RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 PDILTQ8N807 584 aa25.94■■□□□ 1.74
VARS-217ENST00000440048 KCNG4Q8TDN1 519 aa25.94■■□□□ 1.74
VARS-217ENST00000440048 KCNN1Q92952 543 aa25.94■■□□□ 1.74
VARS-217ENST00000440048 VN1R3Q9BXE9 311 aa25.94■■□□□ 1.74
VARS-217ENST00000440048 CXCL16Q9H2A7 254 aa25.94■■□□□ 1.74
VARS-217ENST00000440048 CFAP45Q9UL16 551 aa25.94■■□□□ 1.74
VARS-217ENST00000440048 PRG3Q9Y2Y8 225 aaPredicted RBP25.94■■□□□ 1.74
VARS-217ENST00000440048 MYMKA6NI61 221 aa25.93■■□□□ 1.74
VARS-217ENST00000440048 ABLIM1O14639 778 aa25.93■■□□□ 1.74
VARS-217ENST00000440048 DLX2Q07687 328 aaPredicted RBP25.93■■□□□ 1.74
VARS-217ENST00000440048 BECN1Q14457 450 aa25.93■■□□□ 1.74
VARS-217ENST00000440048 SMC1AQ14683 1233 aaKnown RBP25.93■■□□□ 1.74
VARS-217ENST00000440048 AXDND1Q5T1B0 1012 aaPredicted RBP25.93■■□□□ 1.74
VARS-217ENST00000440048 MPZL3Q6UWV2 235 aa25.93■■□□□ 1.74
VARS-217ENST00000440048 ZBTB45Q96K62 511 aaPredicted RBP25.93■■□□□ 1.74
VARS-217ENST00000440048 TCHPQ9BT92 498 aa25.93■■□□□ 1.74
VARS-217ENST00000440048 ZBP1Q9H171 429 aa25.93■■□□□ 1.74
VARS-217ENST00000440048 MARCH5Q9NX47 278 aa25.93■■□□□ 1.74
VARS-217ENST00000440048 K7ENM7 598 aa25.92■■□□□ 1.74
VARS-217ENST00000440048 PTGESO14684 152 aa25.92■■□□□ 1.74
VARS-217ENST00000440048 TRAK2O60296 914 aa25.92■■□□□ 1.74
VARS-217ENST00000440048 MCF2P10911 925 aa25.92■■□□□ 1.74
VARS-217ENST00000440048 GRM5P41594 1212 aa25.92■■□□□ 1.74
VARS-217ENST00000440048 DUSP6Q16828 381 aa25.92■■□□□ 1.74
VARS-217ENST00000440048 SHC4Q6S5L8 630 aa25.92■■□□□ 1.74
VARS-217ENST00000440048 ZPBP2Q6X784 338 aa25.92■■□□□ 1.74
VARS-217ENST00000440048 CEP120Q8N960 986 aa25.92■■□□□ 1.74
VARS-217ENST00000440048 MRPL43Q8N983 215 aaKnown RBP25.92■■□□□ 1.74
VARS-217ENST00000440048 GADD45GIP1Q8TAE8 222 aaPredicted RBP25.92■■□□□ 1.74
VARS-217ENST00000440048 DDX12PQ92771 950 aa25.92■■□□□ 1.74
VARS-217ENST00000440048 FIZ1Q96SL8 496 aa25.92■■□□□ 1.74
VARS-217ENST00000440048 TBX10O75333 385 aa25.91■■□□□ 1.74
VARS-217ENST00000440048 TOM1L1O75674 476 aa25.91■■□□□ 1.74
VARS-217ENST00000440048 CXCL14O95715 111 aa25.91■■□□□ 1.74
VARS-217ENST00000440048 PUS10Q3MIT2 529 aaKnown RBP25.91■■□□□ 1.74
VARS-217ENST00000440048 FAM178BQ8IXR5 827 aa25.91■■□□□ 1.74
VARS-217ENST00000440048 DNAJC19Q96DA6 116 aa25.91■■□□□ 1.74
VARS-217ENST00000440048 CDCA3Q99618 268 aaPredicted RBP25.91■■□□□ 1.74
VARS-217ENST00000440048 RCOR1Q9UKL0 485 aa25.91■■□□□ 1.74
VARS-217ENST00000440048 PCDHA7Q9UN72 937 aa25.91■■□□□ 1.74
VARS-217ENST00000440048 CITO14578 2027 aa25.91■■□□□ 1.74
VARS-217ENST00000440048 C2orf71A6NGG8 1288 aa25.9■■□□□ 1.74
VARS-217ENST00000440048 F8W810 466 aa25.9■■□□□ 1.74
VARS-217ENST00000440048 NR1I2O75469 434 aa25.9■■□□□ 1.74
VARS-217ENST00000440048 GLP2RO95838 553 aa25.9■■□□□ 1.74
VARS-217ENST00000440048 THP07101 528 aa25.9■■□□□ 1.74
VARS-217ENST00000440048 CTSAP10619 480 aa25.9■■□□□ 1.74
VARS-217ENST00000440048 SCP2P22307 547 aa25.9■■□□□ 1.74
VARS-217ENST00000440048 NMT1P30419 496 aaKnown RBP25.9■■□□□ 1.74
VARS-217ENST00000440048 ME1P48163 572 aa25.9■■□□□ 1.74
VARS-217ENST00000440048 OSTNP61366 133 aa25.9■■□□□ 1.74
VARS-217ENST00000440048 BMS1Q14692 1282 aaKnown RBP25.9■■□□□ 1.74
VARS-217ENST00000440048 AUTS2Q8WXX7 1259 aa25.9■■□□□ 1.74
VARS-217ENST00000440048 CCDC94Q9BW85 323 aaPredicted RBP25.9■■□□□ 1.74
VARS-217ENST00000440048 ANKFY1Q9P2R3 1169 aa25.9■■□□□ 1.74
VARS-217ENST00000440048 TBX20Q9UMR3 447 aa25.9■■□□□ 1.74
VARS-217ENST00000440048 HARSP12081 509 aaKnown RBP25.89■■□□□ 1.74
VARS-217ENST00000440048 CA8P35219 290 aa25.89■■□□□ 1.74
VARS-217ENST00000440048 NDUFV1P49821 464 aa25.89■■□□□ 1.74
VARS-217ENST00000440048 TUSC3Q13454 348 aa25.89■■□□□ 1.74
VARS-217ENST00000440048 E2F4Q16254 413 aa25.89■■□□□ 1.74
VARS-217ENST00000440048 VN1R2Q8NFZ6 395 aa25.89■■□□□ 1.74
VARS-217ENST00000440048 BICD1Q96G01 975 aa25.89■■□□□ 1.74
VARS-217ENST00000440048 COLEC11Q9BWP8 271 aa25.89■■□□□ 1.74
VARS-217ENST00000440048 CACNG4Q9UBN1 327 aa25.89■■□□□ 1.74
VARS-217ENST00000440048 STK39Q9UEW8 545 aa25.89■■□□□ 1.74
VARS-217ENST00000440048 TCHHQ07283 1943 aa25.88■■□□□ 1.73
VARS-217ENST00000440048 FSD2A1L4K1 749 aa25.88■■□□□ 1.73
VARS-217ENST00000440048 RBM10P98175 930 aaKnown RBP25.88■■□□□ 1.73
VARS-217ENST00000440048 GTF2BQ00403 316 aa25.88■■□□□ 1.73
VARS-217ENST00000440048 NOLC1Q14978 699 aaKnown RBP eCLIP25.88■■□□□ 1.73
VARS-217ENST00000440048 NAB2Q15742 525 aa25.88■■□□□ 1.73
VARS-217ENST00000440048 PTCRAQ6ISU1 281 aaPredicted RBP25.88■■□□□ 1.73
VARS-217ENST00000440048 SFR1Q86XK3 245 aa25.88■■□□□ 1.73
VARS-217ENST00000440048 RABGGTAQ92696 567 aa25.88■■□□□ 1.73
VARS-217ENST00000440048 CHAMP1Q96JM3 812 aa25.88■■□□□ 1.73
VARS-217ENST00000440048 CLEC1BQ9P126 229 aa25.88■■□□□ 1.73
VARS-217ENST00000440048 IRAK3Q9Y616 596 aa25.88■■□□□ 1.73
VARS-217ENST00000440048 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP25.87■■□□□ 1.73
VARS-217ENST00000440048 CLDN3O15551 220 aa25.87■■□□□ 1.73
VARS-217ENST00000440048 EFEMP2O95967 443 aa25.87■■□□□ 1.73
VARS-217ENST00000440048 YARSP54577 528 aaKnown RBP25.87■■□□□ 1.73
VARS-217ENST00000440048 MCL1Q07820 350 aa25.87■■□□□ 1.73
VARS-217ENST00000440048 KCNC3Q14003 757 aa25.87■■□□□ 1.73
VARS-217ENST00000440048 CLUL1Q15846 466 aa25.87■■□□□ 1.73
VARS-217ENST00000440048 DHX58Q96C10 678 aa25.87■■□□□ 1.73
VARS-217ENST00000440048 MSLNLQ96KJ4 702 aa25.87■■□□□ 1.73
VARS-217ENST00000440048 ACAP3Q96P50 834 aa25.87■■□□□ 1.73
VARS-217ENST00000440048 NECAB3Q96P71 396 aaPredicted RBP25.87■■□□□ 1.73
VARS-217ENST00000440048 PAAF1Q9BRP4 392 aa25.87■■□□□ 1.73
VARS-217ENST00000440048 HAPLN2Q9GZV7 340 aa25.87■■□□□ 1.73
VARS-217ENST00000440048 ST6GALNAC4Q9H4F1 302 aa25.87■■□□□ 1.73
VARS-217ENST00000440048 TOPORSQ9NS56 1045 aaPredicted RBP25.87■■□□□ 1.73
VARS-217ENST00000440048 BARX2Q9UMQ3 279 aaPredicted RBP25.87■■□□□ 1.73
VARS-217ENST00000440048 GRXCR2A6NFK2 248 aa25.86■■□□□ 1.73
VARS-217ENST00000440048 CASTOR2A6NHX0 329 aa25.86■■□□□ 1.73
VARS-217ENST00000440048 PIGRP01833 764 aa25.86■■□□□ 1.73
VARS-217ENST00000440048 SOD2P04179 222 aa25.86■■□□□ 1.73
VARS-217ENST00000440048 GAP43P17677 238 aa25.86■■□□□ 1.73
VARS-217ENST00000440048 ABCD1P33897 745 aa25.86■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms