RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 ADCY2Q08462 1091 aa4.27□□□□□ -1.73
HMGB3P11-201ENST00000440127 PABPC4Q13310 644 aaKnown RBP eCLIP4.27□□□□□ -1.73
HMGB3P11-201ENST00000440127 TUBA3CQ13748 450 aa4.27□□□□□ -1.73
HMGB3P11-201ENST00000440127 NOLC1Q14978 699 aaKnown RBP eCLIP4.27□□□□□ -1.73
HMGB3P11-201ENST00000440127 CCDC181Q5TID7 509 aa4.27□□□□□ -1.73
HMGB3P11-201ENST00000440127 CDCA2Q69YH5 1023 aaPredicted RBP4.27□□□□□ -1.73
HMGB3P11-201ENST00000440127 FSTL4Q6MZW2 842 aa4.27□□□□□ -1.73
HMGB3P11-201ENST00000440127 TUBA3EQ6PEY2 450 aa4.27□□□□□ -1.73
HMGB3P11-201ENST00000440127 C11orf74Q86VG3 221 aa4.27□□□□□ -1.73
HMGB3P11-201ENST00000440127 THNSL2Q86YJ6 484 aa4.27□□□□□ -1.73
HMGB3P11-201ENST00000440127 GSPT2Q8IYD1 628 aaKnown RBP4.27□□□□□ -1.73
HMGB3P11-201ENST00000440127 AMER2Q8N7J2 671 aa4.27□□□□□ -1.73
HMGB3P11-201ENST00000440127 EFHBQ8N7U6 833 aa4.27□□□□□ -1.73
HMGB3P11-201ENST00000440127 ZNF503Q96F45 646 aa4.27□□□□□ -1.73
HMGB3P11-201ENST00000440127 PLEKHG4BQ96PX9 1271 aa4.27□□□□□ -1.73
HMGB3P11-201ENST00000440127 TCF25Q9BQ70 676 aa4.27□□□□□ -1.73
HMGB3P11-201ENST00000440127 FAM126AQ9BYI3 521 aaPredicted RBP4.27□□□□□ -1.73
HMGB3P11-201ENST00000440127 ZNF703Q9H7S9 590 aaPredicted RBP4.27□□□□□ -1.73
HMGB3P11-201ENST00000440127 TOMM22Q9NS69 142 aa4.27□□□□□ -1.73
HMGB3P11-201ENST00000440127 CHPF2Q9P2E5 772 aa4.27□□□□□ -1.73
HMGB3P11-201ENST00000440127 RBM8AQ9Y5S9 174 aaKnown RBP4.27□□□□□ -1.73
HMGB3P11-201ENST00000440127 TSPOAP1O95153 1857 aa4.26□□□□□ -1.73
HMGB3P11-201ENST00000440127 MAPK8IP3Q9UPT6 1336 aa4.26□□□□□ -1.73
HMGB3P11-201ENST00000440127 KRTAP23-1A1A580 65 aa4.26□□□□□ -1.73
HMGB3P11-201ENST00000440127 NPIPB8E9PQR5 432 aa4.26□□□□□ -1.73
HMGB3P11-201ENST00000440127 MTSS1O43312 755 aa4.26□□□□□ -1.73
HMGB3P11-201ENST00000440127 S100BP04271 92 aaPredicted RBP4.26□□□□□ -1.73
HMGB3P11-201ENST00000440127 CT47B1P0C2W7 299 aaPredicted RBP4.26□□□□□ -1.73
HMGB3P11-201ENST00000440127 VSIG10L2P0DP72 767 aa4.26□□□□□ -1.73
HMGB3P11-201ENST00000440127 XPAP23025 273 aaPredicted RBP4.26□□□□□ -1.73
HMGB3P11-201ENST00000440127 TMPOP42166 694 aaKnown RBP4.26□□□□□ -1.73
HMGB3P11-201ENST00000440127 MAN2A2P49641 1150 aa4.26□□□□□ -1.73
HMGB3P11-201ENST00000440127 CDKN1CP49918 316 aaPredicted RBP4.26□□□□□ -1.73
HMGB3P11-201ENST00000440127 ADCY7P51828 1080 aa4.26□□□□□ -1.73
HMGB3P11-201ENST00000440127 NEK4P51957 841 aa4.26□□□□□ -1.73
HMGB3P11-201ENST00000440127 RARSP54136 660 aaKnown RBP4.26□□□□□ -1.73
HMGB3P11-201ENST00000440127 KIAA1841Q6NSI8 718 aa4.26□□□□□ -1.73
HMGB3P11-201ENST00000440127 Q6ZSN1 163 aa4.26□□□□□ -1.73
HMGB3P11-201ENST00000440127 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.26□□□□□ -1.73
HMGB3P11-201ENST00000440127 ZFPM1Q8IX07 1006 aa4.26□□□□□ -1.73
HMGB3P11-201ENST00000440127 GPR135Q8IZ08 494 aa4.26□□□□□ -1.73
HMGB3P11-201ENST00000440127 ANKRD53Q8N9V6 530 aa4.26□□□□□ -1.73
HMGB3P11-201ENST00000440127 PLA2G15Q8NCC3 412 aa4.26□□□□□ -1.73
HMGB3P11-201ENST00000440127 ZNF483Q8TF39 744 aaPredicted RBP4.26□□□□□ -1.73
HMGB3P11-201ENST00000440127 EXTL1Q92935 676 aa4.26□□□□□ -1.73
HMGB3P11-201ENST00000440127 FERMT2Q96AC1 680 aa4.26□□□□□ -1.73
HMGB3P11-201ENST00000440127 TMEM176AQ96HP8 235 aa4.26□□□□□ -1.73
HMGB3P11-201ENST00000440127 C16orf92Q96LL3 132 aa4.26□□□□□ -1.73
HMGB3P11-201ENST00000440127 UIMC1Q96RL1 719 aa4.26□□□□□ -1.73
HMGB3P11-201ENST00000440127 PLEKHF1Q96S99 279 aa4.26□□□□□ -1.73
HMGB3P11-201ENST00000440127 OSBPL6Q9BZF3 934 aa4.26□□□□□ -1.73
HMGB3P11-201ENST00000440127 SCAND2PQ9GZW5 306 aaPredicted RBP4.26□□□□□ -1.73
HMGB3P11-201ENST00000440127 PCED1AQ9H1Q7 454 aa4.26□□□□□ -1.73
HMGB3P11-201ENST00000440127 SLITRK6Q9H5Y7 841 aa4.26□□□□□ -1.73
HMGB3P11-201ENST00000440127 IL23AQ9NPF7 189 aa4.26□□□□□ -1.73
HMGB3P11-201ENST00000440127 FAM135BQ49AJ0 1406 aa4.26□□□□□ -1.73
HMGB3P11-201ENST00000440127 METP08581 1390 aa4.26□□□□□ -1.73
HMGB3P11-201ENST00000440127 PNPLA6Q8IY17 1366 aa4.26□□□□□ -1.73
HMGB3P11-201ENST00000440127 TMEM2Q9UHN6 1383 aa4.26□□□□□ -1.73
HMGB3P11-201ENST00000440127 IL16Q14005 1332 aa4.25□□□□□ -1.73
HMGB3P11-201ENST00000440127 ATP7BP35670 1465 aa4.25□□□□□ -1.73
HMGB3P11-201ENST00000440127 IQSEC2Q5JU85 1478 aa4.25□□□□□ -1.73
HMGB3P11-201ENST00000440127 A0A087X0B3 334 aa4.25□□□□□ -1.73
HMGB3P11-201ENST00000440127 GOLGA6L6A8MZA4 724 aa4.25□□□□□ -1.73
HMGB3P11-201ENST00000440127 TRAF5O00463 557 aa4.25□□□□□ -1.73
HMGB3P11-201ENST00000440127 MFAP3LO75121 409 aa4.25□□□□□ -1.73
HMGB3P11-201ENST00000440127 APOL3O95236 402 aa4.25□□□□□ -1.73
HMGB3P11-201ENST00000440127 STAT3P40763 770 aa4.25□□□□□ -1.73
HMGB3P11-201ENST00000440127 NPEPPSP55786 919 aa4.25□□□□□ -1.73
HMGB3P11-201ENST00000440127 NRG3P56975 720 aa4.25□□□□□ -1.73
HMGB3P11-201ENST00000440127 RIPK4P57078 832 aa4.25□□□□□ -1.73
HMGB3P11-201ENST00000440127 ATP2C1P98194 919 aaPredicted RBP4.25□□□□□ -1.73
HMGB3P11-201ENST00000440127 FHL2Q14192 279 aa4.25□□□□□ -1.73
HMGB3P11-201ENST00000440127 LRRC32Q14392 662 aa4.25□□□□□ -1.73
HMGB3P11-201ENST00000440127 ZNF460Q14592 562 aa4.25□□□□□ -1.73
HMGB3P11-201ENST00000440127 CCDC178Q5BJE1 867 aa4.25□□□□□ -1.73
HMGB3P11-201ENST00000440127 GPR158Q5T848 1215 aa4.25□□□□□ -1.73
HMGB3P11-201ENST00000440127 FAM111BQ6SJ93 734 aa4.25□□□□□ -1.73
HMGB3P11-201ENST00000440127 ESPNLQ6ZVH7 1005 aa4.25□□□□□ -1.73
HMGB3P11-201ENST00000440127 CLEC14AQ86T13 490 aa4.25□□□□□ -1.73
HMGB3P11-201ENST00000440127 TMPRSS6Q8IU80 811 aa4.25□□□□□ -1.73
HMGB3P11-201ENST00000440127 Q8N1X5 172 aa4.25□□□□□ -1.73
HMGB3P11-201ENST00000440127 PRPF38AQ8NAV1 312 aaKnown RBP4.25□□□□□ -1.73
HMGB3P11-201ENST00000440127 CACTINQ8WUQ7 758 aaKnown RBP4.25□□□□□ -1.73
HMGB3P11-201ENST00000440127 RSAD2Q8WXG1 361 aa4.25□□□□□ -1.73
HMGB3P11-201ENST00000440127 FRAT1Q92837 279 aaPredicted RBP4.25□□□□□ -1.73
HMGB3P11-201ENST00000440127 NINJ1Q92982 152 aa4.25□□□□□ -1.73
HMGB3P11-201ENST00000440127 MFSD3Q96ES6 412 aa4.25□□□□□ -1.73
HMGB3P11-201ENST00000440127 CLUHP3Q96NS8 147 aa4.25□□□□□ -1.73
HMGB3P11-201ENST00000440127 PITHD1Q9GZP4 211 aaPredicted RBP4.25□□□□□ -1.73
HMGB3P11-201ENST00000440127 HAPLN2Q9GZV7 340 aa4.25□□□□□ -1.73
HMGB3P11-201ENST00000440127 WNT8AQ9H1J5 351 aa4.25□□□□□ -1.73
HMGB3P11-201ENST00000440127 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.25□□□□□ -1.73
HMGB3P11-201ENST00000440127 POLKQ9UBT6 870 aa4.25□□□□□ -1.73
HMGB3P11-201ENST00000440127 EID1Q9Y6B2 187 aa4.25□□□□□ -1.73
HMGB3P11-201ENST00000440127 SHPRHQ149N8 1683 aa4.25□□□□□ -1.73
HMGB3P11-201ENST00000440127 COL3A1P02461 1466 aaPredicted RBP4.24□□□□□ -1.73
HMGB3P11-201ENST00000440127 NLRP1Q9C000 1473 aa4.24□□□□□ -1.73
HMGB3P11-201ENST00000440127 TECPR2O15040 1411 aa4.24□□□□□ -1.73
HMGB3P11-201ENST00000440127 CPSF1Q10570 1443 aaKnown RBP4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms