RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 FOXD4L6Q3SYB3 417 aaPredicted RBP11.47□□□□□ -0.57
MCF2L-216ENST00000439475 KIAA1841Q6NSI8 718 aa11.47□□□□□ -0.57
MCF2L-216ENST00000439475 FOXD4L3Q6VB84 417 aaPredicted RBP11.47□□□□□ -0.57
MCF2L-216ENST00000439475 DYMQ7RTS9 669 aa11.47□□□□□ -0.57
MCF2L-216ENST00000439475 ZBTB33Q86T24 672 aa11.47□□□□□ -0.57
MCF2L-216ENST00000439475 PPFIBP1Q86W92 1011 aa11.47□□□□□ -0.57
MCF2L-216ENST00000439475 TMEM161BQ8NDZ6 487 aa11.47□□□□□ -0.57
MCF2L-216ENST00000439475 CASP10Q92851 521 aa11.47□□□□□ -0.57
MCF2L-216ENST00000439475 KCNN1Q92952 543 aa11.47□□□□□ -0.57
MCF2L-216ENST00000439475 PYM1Q9BRP8 204 aaKnown RBP11.47□□□□□ -0.57
MCF2L-216ENST00000439475 PANK2Q9BZ23 570 aa11.47□□□□□ -0.57
MCF2L-216ENST00000439475 ZBP1Q9H171 429 aa11.47□□□□□ -0.57
MCF2L-216ENST00000439475 CUEDC2Q9H467 287 aa11.47□□□□□ -0.57
MCF2L-216ENST00000439475 MRPL17Q9NRX2 175 aaKnown RBP11.47□□□□□ -0.57
MCF2L-216ENST00000439475 SEL1LQ9UBV2 794 aa11.47□□□□□ -0.57
MCF2L-216ENST00000439475 CD207Q9UJ71 328 aa11.47□□□□□ -0.57
MCF2L-216ENST00000439475 USP20Q9Y2K6 914 aa11.47□□□□□ -0.57
MCF2L-216ENST00000439475 IRAK3Q9Y616 596 aa11.47□□□□□ -0.57
MCF2L-216ENST00000439475 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.46□□□□□ -0.57
MCF2L-216ENST00000439475 C2orf71A6NGG8 1288 aa11.46□□□□□ -0.57
MCF2L-216ENST00000439475 K7ENM7 598 aa11.46□□□□□ -0.57
MCF2L-216ENST00000439475 SOD2P04179 222 aa11.46□□□□□ -0.57
MCF2L-216ENST00000439475 URODP06132 367 aa11.46□□□□□ -0.57
MCF2L-216ENST00000439475 HOXB8P17481 243 aaPredicted RBP11.46□□□□□ -0.57
MCF2L-216ENST00000439475 GAP43P17677 238 aa11.46□□□□□ -0.57
MCF2L-216ENST00000439475 GTF2F1P35269 517 aaKnown RBP eCLIP11.46□□□□□ -0.57
MCF2L-216ENST00000439475 LTBRP36941 435 aa11.46□□□□□ -0.57
MCF2L-216ENST00000439475 LIG4P49917 911 aa11.46□□□□□ -0.57
MCF2L-216ENST00000439475 TMEM184AQ6ZMB5 413 aa11.46□□□□□ -0.57
MCF2L-216ENST00000439475 PDILTQ8N807 584 aa11.46□□□□□ -0.57
MCF2L-216ENST00000439475 IQUBQ8NA54 791 aa11.46□□□□□ -0.57
MCF2L-216ENST00000439475 GSTCDQ8NEC7 633 aa11.46□□□□□ -0.57
MCF2L-216ENST00000439475 DDX12PQ92771 950 aa11.46□□□□□ -0.57
MCF2L-216ENST00000439475 CDT1Q9H211 546 aa11.46□□□□□ -0.57
MCF2L-216ENST00000439475 PTPRHQ9HD43 1115 aa11.46□□□□□ -0.57
MCF2L-216ENST00000439475 SLC38A7Q9NVC3 462 aa11.46□□□□□ -0.57
MCF2L-216ENST00000439475 DPP7Q9UHL4 492 aa11.46□□□□□ -0.57
MCF2L-216ENST00000439475 TBX20Q9UMR3 447 aa11.46□□□□□ -0.57
MCF2L-216ENST00000439475 EXOC7Q9UPT5 735 aa11.46□□□□□ -0.57
MCF2L-216ENST00000439475 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.46□□□□□ -0.57
MCF2L-216ENST00000439475 HIDE1A8MVS5 230 aa11.45□□□□□ -0.58
MCF2L-216ENST00000439475 TNFRSF10AO00220 468 aa11.45□□□□□ -0.58
MCF2L-216ENST00000439475 LINC01565O15544 149 aa11.45□□□□□ -0.58
MCF2L-216ENST00000439475 BRD1O95696 1058 aa11.45□□□□□ -0.58
MCF2L-216ENST00000439475 EDN1P05305 212 aa11.45□□□□□ -0.58
MCF2L-216ENST00000439475 HARSP12081 509 aaKnown RBP11.45□□□□□ -0.58
MCF2L-216ENST00000439475 IDEP14735 1019 aa11.45□□□□□ -0.58
MCF2L-216ENST00000439475 PROZP22891 400 aa11.45□□□□□ -0.58
MCF2L-216ENST00000439475 KLRC2P26717 231 aa11.45□□□□□ -0.58
MCF2L-216ENST00000439475 ME1P48163 572 aa11.45□□□□□ -0.58
MCF2L-216ENST00000439475 OSTNP61366 133 aa11.45□□□□□ -0.58
MCF2L-216ENST00000439475 KRT85P78386 507 aa11.45□□□□□ -0.58
MCF2L-216ENST00000439475 GTF2BQ00403 316 aa11.45□□□□□ -0.58
MCF2L-216ENST00000439475 DLX2Q07687 328 aaPredicted RBP11.45□□□□□ -0.58
MCF2L-216ENST00000439475 ELAVL2Q12926 359 aaKnown RBP11.45□□□□□ -0.58
MCF2L-216ENST00000439475 SMAD4Q13485 552 aaKnown RBP11.45□□□□□ -0.58
MCF2L-216ENST00000439475 HSP90AA2PQ14568 343 aaPredicted RBP11.45□□□□□ -0.58
MCF2L-216ENST00000439475 NOLC1Q14978 699 aaKnown RBP eCLIP11.45□□□□□ -0.58
MCF2L-216ENST00000439475 USP41Q3LFD5 358 aa11.45□□□□□ -0.58
MCF2L-216ENST00000439475 TPRNQ4KMQ1 711 aa11.45□□□□□ -0.58
MCF2L-216ENST00000439475 SLFN12LQ6IEE8 588 aa11.45□□□□□ -0.58
MCF2L-216ENST00000439475 ELMSAN1Q6PJG2 1045 aa11.45□□□□□ -0.58
MCF2L-216ENST00000439475 TAS1R3Q7RTX0 852 aa11.45□□□□□ -0.58
MCF2L-216ENST00000439475 TMEM173Q86WV6 379 aaPredicted RBP11.45□□□□□ -0.58
MCF2L-216ENST00000439475 CCDC65Q8IXS2 484 aa11.45□□□□□ -0.58
MCF2L-216ENST00000439475 HVCN1Q96D96 273 aa11.45□□□□□ -0.58
MCF2L-216ENST00000439475 DDX27Q96GQ7 796 aaKnown RBP11.45□□□□□ -0.58
MCF2L-216ENST00000439475 UROC1Q96N76 676 aa11.45□□□□□ -0.58
MCF2L-216ENST00000439475 HERC2P3Q9BVR0 1158 aa11.45□□□□□ -0.58
MCF2L-216ENST00000439475 TNMDQ9H2S6 317 aa11.45□□□□□ -0.58
MCF2L-216ENST00000439475 ST6GALNAC4Q9H4F1 302 aa11.45□□□□□ -0.58
MCF2L-216ENST00000439475 ANKFY1Q9P2R3 1169 aa11.45□□□□□ -0.58
MCF2L-216ENST00000439475 PRKAG3Q9UGI9 489 aa11.45□□□□□ -0.58
MCF2L-216ENST00000439475 RCOR1Q9UKL0 485 aa11.45□□□□□ -0.58
MCF2L-216ENST00000439475 ADAM28Q9UKQ2 775 aa11.45□□□□□ -0.58
MCF2L-216ENST00000439475 PCDHB13Q9Y5F0 798 aa11.45□□□□□ -0.58
MCF2L-216ENST00000439475 PCDHGC5Q9Y5F6 944 aa11.45□□□□□ -0.58
MCF2L-216ENST00000439475 MYH15Q9Y2K3 1946 aa11.45□□□□□ -0.58
MCF2L-216ENST00000439475 MYMKA6NI61 221 aa11.44□□□□□ -0.58
MCF2L-216ENST00000439475 SPDYE4A6NLX3 237 aa11.44□□□□□ -0.58
MCF2L-216ENST00000439475 PTGESO14684 152 aa11.44□□□□□ -0.58
MCF2L-216ENST00000439475 HNRNPDLO14979 420 aaKnown RBP11.44□□□□□ -0.58
MCF2L-216ENST00000439475 MBTPS2O43462 519 aa11.44□□□□□ -0.58
MCF2L-216ENST00000439475 XPOTO43592 962 aaKnown RBP11.44□□□□□ -0.58
MCF2L-216ENST00000439475 TRAPPC3O43617 180 aa11.44□□□□□ -0.58
MCF2L-216ENST00000439475 CLASP2O75122 1294 aaKnown RBP11.44□□□□□ -0.58
MCF2L-216ENST00000439475 TBX10O75333 385 aa11.44□□□□□ -0.58
MCF2L-216ENST00000439475 IL9P15248 144 aa11.44□□□□□ -0.58
MCF2L-216ENST00000439475 GLUD2P49448 558 aa11.44□□□□□ -0.58
MCF2L-216ENST00000439475 DNM1Q05193 864 aaKnown RBP11.44□□□□□ -0.58
MCF2L-216ENST00000439475 MCL1Q07820 350 aa11.44□□□□□ -0.58
MCF2L-216ENST00000439475 COASYQ13057 564 aa11.44□□□□□ -0.58
MCF2L-216ENST00000439475 ALCAMQ13740 583 aa11.44□□□□□ -0.58
MCF2L-216ENST00000439475 POSTNQ15063 836 aa11.44□□□□□ -0.58
MCF2L-216ENST00000439475 HERC4Q5GLZ8 1057 aaPredicted RBP11.44□□□□□ -0.58
MCF2L-216ENST00000439475 CES5AQ6NT32 575 aa11.44□□□□□ -0.58
MCF2L-216ENST00000439475 FUT10Q6P4F1 479 aa11.44□□□□□ -0.58
MCF2L-216ENST00000439475 DCLRE1AQ6PJP8 1040 aa11.44□□□□□ -0.58
MCF2L-216ENST00000439475 STXBP4Q6ZWJ1 553 aa11.44□□□□□ -0.58
MCF2L-216ENST00000439475 ZNF720Q7Z2F6 126 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms