RNA–Protein interactions for RNA: ENST00000438462.1

RTN4-211, Transcript of reticulon 4, humanhuman

TSL 5

Gene RTN4, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-211ENST00000438462 SH3BP5O60239 455 aa12.7□□□□□ -0.38
RTN4-211ENST00000438462 POLR2MP0CAP2 368 aa12.7□□□□□ -0.38
RTN4-211ENST00000438462 SLC7A14Q8TBB6 771 aa12.7□□□□□ -0.38
RTN4-211ENST00000438462 URGCPQ8TCY9 931 aa12.7□□□□□ -0.38
RTN4-211ENST00000438462 DEPDC1BQ8WUY9 529 aa12.7□□□□□ -0.38
RTN4-211ENST00000438462 FAM193BQ96PV7 902 aaPredicted RBP12.7□□□□□ -0.38
RTN4-211ENST00000438462 JMJD4Q9H9V9 463 aa12.7□□□□□ -0.38
RTN4-211ENST00000438462 VAT1LQ9HCJ6 419 aa12.7□□□□□ -0.38
RTN4-211ENST00000438462 SEPT9Q9UHD8 586 aaPredicted RBP12.7□□□□□ -0.38
RTN4-211ENST00000438462 ATXN2Q99700 1313 aaKnown RBP12.69□□□□□ -0.38
RTN4-211ENST00000438462 MYBPHLA2RUH7 354 aa12.69□□□□□ -0.38
RTN4-211ENST00000438462 F8W810 466 aa12.69□□□□□ -0.38
RTN4-211ENST00000438462 PPP1R11O60927 126 aaPredicted RBP12.69□□□□□ -0.38
RTN4-211ENST00000438462 BCKDHBP21953 392 aa12.69□□□□□ -0.38
RTN4-211ENST00000438462 AFF1P51825 1210 aaKnown RBP12.69□□□□□ -0.38
RTN4-211ENST00000438462 NLRX1Q86UT6 975 aa12.69□□□□□ -0.38
RTN4-211ENST00000438462 SAMD3Q8N6K7 520 aa12.69□□□□□ -0.38
RTN4-211ENST00000438462 OR2I1PQ8NGU4 316 aa12.69□□□□□ -0.38
RTN4-211ENST00000438462 WHAMMQ8TF30 809 aa12.69□□□□□ -0.38
RTN4-211ENST00000438462 ZNF668Q96K58 619 aaPredicted RBP12.69□□□□□ -0.38
RTN4-211ENST00000438462 ASB16Q96NS5 453 aa12.69□□□□□ -0.38
RTN4-211ENST00000438462 TOMM22Q9NS69 142 aa12.69□□□□□ -0.38
RTN4-211ENST00000438462 CHST7Q9NS84 486 aa12.69□□□□□ -0.38
RTN4-211ENST00000438462 HSPBP1Q9NZL4 362 aa12.69□□□□□ -0.38
RTN4-211ENST00000438462 RRP8O43159 456 aaKnown RBP12.68□□□□□ -0.38
RTN4-211ENST00000438462 CFIP05156 583 aa12.68□□□□□ -0.38
RTN4-211ENST00000438462 RHOP08100 348 aa12.68□□□□□ -0.38
RTN4-211ENST00000438462 POU2F2P09086 479 aa12.68□□□□□ -0.38
RTN4-211ENST00000438462 ATP5JP18859 108 aa12.68□□□□□ -0.38
RTN4-211ENST00000438462 EIF4BP23588 611 aaKnown RBP12.68□□□□□ -0.38
RTN4-211ENST00000438462 ZNF76P36508 570 aa12.68□□□□□ -0.38
RTN4-211ENST00000438462 NLRP11P59045 1033 aaKnown RBP12.68□□□□□ -0.38
RTN4-211ENST00000438462 C11orf74Q86VG3 221 aa12.68□□□□□ -0.38
RTN4-211ENST00000438462 RALGPS2Q86X27 583 aaPredicted RBP12.68□□□□□ -0.38
RTN4-211ENST00000438462 CLASRPQ8N2M8 674 aaKnown RBP12.68□□□□□ -0.38
RTN4-211ENST00000438462 MINDY1Q8N5J2 469 aa12.68□□□□□ -0.38
RTN4-211ENST00000438462 PDCD7Q8N8D1 485 aaKnown RBP12.68□□□□□ -0.38
RTN4-211ENST00000438462 TTC8Q8TAM2 541 aa12.68□□□□□ -0.38
RTN4-211ENST00000438462 RHPN1Q8TCX5 695 aa12.68□□□□□ -0.38
RTN4-211ENST00000438462 TMEM74BQ9NUR3 256 aa12.68□□□□□ -0.38
RTN4-211ENST00000438462 TNNQ9UQP3 1299 aa12.68□□□□□ -0.38
RTN4-211ENST00000438462 PI4KAP42356 2102 aa12.68□□□□□ -0.38
RTN4-211ENST00000438462 FAM149AA5PLN7 773 aa12.67□□□□□ -0.38
RTN4-211ENST00000438462 TERTO14746 1132 aaKnown RBP12.67□□□□□ -0.38
RTN4-211ENST00000438462 ORC4O43929 436 aa12.67□□□□□ -0.38
RTN4-211ENST00000438462 ATG13O75143 517 aa12.67□□□□□ -0.38
RTN4-211ENST00000438462 C22orf31O95567 290 aa12.67□□□□□ -0.38
RTN4-211ENST00000438462 CR2P20023 1033 aa12.67□□□□□ -0.38
RTN4-211ENST00000438462 VIPR2P41587 438 aa12.67□□□□□ -0.38
RTN4-211ENST00000438462 OR1G1P47890 313 aa12.67□□□□□ -0.38
RTN4-211ENST00000438462 STAT5BP51692 787 aa12.67□□□□□ -0.38
RTN4-211ENST00000438462 RHDQ02161 417 aa12.67□□□□□ -0.38
RTN4-211ENST00000438462 CREMQ03060 361 aa12.67□□□□□ -0.38
RTN4-211ENST00000438462 UBAP2LQ14157 1087 aaKnown RBP12.67□□□□□ -0.38
RTN4-211ENST00000438462 SLC23A3Q6PIS1 610 aa12.67□□□□□ -0.38
RTN4-211ENST00000438462 PRSS55Q6UWB4 352 aaPredicted RBP12.67□□□□□ -0.38
RTN4-211ENST00000438462 ARMCX6Q7L4S7 300 aa12.67□□□□□ -0.38
RTN4-211ENST00000438462 PLPPR4Q7Z2D5 763 aa12.67□□□□□ -0.38
RTN4-211ENST00000438462 NAXDQ8IW45 347 aa12.67□□□□□ -0.38
RTN4-211ENST00000438462 METTL13Q8N6R0 699 aa12.67□□□□□ -0.38
RTN4-211ENST00000438462 FZD8Q9H461 694 aa12.67□□□□□ -0.38
RTN4-211ENST00000438462 COL1A2P08123 1366 aa12.67□□□□□ -0.38
RTN4-211ENST00000438462 POMCP01189 267 aa12.66□□□□□ -0.38
RTN4-211ENST00000438462 CLCN3P51790 818 aa12.66□□□□□ -0.38
RTN4-211ENST00000438462 PCNX4Q63HM2 1172 aa12.66□□□□□ -0.38
RTN4-211ENST00000438462 TWF2Q6IBS0 349 aaKnown RBP12.66□□□□□ -0.38
RTN4-211ENST00000438462 TPSD1Q9BZJ3 242 aa12.66□□□□□ -0.38
RTN4-211ENST00000438462 JPH1Q9HDC5 661 aaPredicted RBP12.66□□□□□ -0.38
RTN4-211ENST00000438462 FLNCQ14315 2725 aa12.66□□□□□ -0.38
RTN4-211ENST00000438462 WDR27A2RRH5 827 aa12.65□□□□□ -0.38
RTN4-211ENST00000438462 ZBTB42B2RXF5 422 aa12.65□□□□□ -0.38
RTN4-211ENST00000438462 HBP1O60381 514 aa12.65□□□□□ -0.38
RTN4-211ENST00000438462 APBB3O95704 486 aa12.65□□□□□ -0.38
RTN4-211ENST00000438462 DGKEP52429 567 aa12.65□□□□□ -0.38
RTN4-211ENST00000438462 GRM4Q14833 912 aa12.65□□□□□ -0.38
RTN4-211ENST00000438462 USP41Q3LFD5 358 aa12.65□□□□□ -0.38
RTN4-211ENST00000438462 HIST2H2BCQ6DN03 193 aa12.65□□□□□ -0.38
RTN4-211ENST00000438462 SYT12Q8IV01 421 aa12.65□□□□□ -0.38
RTN4-211ENST00000438462 SMARCD2Q92925 531 aa12.65□□□□□ -0.38
RTN4-211ENST00000438462 GPRASP2Q96D09 838 aa12.65□□□□□ -0.38
RTN4-211ENST00000438462 GPR62Q9BZJ7 368 aa12.65□□□□□ -0.38
RTN4-211ENST00000438462 FAM105AQ9NUU6 356 aa12.65□□□□□ -0.38
RTN4-211ENST00000438462 EBF1Q9UH73 591 aa12.65□□□□□ -0.38
RTN4-211ENST00000438462 AKT3Q9Y243 479 aa12.65□□□□□ -0.38
RTN4-211ENST00000438462 HEMK1Q9Y5R4 338 aaPredicted RBP12.65□□□□□ -0.38
RTN4-211ENST00000438462 CSDE1O75534 798 aaKnown RBP12.64□□□□□ -0.39
RTN4-211ENST00000438462 SKIP12755 728 aa12.64□□□□□ -0.39
RTN4-211ENST00000438462 MYF5P13349 255 aa12.64□□□□□ -0.39
RTN4-211ENST00000438462 HLA-EP13747 358 aa12.64□□□□□ -0.39
RTN4-211ENST00000438462 DARSP14868 501 aaKnown RBP12.64□□□□□ -0.39
RTN4-211ENST00000438462 TLE3Q04726 772 aa12.64□□□□□ -0.39
RTN4-211ENST00000438462 UVSSAQ2YD98 709 aa12.64□□□□□ -0.39
RTN4-211ENST00000438462 PRSS36Q5K4E3 855 aa12.64□□□□□ -0.39
RTN4-211ENST00000438462 AXDND1Q5T1B0 1012 aaPredicted RBP12.64□□□□□ -0.39
RTN4-211ENST00000438462 FUT10Q6P4F1 479 aa12.64□□□□□ -0.39
RTN4-211ENST00000438462 GLRX5Q86SX6 157 aa12.64□□□□□ -0.39
RTN4-211ENST00000438462 MFSD6LQ8IWD5 586 aa12.64□□□□□ -0.39
RTN4-211ENST00000438462 COLGALT2Q8IYK4 626 aa12.64□□□□□ -0.39
RTN4-211ENST00000438462 GALNT15Q8N3T1 639 aa12.64□□□□□ -0.39
RTN4-211ENST00000438462 ARHGAP45Q92619 1136 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms