNA5P30532 468 aa6.79□□□□□ -1.32
CNOT1-202ENST00000441024 SERPINB6P35237 376 aa6.79□□□□□ -1.32
CNOT1-202ENST00000441024 GALCP54803 685 aa6.79□□□□□ -1.32
CNOT1-202ENST00000441024 MTF1Q14872 753 aa6.79□□□□□ -1.32
CNOT1-202ENST00000441024 CDO1Q16878 200 aa6.79□□□□□ -1.32
CNOT1-202ENST00000441024 Q4G0T1 1027 aa6.79□□□□□ -1.32
CNOT1-202ENST00000441024 FSCBQ5H9T9 825 aa6.79□□□□□ -1.32
CNOT1-202ENST00000441024 EFHC2Q5JST6 749 aa6.79□□□□□ -1.32
CNOT1-202ENST00000441024 MFSD14CQ5VZR4 134 aa6.79□□□□□ -1.32
CNOT1-202ENST00000441024 SPOPLQ6IQ16 392 aa6.79□□□□□ -1.32
CNOT1-202ENST00000441024 PDCD7Q8N8D1 485 aaKnown RBP6.79□□□□□ -1.32
CNOT1-202ENST00000441024 ANKS1AQ92625 1134 aa6.79□□□□□ -1.32
CNOT1-202ENST00000441024 GMCL1Q96IK5 515 aa6.79□□□□□ -1.32
CNOT1-202ENST00000441024 GCNAQ96QF7 691 aa6.79□□□□□ -1.32
CNOT1-202ENST00000441024 CHP1Q99653 195 aa6.79□□□□□ -1.32
CNOT1-202ENST00000441024 TACO1Q9BSH4 297 aaKnown RBP6.79□□□□□ -1.32
CNOT1-202ENST00000441024 MRPL40Q9NQ50 206 aaKnown RBP6.79□□□□□ -1.32
CNOT1-202ENST00000441024 KLHL8Q9P2G9 620 aaPredicted RBP6.79□□□□□ -1.32
CNOT1-202ENST00000441024 SUCLA2Q9P2R7 463 aaPredicted RBP6.79□□□□□ -1.32
CNOT1-202ENST00000441024 IGSF9BQ9UPX0 1349 aa6.78□□□□□ -1.32
CNOT1-202ENST00000441024 CFAP69A5D8W1 941 aa6.78□□□□□ -1.32
CNOT1-202ENST00000441024 CYP26A1O43174 497 aa6.78□□□□□ -1.32
CNOT1-202ENST00000441024 EXTL3O43909 919 aa6.78□□□□□ -1.32
CNOT1-202ENST00000441024 CHEK2O96017 543 aa6.78□□□□□ -1.32
CNOT1-202ENST00000441024 GH1P01241 217 aa6.78□□□□□ -1.32
CNOT1-202ENST00000441024 GYPCP04921 128 aa6.78□□□□□ -1.32
CNOT1-202ENST00000441024 HOXD10P28358 340 aa6.78□□□□□ -1.32
CNOT1-202ENST00000441024 BCAR1P56945 870 aa6.78□□□□□ -1.32
CNOT1-202ENST00000441024 DRP2Q13474 957 aa6.78□□□□□ -1.32
CNOT1-202ENST00000441024 MYBPC2Q14324 1141 aa6.78□□□□□ -1.32
CNOT1-202ENST00000441024 PIGHQ14442 188 aaPredicted RBP6.78□□□□□ -1.32
CNOT1-202ENST00000441024 EMC2Q15006 297 aa6.78□□□□□ -1.32
CNOT1-202ENST00000441024 SNRNP35Q16560 246 aaKnown RBP6.78□□□□□ -1.32
CNOT1-202ENST00000441024 KLHDC7AQ5VTJ3 777 aa6.78□□□□□ -1.32
CNOT1-202ENST00000441024 IER5Q5VY09 327 aa6.78□□□□□ -1.32
CNOT1-202ENST00000441024 NUGGCQ68CJ6 796 aa6.78□□□□□ -1.32
CNOT1-202ENST00000441024 TWF2Q6IBS0 349 aaKnown RBP6.78□□□□□ -1.32
CNOT1-202ENST00000441024 C4orf22Q6V702 233 aa6.78□□□□□ -1.32
CNOT1-202ENST00000441024 NYAP1Q6ZVC0 841 aa6.78□□□□□ -1.32
CNOT1-202ENST00000441024 PASD1Q8IV76 773 aa6.78□□□□□ -1.32
CNOT1-202ENST00000441024 SCYL3Q8IZE3 742 aa6.78□□□□□ -1.32
CNOT1-202ENST00000441024 RNF25Q96BH1 459 aaPredicted RBP6.78□□□□□ -1.32
CNOT1-202ENST00000441024 IL17RAQ96F46 866 aa6.78□□□□□ -1.32
CNOT1-202ENST00000441024 DNAJC7Q99615 494 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms