RNA–Protein interactions for RNA: ENST00000439518.5

NCKIPSD-206, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 1 (best)

Gene NCKIPSD, Length 1,214 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-206ENST00000439518 NPTX2P47972 431 aa22.37■■□□□ 1.17
NCKIPSD-206ENST00000439518 TUSC3Q13454 348 aa22.37■■□□□ 1.17
NCKIPSD-206ENST00000439518 NAB2Q15742 525 aa22.37■■□□□ 1.17
NCKIPSD-206ENST00000439518 HYIQ5T013 277 aa22.37■■□□□ 1.17
NCKIPSD-206ENST00000439518 ATF7IP2Q5U623 682 aa22.37■■□□□ 1.17
NCKIPSD-206ENST00000439518 RINT1Q6NUQ1 792 aa22.37■■□□□ 1.17
NCKIPSD-206ENST00000439518 FUT10Q6P4F1 479 aa22.37■■□□□ 1.17
NCKIPSD-206ENST00000439518 C1orf186Q6ZWK4 172 aa22.37■■□□□ 1.17
NCKIPSD-206ENST00000439518 PAAF1Q9BRP4 392 aa22.37■■□□□ 1.17
NCKIPSD-206ENST00000439518 RUSC1Q9BVN2 902 aa22.37■■□□□ 1.17
NCKIPSD-206ENST00000439518 CACNG4Q9UBN1 327 aa22.37■■□□□ 1.17
NCKIPSD-206ENST00000439518 SMC3Q9UQE7 1217 aa22.37■■□□□ 1.17
NCKIPSD-206ENST00000439518 K7ERI5 159 aa22.36■■□□□ 1.17
NCKIPSD-206ENST00000439518 HIP1RO75146 1068 aa22.36■■□□□ 1.17
NCKIPSD-206ENST00000439518 MAPK7Q13164 816 aa22.36■■□□□ 1.17
NCKIPSD-206ENST00000439518 HSP90AA2PQ14568 343 aaPredicted RBP22.36■■□□□ 1.17
NCKIPSD-206ENST00000439518 USP41Q3LFD5 358 aa22.36■■□□□ 1.17
NCKIPSD-206ENST00000439518 DCAF4L1Q3SXM0 396 aa22.36■■□□□ 1.17
NCKIPSD-206ENST00000439518 B3GALT6Q96L58 329 aa22.36■■□□□ 1.17
NCKIPSD-206ENST00000439518 MFSD14AQ96MC6 490 aa22.36■■□□□ 1.17
NCKIPSD-206ENST00000439518 TNFSF13BQ9Y275 285 aa22.36■■□□□ 1.17
NCKIPSD-206ENST00000439518 USTQ9Y2C2 406 aa22.36■■□□□ 1.17
NCKIPSD-206ENST00000439518 PIEZO1Q92508 2521 aa22.36■■□□□ 1.17
NCKIPSD-206ENST00000439518 TADA2AO75478 443 aa22.35■■□□□ 1.17
NCKIPSD-206ENST00000439518 C1RP00736 705 aa22.35■■□□□ 1.17
NCKIPSD-206ENST00000439518 THP07101 528 aa22.35■■□□□ 1.17
NCKIPSD-206ENST00000439518 PEX3P56589 373 aa22.35■■□□□ 1.17
NCKIPSD-206ENST00000439518 SIGLEC14Q08ET2 396 aa22.35■■□□□ 1.17
NCKIPSD-206ENST00000439518 ARL6IP4Q66PJ3 421 aaKnown RBP22.35■■□□□ 1.17
NCKIPSD-206ENST00000439518 C15orf39Q6ZRI6 1047 aa22.35■■□□□ 1.17
NCKIPSD-206ENST00000439518 KCTD17Q8N5Z5 321 aa22.35■■□□□ 1.17
NCKIPSD-206ENST00000439518 DRC1Q96MC2 740 aa22.35■■□□□ 1.17
NCKIPSD-206ENST00000439518 PNMA5Q96PV4 448 aa22.35■■□□□ 1.17
NCKIPSD-206ENST00000439518 TMEM134Q9H6X4 195 aa22.35■■□□□ 1.17
NCKIPSD-206ENST00000439518 ARHGAP28Q9P2N2 729 aa22.35■■□□□ 1.17
NCKIPSD-206ENST00000439518 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.35■■□□□ 1.17
NCKIPSD-206ENST00000439518 PHLPP2Q6ZVD8 1323 aa22.34■■□□□ 1.17
NCKIPSD-206ENST00000439518 CCDC169A6NNP5 214 aa22.34■■□□□ 1.17
NCKIPSD-206ENST00000439518 GUCY2CP25092 1073 aa22.34■■□□□ 1.17
NCKIPSD-206ENST00000439518 TAS1R3Q7RTX0 852 aa22.34■■□□□ 1.17
NCKIPSD-206ENST00000439518 ZDHHC14Q8IZN3 488 aa22.34■■□□□ 1.17
NCKIPSD-206ENST00000439518 CMASQ8NFW8 434 aaPredicted RBP22.34■■□□□ 1.17
NCKIPSD-206ENST00000439518 PBXIP1Q96AQ6 731 aa22.34■■□□□ 1.17
NCKIPSD-206ENST00000439518 ASIC4Q96FT7 647 aa22.34■■□□□ 1.17
NCKIPSD-206ENST00000439518 NTPCRQ9BSD7 190 aaKnown RBP22.34■■□□□ 1.17
NCKIPSD-206ENST00000439518 TIPINQ9BVW5 301 aa22.34■■□□□ 1.17
NCKIPSD-206ENST00000439518 C17orf75Q9HAS0 396 aa22.34■■□□□ 1.17
NCKIPSD-206ENST00000439518 PTPRHQ9HD43 1115 aa22.34■■□□□ 1.17
NCKIPSD-206ENST00000439518 MAN1C1Q9NR34 630 aa22.34■■□□□ 1.17
NCKIPSD-206ENST00000439518 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP22.34■■□□□ 1.17
NCKIPSD-206ENST00000439518 FNIP2Q9P278 1114 aa22.34■■□□□ 1.17
NCKIPSD-206ENST00000439518 GDAQ9Y2T3 454 aa22.34■■□□□ 1.17
NCKIPSD-206ENST00000439518 RBM19Q9Y4C8 960 aaKnown RBP22.34■■□□□ 1.17
NCKIPSD-206ENST00000439518 SF3B1O75533 1304 aaKnown RBP eCLIP22.33■■□□□ 1.171e-8■■■■■ 103.4
NCKIPSD-206ENST00000439518 VWA3AA6NCI4 1184 aa22.33■■□□□ 1.17
NCKIPSD-206ENST00000439518 CASTOR2A6NHX0 329 aa22.33■■□□□ 1.17
NCKIPSD-206ENST00000439518 KIF4AO95239 1232 aa22.33■■□□□ 1.17
NCKIPSD-206ENST00000439518 GLUD1P00367 558 aa22.33■■□□□ 1.17
NCKIPSD-206ENST00000439518 DMP1Q13316 513 aaPredicted RBP22.33■■□□□ 1.17
NCKIPSD-206ENST00000439518 LARP1BQ659C4 914 aaKnown RBP22.33■■□□□ 1.17
NCKIPSD-206ENST00000439518 TDRD5Q8NAT2 981 aaKnown RBP22.33■■□□□ 1.17
NCKIPSD-206ENST00000439518 KREMEN2Q8NCW0 462 aa22.33■■□□□ 1.17
NCKIPSD-206ENST00000439518 RIN2Q8WYP3 895 aaPredicted RBP22.33■■□□□ 1.17
NCKIPSD-206ENST00000439518 ACO2Q99798 780 aaKnown RBP22.33■■□□□ 1.17
NCKIPSD-206ENST00000439518 RHOBTB2Q9BYZ6 727 aa22.33■■□□□ 1.17
NCKIPSD-206ENST00000439518 KCNH6Q9H252 994 aa22.33■■□□□ 1.17
NCKIPSD-206ENST00000439518 DPP7Q9UHL4 492 aa22.33■■□□□ 1.17
NCKIPSD-206ENST00000439518 MYO10Q9HD67 2058 aa22.33■■□□□ 1.17
NCKIPSD-206ENST00000439518 SPDYE4A6NLX3 237 aa22.32■■□□□ 1.16
NCKIPSD-206ENST00000439518 PAPLNO95428 1278 aa22.32■■□□□ 1.16
NCKIPSD-206ENST00000439518 ZRSR1Q15695 479 aaKnown RBP22.32■■□□□ 1.16
NCKIPSD-206ENST00000439518 LILRA6Q6PI73 481 aa22.32■■□□□ 1.16
NCKIPSD-206ENST00000439518 APBB1IPQ7Z5R6 666 aaPredicted RBP22.32■■□□□ 1.16
NCKIPSD-206ENST00000439518 ZBTB33Q86T24 672 aa22.32■■□□□ 1.16
NCKIPSD-206ENST00000439518 PLCD3Q8N3E9 789 aa22.32■■□□□ 1.16
NCKIPSD-206ENST00000439518 SYT2Q8N9I0 419 aaPredicted RBP22.32■■□□□ 1.16
NCKIPSD-206ENST00000439518 HDAC7Q8WUI4 952 aa22.32■■□□□ 1.16
NCKIPSD-206ENST00000439518 PPP1R10Q96QC0 940 aaKnown RBP22.32■■□□□ 1.16
NCKIPSD-206ENST00000439518 NT5C3AQ9H0P0 336 aa22.32■■□□□ 1.16
NCKIPSD-206ENST00000439518 KMT5AQ9NQR1 393 aa22.32■■□□□ 1.16
NCKIPSD-206ENST00000439518 SORCS3Q9UPU3 1222 aa22.32■■□□□ 1.16
NCKIPSD-206ENST00000439518 PLXNA3P51805 1871 aa22.32■■□□□ 1.16
NCKIPSD-206ENST00000439518 DENND4AQ7Z401 1863 aa22.32■■□□□ 1.16
NCKIPSD-206ENST00000439518 SFI1A8K8P3 1242 aa22.31■■□□□ 1.16
NCKIPSD-206ENST00000439518 SLC12A3P55017 1021 aa22.31■■□□□ 1.16
NCKIPSD-206ENST00000439518 CREMQ03060 361 aa22.31■■□□□ 1.16
NCKIPSD-206ENST00000439518 CUL4AQ13619 759 aa22.31■■□□□ 1.16
NCKIPSD-206ENST00000439518 TMEM119Q4V9L6 283 aa22.31■■□□□ 1.16
NCKIPSD-206ENST00000439518 RTP2Q5QGT7 225 aa22.31■■□□□ 1.16
NCKIPSD-206ENST00000439518 ELMSAN1Q6PJG2 1045 aa22.31■■□□□ 1.16
NCKIPSD-206ENST00000439518 CYP26C1Q6V0L0 522 aa22.31■■□□□ 1.16
NCKIPSD-206ENST00000439518 PALB2Q86YC2 1186 aa22.31■■□□□ 1.16
NCKIPSD-206ENST00000439518 HASPINQ8TF76 798 aa22.31■■□□□ 1.16
NCKIPSD-206ENST00000439518 SPIRE2Q8WWL2 714 aa22.31■■□□□ 1.16
NCKIPSD-206ENST00000439518 PLIN2Q99541 437 aa22.31■■□□□ 1.16
NCKIPSD-206ENST00000439518 TARS2Q9BW92 718 aaKnown RBP22.31■■□□□ 1.16
NCKIPSD-206ENST00000439518 MRPL4Q9BYD3 311 aaKnown RBP22.31■■□□□ 1.16
NCKIPSD-206ENST00000439518 CDT1Q9H211 546 aa22.31■■□□□ 1.16
NCKIPSD-206ENST00000439518 PLEKHA4Q9H4M7 779 aa22.31■■□□□ 1.16
NCKIPSD-206ENST00000439518 WDFY4Q6ZS81 3184 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms