RNA–Protein interactions for RNA: ENST00000438066.1

SPEN-202, Transcript of spen family transcriptional repressor, humanhuman

TSL 3

Gene SPEN, Length 1,733 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-202ENST00000438066 ANAPC4Q9UJX5 808 aa7.37□□□□□ -1.23
SPEN-202ENST00000438066 PLAGL2Q9UPG8 496 aa7.37□□□□□ -1.23
SPEN-202ENST00000438066 CNTNAP5Q8WYK1 1306 aa7.37□□□□□ -1.23
SPEN-202ENST00000438066 COL15A1P39059 1388 aa7.37□□□□□ -1.23
SPEN-202ENST00000438066 BCL9O00512 1426 aa7.37□□□□□ -1.23
SPEN-202ENST00000438066 ANKRD36CQ5JPF3 1778 aa7.36□□□□□ -1.23
SPEN-202ENST00000438066 GRM8O00222 908 aa7.36□□□□□ -1.23
SPEN-202ENST00000438066 FOXP2O15409 715 aa7.36□□□□□ -1.23
SPEN-202ENST00000438066 ESR1P03372 595 aa7.36□□□□□ -1.23
SPEN-202ENST00000438066 MYL6BP14649 208 aa7.36□□□□□ -1.23
SPEN-202ENST00000438066 CLCN7P51798 805 aa7.36□□□□□ -1.23
SPEN-202ENST00000438066 PDE1AP54750 535 aa7.36□□□□□ -1.23
SPEN-202ENST00000438066 CDK17Q00537 523 aa7.36□□□□□ -1.23
SPEN-202ENST00000438066 DUSP4Q13115 394 aa7.36□□□□□ -1.23
SPEN-202ENST00000438066 IFIT5Q13325 482 aaKnown RBP7.36□□□□□ -1.23
SPEN-202ENST00000438066 TUSC3Q13454 348 aa7.36□□□□□ -1.23
SPEN-202ENST00000438066 MUM1Q2TAK8 710 aa7.36□□□□□ -1.23
SPEN-202ENST00000438066 WDR78Q5VTH9 848 aa7.36□□□□□ -1.23
SPEN-202ENST00000438066 COPS6Q7L5N1 327 aa7.36□□□□□ -1.23
SPEN-202ENST00000438066 TMPRSS7Q7RTY8 843 aa7.36□□□□□ -1.23
SPEN-202ENST00000438066 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.36□□□□□ -1.23
SPEN-202ENST00000438066 RIOX2Q8IUF8 465 aa7.36□□□□□ -1.23
SPEN-202ENST00000438066 KIAA0319LQ8IZA0 1049 aa7.36□□□□□ -1.23
SPEN-202ENST00000438066 LZTR1Q8N653 840 aa7.36□□□□□ -1.23
SPEN-202ENST00000438066 FERMT2Q96AC1 680 aa7.36□□□□□ -1.23
SPEN-202ENST00000438066 KAZALD1Q96I82 304 aa7.36□□□□□ -1.23
SPEN-202ENST00000438066 RAX2Q96IS3 184 aa7.36□□□□□ -1.23
SPEN-202ENST00000438066 MTA3Q9BTC8 594 aa7.36□□□□□ -1.23
SPEN-202ENST00000438066 LRFN3Q9BTN0 628 aa7.36□□□□□ -1.23
SPEN-202ENST00000438066 CRB3Q9BUF7 120 aa7.36□□□□□ -1.23
SPEN-202ENST00000438066 METTL22Q9BUU2 404 aaPredicted RBP7.36□□□□□ -1.23
SPEN-202ENST00000438066 KCTD10Q9H3F6 313 aa7.36□□□□□ -1.23
SPEN-202ENST00000438066 LRRC4CQ9HCJ2 640 aa7.36□□□□□ -1.23
SPEN-202ENST00000438066 L1RE1Q9UN81 338 aa7.36□□□□□ -1.23
SPEN-202ENST00000438066 RREB1Q92766 1687 aa7.36□□□□□ -1.23
SPEN-202ENST00000438066 KAT6BQ8WYB5 2073 aa7.36□□□□□ -1.23
SPEN-202ENST00000438066 GOLIM4O00461 696 aa7.35□□□□□ -1.23
SPEN-202ENST00000438066 SRGAP3O43295 1099 aa7.35□□□□□ -1.23
SPEN-202ENST00000438066 C4BPAP04003 597 aaKnown RBP7.35□□□□□ -1.23
SPEN-202ENST00000438066 NTRK1P04629 796 aa7.35□□□□□ -1.23
SPEN-202ENST00000438066 TYRP1P17643 537 aa7.35□□□□□ -1.23
SPEN-202ENST00000438066 TACR1P25103 407 aa7.35□□□□□ -1.23
SPEN-202ENST00000438066 HTR1BP28222 390 aa7.35□□□□□ -1.23
SPEN-202ENST00000438066 SDHAP31040 664 aa7.35□□□□□ -1.23
SPEN-202ENST00000438066 GJA4P35212 333 aa7.35□□□□□ -1.23
SPEN-202ENST00000438066 SLC16A1P53985 500 aa7.35□□□□□ -1.23
SPEN-202ENST00000438066 LGALS4P56470 323 aa7.35□□□□□ -1.23
SPEN-202ENST00000438066 AIMP1Q12904 312 aaKnown RBP7.35□□□□□ -1.23
SPEN-202ENST00000438066 FOXD4Q12950 439 aaPredicted RBP7.35□□□□□ -1.23
SPEN-202ENST00000438066 TUBB8Q3ZCM7 444 aa7.35□□□□□ -1.23
SPEN-202ENST00000438066 RNF220Q5VTB9 566 aa7.35□□□□□ -1.23
SPEN-202ENST00000438066 MYL10Q9BUA6 226 aa7.35□□□□□ -1.23
SPEN-202ENST00000438066 C22orf23Q9BZE7 217 aa7.35□□□□□ -1.23
SPEN-202ENST00000438066 RC3H2Q9HBD1 1191 aaKnown RBP7.35□□□□□ -1.23
SPEN-202ENST00000438066 TMOD3Q9NYL9 352 aa7.35□□□□□ -1.23
SPEN-202ENST00000438066 STAP2Q9UGK3 403 aa7.35□□□□□ -1.23
SPEN-202ENST00000438066 LIMCH1Q9UPQ0 1083 aa7.35□□□□□ -1.23
SPEN-202ENST00000438066 AOX1Q06278 1338 aa7.35□□□□□ -1.23
SPEN-202ENST00000438066 SPATA31A1Q5TZJ5 1347 aa7.35□□□□□ -1.23
SPEN-202ENST00000438066 F13BP05160 661 aa7.35□□□□□ -1.23
SPEN-202ENST00000438066 MMEP08473 750 aa7.35□□□□□ -1.23
SPEN-202ENST00000438066 COL8A1P27658 744 aa7.35□□□□□ -1.23
SPEN-202ENST00000438066 PIP4K2AP48426 406 aaPredicted RBP7.35□□□□□ -1.23
SPEN-202ENST00000438066 NEXNQ0ZGT2 675 aa7.35□□□□□ -1.23
SPEN-202ENST00000438066 GCKRQ14397 625 aa7.35□□□□□ -1.23
SPEN-202ENST00000438066 COL23A1Q86Y22 540 aaPredicted RBP7.35□□□□□ -1.23
SPEN-202ENST00000438066 TSPEARQ8WU66 669 aa7.35□□□□□ -1.23
SPEN-202ENST00000438066 TUBGCP5Q96RT8 1024 aa7.35□□□□□ -1.23
SPEN-202ENST00000438066 IFT122Q9HBG6 1241 aa7.35□□□□□ -1.23
SPEN-202ENST00000438066 TRMT13Q9NUP7 481 aaKnown RBP7.35□□□□□ -1.23
SPEN-202ENST00000438066 C9orf78Q9NZ63 289 aaPredicted RBP7.35□□□□□ -1.23
SPEN-202ENST00000438066 STOML1Q9UBI4 398 aa7.35□□□□□ -1.23
SPEN-202ENST00000438066 HDAC5Q9UQL6 1122 aa7.35□□□□□ -1.23
SPEN-202ENST00000438066 ZNF831Q5JPB2 1677 aa7.34□□□□□ -1.23
SPEN-202ENST00000438066 UBA6A0AVT1 1052 aaPredicted RBP7.34□□□□□ -1.23
SPEN-202ENST00000438066 CCDC154A6NI56 674 aa7.34□□□□□ -1.23
SPEN-202ENST00000438066 FADS2P1A8MWK0 482 aa7.34□□□□□ -1.23
SPEN-202ENST00000438066 MAFKO60675 156 aa7.34□□□□□ -1.23
SPEN-202ENST00000438066 PRPF6O94906 941 aaKnown RBP7.34□□□□□ -1.23
SPEN-202ENST00000438066 MX1P20591 662 aa7.34□□□□□ -1.23
SPEN-202ENST00000438066 SARSP49591 514 aaKnown RBP7.34□□□□□ -1.23
SPEN-202ENST00000438066 PRIM2P49643 509 aa7.34□□□□□ -1.23
SPEN-202ENST00000438066 RENBPP51606 427 aa7.34□□□□□ -1.23
SPEN-202ENST00000438066 CACNB3P54284 484 aa7.34□□□□□ -1.23
SPEN-202ENST00000438066 EPHA5P54756 1037 aa7.34□□□□□ -1.23
SPEN-202ENST00000438066 TRIM25Q14258 630 aaKnown RBP7.34□□□□□ -1.23
SPEN-202ENST00000438066 CNN3Q15417 329 aaKnown RBP7.34□□□□□ -1.23
SPEN-202ENST00000438066 ANO6Q4KMQ2 910 aa7.34□□□□□ -1.23
SPEN-202ENST00000438066 NME8Q8N427 588 aa7.34□□□□□ -1.23
SPEN-202ENST00000438066 BEND7Q8N7W2 519 aaPredicted RBP7.34□□□□□ -1.23
SPEN-202ENST00000438066 PLBD2Q8NHP8 589 aa7.34□□□□□ -1.23
SPEN-202ENST00000438066 ASB15Q8WXK1 588 aa7.34□□□□□ -1.23
SPEN-202ENST00000438066 PIGBQ92521 554 aa7.34□□□□□ -1.23
SPEN-202ENST00000438066 SUCLG2Q96I99 432 aa7.34□□□□□ -1.23
SPEN-202ENST00000438066 HHIPL1Q96JK4 782 aa7.34□□□□□ -1.23
SPEN-202ENST00000438066 GBP4Q96PP9 640 aa7.34□□□□□ -1.23
SPEN-202ENST00000438066 CGRRF1Q99675 332 aa7.34□□□□□ -1.23
SPEN-202ENST00000438066 MKNK2Q9HBH9 465 aa7.34□□□□□ -1.23
SPEN-202ENST00000438066 TNFRSF10DQ9UBN6 386 aa7.34□□□□□ -1.23
SPEN-202ENST00000438066 GTF2A1LQ9UNN4 478 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 111.2 ms