RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 LMNAP02545 664 aaKnown RBP4.23□□□□□ -1.73
HMGB1P18-201ENST00000438801 LAG3P18627 525 aa4.23□□□□□ -1.73
HMGB1P18-201ENST00000438801 POU3F2P20265 443 aaPredicted RBP4.23□□□□□ -1.73
HMGB1P18-201ENST00000438801 XPAP23025 273 aaPredicted RBP4.23□□□□□ -1.73
HMGB1P18-201ENST00000438801 ZFP36P26651 326 aaKnown RBP4.23□□□□□ -1.73
HMGB1P18-201ENST00000438801 GPR15P49685 360 aa4.23□□□□□ -1.73
HMGB1P18-201ENST00000438801 GZMKP49863 264 aa4.23□□□□□ -1.73
HMGB1P18-201ENST00000438801 PTTG1IPP53801 180 aa4.23□□□□□ -1.73
HMGB1P18-201ENST00000438801 TCEA2Q15560 299 aa4.23□□□□□ -1.73
HMGB1P18-201ENST00000438801 TAS1R1Q7RTX1 841 aa4.23□□□□□ -1.73
HMGB1P18-201ENST00000438801 GAB3Q8WWW8 586 aa4.23□□□□□ -1.73
HMGB1P18-201ENST00000438801 IL17RAQ96F46 866 aa4.23□□□□□ -1.73
HMGB1P18-201ENST00000438801 FDXACB1Q9BRP7 624 aaPredicted RBP4.23□□□□□ -1.73
HMGB1P18-201ENST00000438801 SYT17Q9BSW7 474 aa4.23□□□□□ -1.73
HMGB1P18-201ENST00000438801 MTFR1LQ9H019 292 aa4.23□□□□□ -1.73
HMGB1P18-201ENST00000438801 TRPC5Q9UL62 973 aaPredicted RBP4.23□□□□□ -1.73
HMGB1P18-201ENST00000438801 HDAC5Q9UQL6 1122 aa4.23□□□□□ -1.73
HMGB1P18-201ENST00000438801 PHLDB1Q86UU1 1377 aa4.23□□□□□ -1.73
HMGB1P18-201ENST00000438801 ADAMTS12P58397 1594 aa4.23□□□□□ -1.73
HMGB1P18-201ENST00000438801 BIVM-ERCC5R4GMW8 1640 aa4.22□□□□□ -1.73
HMGB1P18-201ENST00000438801 CENPVL1A0A0U1RR11 272 aa4.22□□□□□ -1.73
HMGB1P18-201ENST00000438801 GRID2IPA4D2P6 1211 aa4.22□□□□□ -1.73
HMGB1P18-201ENST00000438801 NRP2O60462 931 aa4.22□□□□□ -1.73
HMGB1P18-201ENST00000438801 NUDT3O95989 172 aa4.22□□□□□ -1.73
HMGB1P18-201ENST00000438801 APOBEC3AP31941 199 aaPredicted RBP4.22□□□□□ -1.73
HMGB1P18-201ENST00000438801 KPNA1P52294 538 aaPredicted RBP4.22□□□□□ -1.73
HMGB1P18-201ENST00000438801 DUSP2Q05923 314 aa4.22□□□□□ -1.73
HMGB1P18-201ENST00000438801 KCTD2Q14681 263 aa4.22□□□□□ -1.73
HMGB1P18-201ENST00000438801 C21orf62-AS1Q17RA5 79 aa4.22□□□□□ -1.73
HMGB1P18-201ENST00000438801 CCDC178Q5BJE1 867 aa4.22□□□□□ -1.73
HMGB1P18-201ENST00000438801 GPR158Q5T848 1215 aa4.22□□□□□ -1.73
HMGB1P18-201ENST00000438801 IQSEC1Q6DN90 963 aa4.22□□□□□ -1.73
HMGB1P18-201ENST00000438801 CNNM4Q6P4Q7 775 aa4.22□□□□□ -1.73
HMGB1P18-201ENST00000438801 DOK3Q7L591 496 aa4.22□□□□□ -1.73
HMGB1P18-201ENST00000438801 LRRTM3Q86VH5 581 aa4.22□□□□□ -1.73
HMGB1P18-201ENST00000438801 MSL3Q8N5Y2 521 aaKnown RBP4.22□□□□□ -1.73
HMGB1P18-201ENST00000438801 MYEOVQ96EZ4 313 aa4.22□□□□□ -1.73
HMGB1P18-201ENST00000438801 NDC1Q9BTX1 674 aa4.22□□□□□ -1.73
HMGB1P18-201ENST00000438801 SLC46A2Q9BY10 475 aa4.22□□□□□ -1.73
HMGB1P18-201ENST00000438801 CD2APQ9Y5K6 639 aa4.22□□□□□ -1.73
HMGB1P18-201ENST00000438801 NEURL4Q96JN8 1562 aa4.22□□□□□ -1.73
HMGB1P18-201ENST00000438801 EFCAB5A4FU69 1503 aa4.21□□□□□ -1.73
HMGB1P18-201ENST00000438801 A0A1W2PR48 441 aa4.21□□□□□ -1.74
HMGB1P18-201ENST00000438801 PRSS38A1L453 326 aa4.21□□□□□ -1.74
HMGB1P18-201ENST00000438801 HSP90B1P14625 803 aaKnown RBP4.21□□□□□ -1.74
HMGB1P18-201ENST00000438801 LSP1P33241 339 aa4.21□□□□□ -1.74
HMGB1P18-201ENST00000438801 NRG3P56975 720 aa4.21□□□□□ -1.74
HMGB1P18-201ENST00000438801 PHC1P78364 1004 aa4.21□□□□□ -1.74
HMGB1P18-201ENST00000438801 FAM189BP81408 668 aa4.21□□□□□ -1.74
HMGB1P18-201ENST00000438801 MGAT5Q09328 741 aa4.21□□□□□ -1.74
HMGB1P18-201ENST00000438801 SART3Q15020 963 aaKnown RBP4.21□□□□□ -1.74
HMGB1P18-201ENST00000438801 HECTD2Q5U5R9 776 aa4.21□□□□□ -1.74
HMGB1P18-201ENST00000438801 LMBR1LQ6UX01 489 aa4.21□□□□□ -1.74
HMGB1P18-201ENST00000438801 GDF7Q7Z4P5 450 aa4.21□□□□□ -1.74
HMGB1P18-201ENST00000438801 XYLT1Q86Y38 959 aa4.21□□□□□ -1.74
HMGB1P18-201ENST00000438801 LILRA3Q8N6C8 439 aaPredicted RBP4.21□□□□□ -1.74
HMGB1P18-201ENST00000438801 ZNF610Q8N9Z0 462 aa4.21□□□□□ -1.74
HMGB1P18-201ENST00000438801 SMC1BQ8NDV3 1235 aa4.21□□□□□ -1.74
HMGB1P18-201ENST00000438801 GPR101Q96P66 508 aaPredicted RBP4.21□□□□□ -1.74
HMGB1P18-201ENST00000438801 DCLRE1CQ96SD1 692 aaKnown RBP4.21□□□□□ -1.74
HMGB1P18-201ENST00000438801 TOR3AQ9H497 397 aa4.21□□□□□ -1.74
HMGB1P18-201ENST00000438801 RIOX1Q9H6W3 641 aa4.21□□□□□ -1.74
HMGB1P18-201ENST00000438801 CYP4F11Q9HBI6 524 aa4.21□□□□□ -1.74
HMGB1P18-201ENST00000438801 TRPM5Q9NZQ8 1165 aa4.21□□□□□ -1.74
HMGB1P18-201ENST00000438801 ZNHIT2Q9UHR6 403 aa4.21□□□□□ -1.74
HMGB1P18-201ENST00000438801 CEP170BQ9Y4F5 1589 aaPredicted RBP4.21□□□□□ -1.74
HMGB1P18-201ENST00000438801 COL4A3Q01955 1670 aa4.21□□□□□ -1.74
HMGB1P18-201ENST00000438801 MYO3AQ8NEV4 1616 aa4.21□□□□□ -1.74
HMGB1P18-201ENST00000438801 PIEZO1Q92508 2521 aa4.2□□□□□ -1.74
HMGB1P18-201ENST00000438801 LRRC9Q6ZRR7 1453 aa4.2□□□□□ -1.74
HMGB1P18-201ENST00000438801 DHX57Q6P158 1386 aaKnown RBP4.2□□□□□ -1.74
HMGB1P18-201ENST00000438801 LCHNA4D1U4 455 aa4.2□□□□□ -1.74
HMGB1P18-201ENST00000438801 TMEM200CA6NKL6 621 aa4.2□□□□□ -1.74
HMGB1P18-201ENST00000438801 PRR5-ARHGAP8B1AHC4 643 aa4.2□□□□□ -1.74
HMGB1P18-201ENST00000438801 LPXNO60711 386 aa4.2□□□□□ -1.74
HMGB1P18-201ENST00000438801 OCRLQ01968 901 aa4.2□□□□□ -1.74
HMGB1P18-201ENST00000438801 TAP1Q03518 808 aa4.2□□□□□ -1.74
HMGB1P18-201ENST00000438801 PCBP1Q15365 356 aaKnown RBP eCLIP4.2□□□□□ -1.74
HMGB1P18-201ENST00000438801 CCDC144BQ3MJ40 725 aa4.2□□□□□ -1.74
HMGB1P18-201ENST00000438801 GPRIN1Q7Z2K8 1008 aa4.2□□□□□ -1.74
HMGB1P18-201ENST00000438801 HOMER1Q86YM7 354 aa4.2□□□□□ -1.74
HMGB1P18-201ENST00000438801 GLB1L2Q8IW92 636 aa4.2□□□□□ -1.74
HMGB1P18-201ENST00000438801 BEND2Q8NDZ0 799 aa4.2□□□□□ -1.74
HMGB1P18-201ENST00000438801 NINJ1Q92982 152 aa4.2□□□□□ -1.74
HMGB1P18-201ENST00000438801 RNPC3Q96LT9 517 aaKnown RBP4.2□□□□□ -1.74
HMGB1P18-201ENST00000438801 MS4A5Q9H3V2 200 aa4.2□□□□□ -1.74
HMGB1P18-201ENST00000438801 SPTLC3Q9NUV7 552 aa4.2□□□□□ -1.74
HMGB1P18-201ENST00000438801 PPP2R3BQ9Y5P8 575 aa4.2□□□□□ -1.74
HMGB1P18-201ENST00000438801 NUMBLQ9Y6R0 609 aa4.2□□□□□ -1.74
HMGB1P18-201ENST00000438801 BRWD3Q6RI45 1802 aa4.2□□□□□ -1.74
HMGB1P18-201ENST00000438801 COL6A3P12111 3177 aa4.2□□□□□ -1.74
HMGB1P18-201ENST00000438801 PCSK5Q92824 1860 aa4.2□□□□□ -1.74
HMGB1P18-201ENST00000438801 SETXQ7Z333 2677 aaKnown RBP4.19□□□□□ -1.74
HMGB1P18-201ENST00000438801 UHRF1BP1LA0JNW5 1464 aa4.19□□□□□ -1.74
HMGB1P18-201ENST00000438801 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP4.19□□□□□ -1.74
HMGB1P18-201ENST00000438801 LEFTY2O00292 366 aa4.19□□□□□ -1.74
HMGB1P18-201ENST00000438801 RNASET2O00584 256 aaKnown RBP4.19□□□□□ -1.74
HMGB1P18-201ENST00000438801 NCR1O76036 304 aa4.19□□□□□ -1.74
HMGB1P18-201ENST00000438801 TOMM70O94826 608 aa4.19□□□□□ -1.74
HMGB1P18-201ENST00000438801 ZEB1P37275 1124 aaPredicted RBP4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms