RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 APOBEC2Q9Y235 224 aaKnown RBP4.17□□□□□ -1.74
HMGB1P12-201ENST00000438594 TNPO3Q9Y5L0 923 aaKnown RBP4.17□□□□□ -1.74
HMGB1P12-201ENST00000438594 TIMM13Q9Y5L4 95 aaPredicted RBP4.17□□□□□ -1.74
HMGB1P12-201ENST00000438594 GPRASP1Q5JY77 1395 aa4.16□□□□□ -1.74
HMGB1P12-201ENST00000438594 ANKRD18BA2A2Z9 1011 aa4.16□□□□□ -1.74
HMGB1P12-201ENST00000438594 TRIM75PA6NK02 468 aa4.16□□□□□ -1.74
HMGB1P12-201ENST00000438594 TSPY2A6NKD2 308 aa4.16□□□□□ -1.74
HMGB1P12-201ENST00000438594 RASA4BC9J798 803 aa4.16□□□□□ -1.74
HMGB1P12-201ENST00000438594 MASP2O00187 686 aa4.16□□□□□ -1.74
HMGB1P12-201ENST00000438594 CPLX1O14810 134 aa4.16□□□□□ -1.74
HMGB1P12-201ENST00000438594 RASA4O43374 803 aa4.16□□□□□ -1.74
HMGB1P12-201ENST00000438594 FRS3O43559 492 aa4.16□□□□□ -1.74
HMGB1P12-201ENST00000438594 MYO1BO43795 1136 aa4.16□□□□□ -1.74
HMGB1P12-201ENST00000438594 DDX58O95786 925 aaKnown RBP4.16□□□□□ -1.74
HMGB1P12-201ENST00000438594 ZBED1O96006 694 aa4.16□□□□□ -1.74
HMGB1P12-201ENST00000438594 TSPY3P0CV98 308 aa4.16□□□□□ -1.74
HMGB1P12-201ENST00000438594 TSPY8P0CW00 308 aa4.16□□□□□ -1.74
HMGB1P12-201ENST00000438594 PYGMP11217 842 aa4.16□□□□□ -1.74
HMGB1P12-201ENST00000438594 ATF7P17544 494 aaPredicted RBP4.16□□□□□ -1.74
HMGB1P12-201ENST00000438594 BCL6P41182 706 aa4.16□□□□□ -1.74
HMGB1P12-201ENST00000438594 TSPY1Q01534 308 aa4.16□□□□□ -1.74
HMGB1P12-201ENST00000438594 NCAPHQ15003 741 aa4.16□□□□□ -1.74
HMGB1P12-201ENST00000438594 PLCB4Q15147 1175 aa4.16□□□□□ -1.74
HMGB1P12-201ENST00000438594 PTPN14Q15678 1187 aa4.16□□□□□ -1.74
HMGB1P12-201ENST00000438594 CHRNA2Q15822 529 aa4.16□□□□□ -1.74
HMGB1P12-201ENST00000438594 PARP10Q53GL7 1025 aa4.16□□□□□ -1.74
HMGB1P12-201ENST00000438594 USP39Q53GS9 565 aaKnown RBP4.16□□□□□ -1.74
HMGB1P12-201ENST00000438594 PRR16Q569H4 304 aa4.16□□□□□ -1.74
HMGB1P12-201ENST00000438594 TRIM61Q5EBN2 209 aa4.16□□□□□ -1.74
HMGB1P12-201ENST00000438594 PHF19Q5T6S3 580 aa4.16□□□□□ -1.74
HMGB1P12-201ENST00000438594 ITPRIPL1Q6GPH6 555 aa4.16□□□□□ -1.74
HMGB1P12-201ENST00000438594 KIAA1211LQ6NV74 962 aa4.16□□□□□ -1.74
HMGB1P12-201ENST00000438594 TEPPQ6URK8 271 aa4.16□□□□□ -1.74
HMGB1P12-201ENST00000438594 UNC5DQ6UXZ4 953 aa4.16□□□□□ -1.74
HMGB1P12-201ENST00000438594 CCDC73Q6ZRK6 1079 aa4.16□□□□□ -1.74
HMGB1P12-201ENST00000438594 MCM10Q7L590 875 aa4.16□□□□□ -1.74
HMGB1P12-201ENST00000438594 RALYLQ86SE5 291 aaKnown RBP4.16□□□□□ -1.74
HMGB1P12-201ENST00000438594 DAAM2Q86T65 1068 aa4.16□□□□□ -1.74
HMGB1P12-201ENST00000438594 ERC1Q8IUD2 1116 aa4.16□□□□□ -1.74
HMGB1P12-201ENST00000438594 ANKRD18AQ8IVF6 992 aa4.16□□□□□ -1.74
HMGB1P12-201ENST00000438594 CRACR2BQ8N4Y2 399 aaPredicted RBP4.16□□□□□ -1.74
HMGB1P12-201ENST00000438594 OR8H1Q8NGG4 311 aa4.16□□□□□ -1.74
HMGB1P12-201ENST00000438594 SLC7A14Q8TBB6 771 aa4.16□□□□□ -1.74
HMGB1P12-201ENST00000438594 TRIM63Q969Q1 353 aa4.16□□□□□ -1.74
HMGB1P12-201ENST00000438594 CFAP53Q96M91 514 aa4.16□□□□□ -1.74
HMGB1P12-201ENST00000438594 TMEM209Q96SK2 561 aa4.16□□□□□ -1.74
HMGB1P12-201ENST00000438594 RMDN3Q96TC7 470 aa4.16□□□□□ -1.74
HMGB1P12-201ENST00000438594 TBCBQ99426 244 aa4.16□□□□□ -1.74
HMGB1P12-201ENST00000438594 CDC6Q99741 560 aa4.16□□□□□ -1.74
HMGB1P12-201ENST00000438594 LSM14BQ9BX40 385 aaKnown RBP4.16□□□□□ -1.74
HMGB1P12-201ENST00000438594 VTA1Q9NP79 307 aa4.16□□□□□ -1.74
HMGB1P12-201ENST00000438594 NMRK2Q9NPI5 230 aa4.16□□□□□ -1.74
HMGB1P12-201ENST00000438594 PDRG1Q9NUG6 133 aa4.16□□□□□ -1.74
HMGB1P12-201ENST00000438594 APEX2Q9UBZ4 518 aa4.16□□□□□ -1.74
HMGB1P12-201ENST00000438594 SMC3Q9UQE7 1217 aa4.16□□□□□ -1.74
HMGB1P12-201ENST00000438594 LRCH1Q9Y2L9 728 aa4.16□□□□□ -1.74
HMGB1P12-201ENST00000438594 PCDHB4Q9Y5E5 795 aa4.16□□□□□ -1.74
HMGB1P12-201ENST00000438594 ANKRD34BA5PLL1 514 aa4.15□□□□□ -1.75
HMGB1P12-201ENST00000438594 B4E171 279 aa4.15□□□□□ -1.75
HMGB1P12-201ENST00000438594 H0Y3Z8 333 aa4.15□□□□□ -1.75
HMGB1P12-201ENST00000438594 HGSO14964 777 aaPredicted RBP4.15□□□□□ -1.75
HMGB1P12-201ENST00000438594 FOXS1O43638 330 aa4.15□□□□□ -1.75
HMGB1P12-201ENST00000438594 HTATSF1O43719 755 aaKnown RBP4.15□□□□□ -1.75
HMGB1P12-201ENST00000438594 MAFKO60675 156 aa4.15□□□□□ -1.75
HMGB1P12-201ENST00000438594 CTNND1O60716 968 aaKnown RBP4.15□□□□□ -1.75
HMGB1P12-201ENST00000438594 PQBP1O60828 265 aaKnown RBP4.15□□□□□ -1.75
HMGB1P12-201ENST00000438594 TMEM127O75204 238 aa4.15□□□□□ -1.75
HMGB1P12-201ENST00000438594 IL33O95760 270 aa4.15□□□□□ -1.75
HMGB1P12-201ENST00000438594 HRGP04196 525 aa4.15□□□□□ -1.75
HMGB1P12-201ENST00000438594 MYBP10242 640 aa4.15□□□□□ -1.75
HMGB1P12-201ENST00000438594 HSPA6P17066 643 aa4.15□□□□□ -1.75
HMGB1P12-201ENST00000438594 RPL17P18621 184 aaKnown RBP4.15□□□□□ -1.75
HMGB1P12-201ENST00000438594 SMARCA1P28370 1054 aa4.15□□□□□ -1.75
HMGB1P12-201ENST00000438594 CASQ1P31415 396 aa4.15□□□□□ -1.75
HMGB1P12-201ENST00000438594 MAN2A2P49641 1150 aa4.15□□□□□ -1.75
HMGB1P12-201ENST00000438594 MRE11P49959 708 aa4.15□□□□□ -1.75
HMGB1P12-201ENST00000438594 TNFAIP2Q03169 654 aa4.15□□□□□ -1.75
HMGB1P12-201ENST00000438594 BTKQ06187 659 aa4.15□□□□□ -1.75
HMGB1P12-201ENST00000438594 PPP2R5BQ15173 497 aa4.15□□□□□ -1.75
HMGB1P12-201ENST00000438594 CCNG2Q16589 344 aa4.15□□□□□ -1.75
HMGB1P12-201ENST00000438594 HECTD3Q5T447 861 aa4.15□□□□□ -1.75
HMGB1P12-201ENST00000438594 NUGGCQ68CJ6 796 aa4.15□□□□□ -1.75
HMGB1P12-201ENST00000438594 POMZP3Q6PJE2 187 aa4.15□□□□□ -1.75
HMGB1P12-201ENST00000438594 VHLLQ6RSH7 139 aa4.15□□□□□ -1.75
HMGB1P12-201ENST00000438594 TMCO3Q6UWJ1 677 aa4.15□□□□□ -1.75
HMGB1P12-201ENST00000438594 RNF207Q6ZRF8 634 aa4.15□□□□□ -1.75
HMGB1P12-201ENST00000438594 ENOSF1Q7L5Y1 443 aa4.15□□□□□ -1.75
HMGB1P12-201ENST00000438594 BRAPQ7Z569 592 aa4.15□□□□□ -1.75
HMGB1P12-201ENST00000438594 SRGAP1Q7Z6B7 1085 aa4.15□□□□□ -1.75
HMGB1P12-201ENST00000438594 FGD2Q7Z6J4 655 aa4.15□□□□□ -1.75
HMGB1P12-201ENST00000438594 RIOX2Q8IUF8 465 aa4.15□□□□□ -1.75
HMGB1P12-201ENST00000438594 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.15□□□□□ -1.75
HMGB1P12-201ENST00000438594 NRSN1Q8IZ57 195 aa4.15□□□□□ -1.75
HMGB1P12-201ENST00000438594 CARNMT1Q8N4J0 409 aa4.15□□□□□ -1.75
HMGB1P12-201ENST00000438594 C1orf162Q8NEQ5 155 aaPredicted RBP4.15□□□□□ -1.75
HMGB1P12-201ENST00000438594 NUDT10Q8NFP7 164 aa4.15□□□□□ -1.75
HMGB1P12-201ENST00000438594 SLC30A5Q8TAD4 765 aa4.15□□□□□ -1.75
HMGB1P12-201ENST00000438594 KLHL6Q8WZ60 621 aa4.15□□□□□ -1.75
HMGB1P12-201ENST00000438594 CENPIQ92674 756 aaPredicted RBP4.15□□□□□ -1.75
HMGB1P12-201ENST00000438594 N4BP2L2Q92802 583 aaPredicted RBP4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms