RNA–Protein interactions for RNA: ENST00000438571.5

GTF3A-204, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-204ENST00000438571 RIN2Q8WYP3 895 aaPredicted RBP20.09■□□□□ 0.81
GTF3A-204ENST00000438571 ATOH1Q92858 354 aaPredicted RBP20.09■□□□□ 0.81
GTF3A-204ENST00000438571 MYADMQ96S97 322 aa20.09■□□□□ 0.81
GTF3A-204ENST00000438571 CCDC113Q9H0I3 377 aa20.09■□□□□ 0.81
GTF3A-204ENST00000438571 DUSP12Q9UNI6 340 aa20.09■□□□□ 0.81
GTF3A-204ENST00000438571 SSX2IPQ9Y2D8 614 aa20.09■□□□□ 0.81
GTF3A-204ENST00000438571 ZMYM2Q9UBW7 1377 aa20.08■□□□□ 0.81
GTF3A-204ENST00000438571 ANK1P16157 1881 aa20.08■□□□□ 0.81
GTF3A-204ENST00000438571 RECQL4O94761 1208 aa20.08■□□□□ 0.81
GTF3A-204ENST00000438571 PRKCBP05771 671 aa20.08■□□□□ 0.81
GTF3A-204ENST00000438571 NPR3P17342 541 aa20.08■□□□□ 0.81
GTF3A-204ENST00000438571 IGFBP6P24592 240 aaPredicted RBP20.08■□□□□ 0.81
GTF3A-204ENST00000438571 RPA1P27694 616 aa20.08■□□□□ 0.81
GTF3A-204ENST00000438571 NAB2Q15742 525 aa20.08■□□□□ 0.81
GTF3A-204ENST00000438571 FAM187BQ17R55 369 aa20.08■□□□□ 0.81
GTF3A-204ENST00000438571 TTC38Q5R3I4 469 aa20.08■□□□□ 0.81
GTF3A-204ENST00000438571 NOSTRINQ8IVI9 506 aa20.08■□□□□ 0.81
GTF3A-204ENST00000438571 ZBTB8OSQ8IWT0 167 aa20.08■□□□□ 0.81
GTF3A-204ENST00000438571 FLCNQ8NFG4 579 aa20.08■□□□□ 0.81
GTF3A-204ENST00000438571 SMG7Q92540 1137 aaKnown RBP20.08■□□□□ 0.81
GTF3A-204ENST00000438571 PRIMPOLQ96LW4 560 aa20.08■□□□□ 0.81
GTF3A-204ENST00000438571 NACC1Q96RE7 527 aa20.08■□□□□ 0.81
GTF3A-204ENST00000438571 WDR6Q9NNW5 1121 aaKnown RBP20.08■□□□□ 0.81
GTF3A-204ENST00000438571 FANCMQ8IYD8 2048 aa20.07■□□□□ 0.8
GTF3A-204ENST00000438571 VPS13AQ96RL7 3174 aa20.07■□□□□ 0.8
GTF3A-204ENST00000438571 ARHGEF35A5YM69 484 aa20.07■□□□□ 0.8
GTF3A-204ENST00000438571 PI15O43692 258 aa20.07■□□□□ 0.8
GTF3A-204ENST00000438571 NR1I2O75469 434 aa20.07■□□□□ 0.8
GTF3A-204ENST00000438571 GBP2P32456 591 aaPredicted RBP20.07■□□□□ 0.8
GTF3A-204ENST00000438571 TUSC3Q13454 348 aa20.07■□□□□ 0.8
GTF3A-204ENST00000438571 TDGQ13569 410 aa20.07■□□□□ 0.8
GTF3A-204ENST00000438571 HSP90AA2PQ14568 343 aaPredicted RBP20.07■□□□□ 0.8
GTF3A-204ENST00000438571 SAFBQ15424 915 aaKnown RBP eCLIP20.07■□□□□ 0.8
GTF3A-204ENST00000438571 USP41Q3LFD5 358 aa20.07■□□□□ 0.8
GTF3A-204ENST00000438571 ASTLQ6HA08 431 aaPredicted RBP20.07■□□□□ 0.8
GTF3A-204ENST00000438571 LILRA6Q6PI73 481 aa20.07■□□□□ 0.8
GTF3A-204ENST00000438571 MFSD1Q9H3U5 465 aa20.07■□□□□ 0.8
GTF3A-204ENST00000438571 LIMCH1Q9UPQ0 1083 aa20.07■□□□□ 0.8
GTF3A-204ENST00000438571 N4BP3O15049 544 aa20.06■□□□□ 0.8
GTF3A-204ENST00000438571 CYP11B2P19099 503 aa20.06■□□□□ 0.8
GTF3A-204ENST00000438571 PRPF4BQ13523 1007 aaKnown RBP20.06■□□□□ 0.8
GTF3A-204ENST00000438571 C4orf32Q8N8J7 132 aa20.06■□□□□ 0.8
GTF3A-204ENST00000438571 KIF2CQ99661 725 aa20.06■□□□□ 0.8
GTF3A-204ENST00000438571 NT5C3AQ9H0P0 336 aa20.06■□□□□ 0.8
GTF3A-204ENST00000438571 FOXP1Q9H334 677 aaPredicted RBP20.06■□□□□ 0.8
GTF3A-204ENST00000438571 FNIP2Q9P278 1114 aa20.06■□□□□ 0.8
GTF3A-204ENST00000438571 CFAP54Q96N23 3096 aa20.06■□□□□ 0.8
GTF3A-204ENST00000438571 ADAM12O43184 909 aa20.05■□□□□ 0.8
GTF3A-204ENST00000438571 GFRA3O60609 400 aa20.05■□□□□ 0.8
GTF3A-204ENST00000438571 TADA2AO75478 443 aa20.05■□□□□ 0.8
GTF3A-204ENST00000438571 NAMPTP43490 491 aa20.05■□□□□ 0.8
GTF3A-204ENST00000438571 MAPK6Q16659 721 aa20.05■□□□□ 0.8
GTF3A-204ENST00000438571 TMEM132AQ24JP5 1023 aa20.05■□□□□ 0.8
GTF3A-204ENST00000438571 GLRA4Q5JXX5 417 aa20.05■□□□□ 0.8
GTF3A-204ENST00000438571 GET4Q7L5D6 327 aaPredicted RBP20.05■□□□□ 0.8
GTF3A-204ENST00000438571 FBXO18Q8NFZ0 1043 aa20.05■□□□□ 0.8
GTF3A-204ENST00000438571 DEPTORQ8TB45 409 aa20.05■□□□□ 0.8
GTF3A-204ENST00000438571 C2orf40Q9H1Z8 148 aa20.05■□□□□ 0.8
GTF3A-204ENST00000438571 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.05■□□□□ 0.8
GTF3A-204ENST00000438571 GDAQ9Y2T3 454 aa20.05■□□□□ 0.8
GTF3A-204ENST00000438571 SF3B1O75533 1304 aaKnown RBP eCLIP20.04■□□□□ 0.81e-6■■■■■ 64.6
GTF3A-204ENST00000438571 PATJQ8NI35 1801 aa20.04■□□□□ 0.8
GTF3A-204ENST00000438571 ACKR2O00590 384 aa20.04■□□□□ 0.8
GTF3A-204ENST00000438571 PAPLNO95428 1278 aa20.04■□□□□ 0.8
GTF3A-204ENST00000438571 CFHP08603 1231 aa20.04■□□□□ 0.8
GTF3A-204ENST00000438571 CCT6AP40227 531 aaKnown RBP20.04■□□□□ 0.8
GTF3A-204ENST00000438571 NT5DC1Q5TFE4 455 aa20.04■□□□□ 0.8
GTF3A-204ENST00000438571 FAM171A1Q5VUB5 890 aa20.04■□□□□ 0.8
GTF3A-204ENST00000438571 CEP57Q86XR8 500 aa20.04■□□□□ 0.8
GTF3A-204ENST00000438571 SIX5Q8N196 739 aa20.04■□□□□ 0.8
GTF3A-204ENST00000438571 CEP120Q8N960 986 aa20.04■□□□□ 0.8
GTF3A-204ENST00000438571 ERMNQ8TAM6 284 aa20.04■□□□□ 0.8
GTF3A-204ENST00000438571 CLSTN3Q9BQT9 956 aa20.04■□□□□ 0.8
GTF3A-204ENST00000438571 RHOBTB2Q9BYZ6 727 aa20.04■□□□□ 0.8
GTF3A-204ENST00000438571 BHMT2Q9H2M3 363 aa20.04■□□□□ 0.8
GTF3A-204ENST00000438571 PIDD1Q9HB75 910 aa20.04■□□□□ 0.8
GTF3A-204ENST00000438571 EPS15L1Q9UBC2 864 aa20.04■□□□□ 0.8
GTF3A-204ENST00000438571 FBXW11Q9UKB1 542 aa20.04■□□□□ 0.8
GTF3A-204ENST00000438571 KRBA1A5PL33 1030 aa20.03■□□□□ 0.8
GTF3A-204ENST00000438571 PP2D1A8MPX8 630 aa20.03■□□□□ 0.8
GTF3A-204ENST00000438571 THP07101 528 aa20.03■□□□□ 0.8
GTF3A-204ENST00000438571 TOB1P50616 345 aaPredicted RBP20.03■□□□□ 0.8
GTF3A-204ENST00000438571 NTHL1P78549 312 aa20.03■□□□□ 0.8
GTF3A-204ENST00000438571 ASCL5Q7RTU5 278 aa20.03■□□□□ 0.8
GTF3A-204ENST00000438571 LNX1Q8TBB1 728 aaPredicted RBP20.03■□□□□ 0.8
GTF3A-204ENST00000438571 HDAC7Q8WUI4 952 aa20.03■□□□□ 0.8
GTF3A-204ENST00000438571 LLPHQ9BRT6 129 aaKnown RBP20.03■□□□□ 0.8
GTF3A-204ENST00000438571 PRKD2Q9BZL6 878 aa20.03■□□□□ 0.8
GTF3A-204ENST00000438571 PLEKHA4Q9H4M7 779 aa20.03■□□□□ 0.8
GTF3A-204ENST00000438571 GOLGA2P5Q9HBQ8 144 aa20.03■□□□□ 0.8
GTF3A-204ENST00000438571 ZDHHC7Q9NXF8 308 aa20.03■□□□□ 0.8
GTF3A-204ENST00000438571 IGSF9Q9P2J2 1179 aa20.03■□□□□ 0.8
GTF3A-204ENST00000438571 FBXL21Q9UKT6 434 aa20.03■□□□□ 0.8
GTF3A-204ENST00000438571 ZMYND10O75800 440 aa20.02■□□□□ 0.8
GTF3A-204ENST00000438571 AOC1P19801 751 aa20.02■□□□□ 0.8
GTF3A-204ENST00000438571 FXR2P51116 673 aaKnown RBP eCLIP20.02■□□□□ 0.8
GTF3A-204ENST00000438571 CLCN5P51795 746 aa20.02■□□□□ 0.8
GTF3A-204ENST00000438571 NUBP1P53384 320 aa20.02■□□□□ 0.8
GTF3A-204ENST00000438571 ORC2Q13416 577 aaPredicted RBP20.02■□□□□ 0.8
GTF3A-204ENST00000438571 PSMD5Q16401 504 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms