RNA–Protein interactions for RNA: ENST00000439487.5

SEMA3B-206, Transcript of semaphorin 3B, humanhuman

TSL 3

Gene SEMA3B, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-206ENST00000439487 PCDHB13Q9Y5F0 798 aa21.32■■□□□ 1
SEMA3B-206ENST00000439487 PCDHB12Q9Y5F1 795 aa21.32■■□□□ 1
SEMA3B-206ENST00000439487 ANK1P16157 1881 aa21.32■■□□□ 1
SEMA3B-206ENST00000439487 PVALEFA0A1B0GWK0 134 aa21.31■■□□□ 1
SEMA3B-206ENST00000439487 ANKRD63C9JTQ0 380 aa21.31■■□□□ 1
SEMA3B-206ENST00000439487 INPPL1O15357 1258 aa21.31■■□□□ 1
SEMA3B-206ENST00000439487 CLDN3O15551 220 aa21.31■■□□□ 1
SEMA3B-206ENST00000439487 KLRC4O43908 158 aa21.31■■□□□ 1
SEMA3B-206ENST00000439487 B4GALT3O60512 393 aa21.31■■□□□ 1
SEMA3B-206ENST00000439487 PRPF6O94906 941 aaKnown RBP21.31■■□□□ 1
SEMA3B-206ENST00000439487 GRM5P41594 1212 aa21.31■■□□□ 1
SEMA3B-206ENST00000439487 NOLC1Q14978 699 aaKnown RBP eCLIP21.31■■□□□ 1
SEMA3B-206ENST00000439487 L1TD1Q5T7N2 865 aaKnown RBP21.31■■□□□ 1
SEMA3B-206ENST00000439487 SLC39A4Q6P5W5 647 aa21.31■■□□□ 1
SEMA3B-206ENST00000439487 KCNT2Q6UVM3 1135 aa21.31■■□□□ 1
SEMA3B-206ENST00000439487 GSTCDQ8NEC7 633 aa21.31■■□□□ 1
SEMA3B-206ENST00000439487 ENGASEQ8NFI3 743 aa21.31■■□□□ 1
SEMA3B-206ENST00000439487 ACCSQ96QU6 501 aa21.31■■□□□ 1
SEMA3B-206ENST00000439487 KANSL3Q9P2N6 904 aa21.31■■□□□ 1
SEMA3B-206ENST00000439487 TISP43B9A030 160 aa21.3■■□□□ 1
SEMA3B-206ENST00000439487 ZC3H11AO75152 810 aaKnown RBP eCLIP21.3■■□□□ 1
SEMA3B-206ENST00000439487 DDHD2O94830 711 aa21.3■■□□□ 1
SEMA3B-206ENST00000439487 ITGB1P05556 798 aa21.3■■□□□ 1
SEMA3B-206ENST00000439487 BCAR1P56945 870 aa21.3■■□□□ 1
SEMA3B-206ENST00000439487 FAM160A1Q05DH4 1040 aa21.3■■□□□ 1
SEMA3B-206ENST00000439487 MCL1Q07820 350 aa21.3■■□□□ 1
SEMA3B-206ENST00000439487 EHHADHQ08426 723 aa21.3■■□□□ 1
SEMA3B-206ENST00000439487 SNW1Q13573 536 aaKnown RBP21.3■■□□□ 1
SEMA3B-206ENST00000439487 SEZ6Q53EL9 994 aa21.3■■□□□ 1
SEMA3B-206ENST00000439487 FAM26FQ5R3K3 315 aa21.3■■□□□ 1
SEMA3B-206ENST00000439487 TMEM87AQ8NBN3 555 aa21.3■■□□□ 1
SEMA3B-206ENST00000439487 P2RX5Q93086 422 aa21.3■■□□□ 1
SEMA3B-206ENST00000439487 ZNF558Q96NG5 402 aa21.3■■□□□ 1
SEMA3B-206ENST00000439487 FAM193BQ96PV7 902 aaPredicted RBP21.3■■□□□ 1
SEMA3B-206ENST00000439487 C11orf84Q9BUA3 381 aaPredicted RBP21.3■■□□□ 1
SEMA3B-206ENST00000439487 CCDC94Q9BW85 323 aaPredicted RBP21.3■■□□□ 1
SEMA3B-206ENST00000439487 ALG13Q9NP73 1137 aaKnown RBP21.3■■□□□ 1
SEMA3B-206ENST00000439487 DNAJB4Q9UDY4 337 aa21.3■■□□□ 1
SEMA3B-206ENST00000439487 PLAGL2Q9UPG8 496 aa21.3■■□□□ 1
SEMA3B-206ENST00000439487 NT5C1B-RDH14C9J2C7 533 aa21.29■■□□□ 1
SEMA3B-206ENST00000439487 GRM6O15303 877 aa21.29■■□□□ 1
SEMA3B-206ENST00000439487 ALCAMQ13740 583 aa21.29■■□□□ 1
SEMA3B-206ENST00000439487 RPS6KC1Q96S38 1066 aa21.29■■□□□ 1
SEMA3B-206ENST00000439487 EXOC7Q9UPT5 735 aa21.29■■□□□ 1
SEMA3B-206ENST00000439487 STXBP5LQ9Y2K9 1186 aa21.29■■□□□ 1
SEMA3B-206ENST00000439487 ZMYM2Q9UBW7 1377 aa21.28■■□□□ 1
SEMA3B-206ENST00000439487 MYL1P05976 194 aa21.28■■□□□ 1
SEMA3B-206ENST00000439487 KMT5BQ4FZB7 885 aa21.28■■□□□ 1
SEMA3B-206ENST00000439487 SYCP3Q8IZU3 236 aa21.28■■□□□ 1
SEMA3B-206ENST00000439487 SPPL3Q8TCT6 385 aa21.28■■□□□ 1
SEMA3B-206ENST00000439487 ACAP3Q96P50 834 aa21.28■■□□□ 1
SEMA3B-206ENST00000439487 SLC39A2Q9NP94 309 aa21.28■■□□□ 1
SEMA3B-206ENST00000439487 MTCH2Q9Y6C9 303 aa21.28■■□□□ 1
SEMA3B-206ENST00000439487 BRWD1Q9NSI6 2320 aa21.27■■□□□ 1
SEMA3B-206ENST00000439487 A0A0B4J269 797 aa21.27■■□□□ 1
SEMA3B-206ENST00000439487 PTGESO14684 152 aa21.27■■□□□ 1
SEMA3B-206ENST00000439487 NR1I2O75469 434 aa21.27■■□□□ 1
SEMA3B-206ENST00000439487 FGF18O76093 207 aa21.27■■□□□ 1
SEMA3B-206ENST00000439487 CSPG5O95196 566 aa21.27■■□□□ 1
SEMA3B-206ENST00000439487 RPN1P04843 607 aaKnown RBP21.27■■□□□ 1
SEMA3B-206ENST00000439487 GALTP07902 379 aa21.27■■□□□ 1
SEMA3B-206ENST00000439487 POU3F3P20264 500 aaPredicted RBP21.27■■□□□ 1
SEMA3B-206ENST00000439487 SLC11A1P49279 550 aa21.27■■□□□ 1
SEMA3B-206ENST00000439487 ALDH7A1P49419 539 aaKnown RBP21.27■■□□□ 1
SEMA3B-206ENST00000439487 YARSP54577 528 aaKnown RBP21.27■■□□□ 1
SEMA3B-206ENST00000439487 DPYDQ12882 1025 aa21.27■■□□□ 1
SEMA3B-206ENST00000439487 KANK3Q6NY19 840 aa21.27■■□□□ 1
SEMA3B-206ENST00000439487 STXBP4Q6ZWJ1 553 aa21.27■■□□□ 1
SEMA3B-206ENST00000439487 EPM2AIP1Q7L775 607 aaPredicted RBP21.27■■□□□ 1
SEMA3B-206ENST00000439487 COLGALT2Q8IYK4 626 aa21.27■■□□□ 1
SEMA3B-206ENST00000439487 MICALL1Q8N3F8 863 aa21.27■■□□□ 1
SEMA3B-206ENST00000439487 MSTO1Q9BUK6 570 aa21.27■■□□□ 1
SEMA3B-206ENST00000439487 EXOC1Q9NV70 894 aa21.27■■□□□ 1
SEMA3B-206ENST00000439487 SPG21Q9NZD8 308 aa21.27■■□□□ 1
SEMA3B-206ENST00000439487 REV3LO60673 3130 aa21.27■■□□□ 1
SEMA3B-206ENST00000439487 PRPF40AO75400 957 aaKnown RBP21.26■□□□□ 0.99
SEMA3B-206ENST00000439487 DNAJB1P25685 340 aa21.26■□□□□ 0.99
SEMA3B-206ENST00000439487 TNFSF9P41273 254 aa21.26■□□□□ 0.99
SEMA3B-206ENST00000439487 DSC1Q08554 894 aa21.26■□□□□ 0.99
SEMA3B-206ENST00000439487 GRIK3Q13003 919 aa21.26■□□□□ 0.99
SEMA3B-206ENST00000439487 GLRA4Q5JXX5 417 aa21.26■□□□□ 0.99
SEMA3B-206ENST00000439487 ZBTB41Q5SVQ8 909 aa21.26■□□□□ 0.99
SEMA3B-206ENST00000439487 SLFN12LQ6IEE8 588 aa21.26■□□□□ 0.99
SEMA3B-206ENST00000439487 SLC39A11Q8N1S5 342 aa21.26■□□□□ 0.99
SEMA3B-206ENST00000439487 ZNF507Q8TCN5 953 aa21.26■□□□□ 0.99
SEMA3B-206ENST00000439487 POF1BQ8WVV4 589 aa21.26■□□□□ 0.99
SEMA3B-206ENST00000439487 TMEM175Q9BSA9 504 aa21.26■□□□□ 0.99
SEMA3B-206ENST00000439487 TMEM206Q9H813 350 aa21.26■□□□□ 0.99
SEMA3B-206ENST00000439487 STYXL1Q9Y6J8 313 aa21.26■□□□□ 0.99
SEMA3B-206ENST00000439487 OGTO15294 1046 aa21.25■□□□□ 0.99
SEMA3B-206ENST00000439487 EIF3DO15371 548 aaKnown RBP eCLIP21.25■□□□□ 0.99
SEMA3B-206ENST00000439487 MEFVO15553 781 aaPredicted RBP21.25■□□□□ 0.99
SEMA3B-206ENST00000439487 ALDH2P05091 517 aa21.25■□□□□ 0.99
SEMA3B-206ENST00000439487 THP07101 528 aa21.25■□□□□ 0.99
SEMA3B-206ENST00000439487 ADSSP30520 456 aa21.25■□□□□ 0.99
SEMA3B-206ENST00000439487 HOXD13P35453 343 aa21.25■□□□□ 0.99
SEMA3B-206ENST00000439487 PPM1AP35813 382 aa21.25■□□□□ 0.99
SEMA3B-206ENST00000439487 OR1G1P47890 313 aa21.25■□□□□ 0.99
SEMA3B-206ENST00000439487 STK4Q13043 487 aa21.25■□□□□ 0.99
SEMA3B-206ENST00000439487 PNOCQ13519 176 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms