RNA–Protein interactions for RNA: ENST00000437366.2

NEFM-203, Transcript of neurofilament medium, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEFM, Length 3,148 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEFM-203ENST00000437366 TRIM7Q9C029 511 aa12.33□□□□□ -0.44
NEFM-203ENST00000437366 PPANQ9NQ55 473 aaKnown RBP12.33□□□□□ -0.44
NEFM-203ENST00000437366 XPNPEP1Q9NQW7 623 aa12.33□□□□□ -0.44
NEFM-203ENST00000437366 DNAJC17Q9NVM6 304 aaKnown RBP12.33□□□□□ -0.44
NEFM-203ENST00000437366 TRPC6Q9Y210 931 aa12.33□□□□□ -0.44
NEFM-203ENST00000437366 SPDYE16A6NNV3 312 aaPredicted RBP12.33□□□□□ -0.44
NEFM-203ENST00000437366 PGK2P07205 417 aa12.33□□□□□ -0.44
NEFM-203ENST00000437366 MAPTP10636 758 aaKnown RBP12.33□□□□□ -0.44
NEFM-203ENST00000437366 ANXA13P27216 316 aa12.33□□□□□ -0.44
NEFM-203ENST00000437366 IRAK1P51617 712 aa12.33□□□□□ -0.44
NEFM-203ENST00000437366 ZBTB41Q5SVQ8 909 aa12.33□□□□□ -0.44
NEFM-203ENST00000437366 TMEM270Q6UE05 265 aa12.33□□□□□ -0.44
NEFM-203ENST00000437366 LRRC45Q96CN5 670 aa12.33□□□□□ -0.44
NEFM-203ENST00000437366 MSTO1Q9BUK6 570 aa12.33□□□□□ -0.44
NEFM-203ENST00000437366 AGO2Q9UKV8 859 aaKnown RBP12.33□□□□□ -0.44
NEFM-203ENST00000437366 NDUFAB1O14561 156 aa12.33□□□□□ -0.44
NEFM-203ENST00000437366 DDX3YO15523 660 aaKnown RBP12.33□□□□□ -0.44
NEFM-203ENST00000437366 DKC1O60832 514 aaKnown RBP eCLIP12.33□□□□□ -0.44
NEFM-203ENST00000437366 MAPK4P31152 587 aa12.33□□□□□ -0.44
NEFM-203ENST00000437366 PPP1R7Q15435 360 aa12.33□□□□□ -0.44
NEFM-203ENST00000437366 SLFN11Q7Z7L1 901 aa12.33□□□□□ -0.44
NEFM-203ENST00000437366 TRIM50Q86XT4 487 aa12.33□□□□□ -0.44
NEFM-203ENST00000437366 MSL3Q8N5Y2 521 aaKnown RBP12.33□□□□□ -0.44
NEFM-203ENST00000437366 KLRG1Q96E93 195 aa12.33□□□□□ -0.44
NEFM-203ENST00000437366 NAP1L3Q99457 506 aaPredicted RBP12.33□□□□□ -0.44
NEFM-203ENST00000437366 FMO2Q99518 471 aa12.33□□□□□ -0.44
NEFM-203ENST00000437366 HEMGNQ9BXL5 484 aa12.33□□□□□ -0.44
NEFM-203ENST00000437366 RBAKQ9NYW8 714 aaPredicted RBP12.33□□□□□ -0.44
NEFM-203ENST00000437366 FBXO40Q9UH90 709 aa12.33□□□□□ -0.44
NEFM-203ENST00000437366 STXBP5LQ9Y2K9 1186 aa12.33□□□□□ -0.44
NEFM-203ENST00000437366 PCDHB4Q9Y5E5 795 aa12.33□□□□□ -0.44
NEFM-203ENST00000437366 TCRBV7S2A1N4TA0A589 114 aa12.32□□□□□ -0.44
NEFM-203ENST00000437366 DDNO94850 711 aaPredicted RBP12.32□□□□□ -0.44
NEFM-203ENST00000437366 LYPLA2O95372 231 aa12.32□□□□□ -0.44
NEFM-203ENST00000437366 PYGMP11217 842 aa12.32□□□□□ -0.44
NEFM-203ENST00000437366 NR1D1P20393 614 aa12.32□□□□□ -0.44
NEFM-203ENST00000437366 RFX1P22670 979 aa12.32□□□□□ -0.44
NEFM-203ENST00000437366 IRX3P78415 501 aaPredicted RBP12.32□□□□□ -0.44
NEFM-203ENST00000437366 FMO1Q01740 532 aa12.32□□□□□ -0.44
NEFM-203ENST00000437366 PPATQ06203 517 aa12.32□□□□□ -0.44
NEFM-203ENST00000437366 CUL1Q13616 776 aa12.32□□□□□ -0.44
NEFM-203ENST00000437366 CATSPERGQ6ZRH7 1159 aa12.32□□□□□ -0.44
NEFM-203ENST00000437366 APOBEC3FQ8IUX4 373 aaKnown RBP12.32□□□□□ -0.44
NEFM-203ENST00000437366 LRRC71Q8N4P6 559 aa12.32□□□□□ -0.44
NEFM-203ENST00000437366 C1orf54Q8WWF1 131 aa12.32□□□□□ -0.44
NEFM-203ENST00000437366 MAP3K20Q9NYL2 800 aaKnown RBP12.32□□□□□ -0.44
NEFM-203ENST00000437366 CENPFP49454 3210 aa12.32□□□□□ -0.44
NEFM-203ENST00000437366 CLDN3O15551 220 aa12.32□□□□□ -0.44
NEFM-203ENST00000437366 GJB6O95452 261 aa12.32□□□□□ -0.44
NEFM-203ENST00000437366 CHRNB2P17787 502 aa12.32□□□□□ -0.44
NEFM-203ENST00000437366 MYBPC2Q14324 1141 aa12.32□□□□□ -0.44
NEFM-203ENST00000437366 LY6KQ17RY6 165 aa12.32□□□□□ -0.44
NEFM-203ENST00000437366 XKR3Q5GH77 459 aa12.32□□□□□ -0.44
NEFM-203ENST00000437366 MOB2Q70IA6 237 aa12.32□□□□□ -0.44
NEFM-203ENST00000437366 FAM71AQ8IYT1 594 aa12.32□□□□□ -0.44
NEFM-203ENST00000437366 ZBTB10Q96DT7 871 aa12.32□□□□□ -0.44
NEFM-203ENST00000437366 CDHR1Q96JP9 859 aa12.32□□□□□ -0.44
NEFM-203ENST00000437366 CALR3Q96L12 384 aaKnown RBP12.32□□□□□ -0.44
NEFM-203ENST00000437366 CCDC114Q96M63 670 aa12.32□□□□□ -0.44
NEFM-203ENST00000437366 C11orf70Q9BRQ4 267 aa12.32□□□□□ -0.44
NEFM-203ENST00000437366 ELP3Q9H9T3 547 aa12.32□□□□□ -0.44
NEFM-203ENST00000437366 TMEM59LQ9UK28 342 aa12.32□□□□□ -0.44
NEFM-203ENST00000437366 CSADQ9Y600 493 aa12.32□□□□□ -0.44
NEFM-203ENST00000437366 ADM5C9JUS6 153 aa12.31□□□□□ -0.44
NEFM-203ENST00000437366 NOP56O00567 594 aaKnown RBP12.31□□□□□ -0.44
NEFM-203ENST00000437366 SLCO1A2P46721 670 aa12.31□□□□□ -0.44
NEFM-203ENST00000437366 WNT7BP56706 349 aa12.31□□□□□ -0.44
NEFM-203ENST00000437366 IGBP1P78318 339 aa12.31□□□□□ -0.44
NEFM-203ENST00000437366 CCDC137Q6PK04 289 aaKnown RBP12.31□□□□□ -0.44
NEFM-203ENST00000437366 TEX2Q8IWB9 1127 aa12.31□□□□□ -0.44
NEFM-203ENST00000437366 HELQQ8TDG4 1101 aa12.31□□□□□ -0.44
NEFM-203ENST00000437366 MTFR1LQ9H019 292 aa12.31□□□□□ -0.44
NEFM-203ENST00000437366 RAB17Q9H0T7 212 aa12.31□□□□□ -0.44
NEFM-203ENST00000437366 NOVA2Q9UNW9 492 aaKnown RBP12.31□□□□□ -0.44
NEFM-203ENST00000437366 RRP15Q9Y3B9 282 aaKnown RBP12.31□□□□□ -0.44
NEFM-203ENST00000437366 C19orf81C9J6K1 198 aa12.31□□□□□ -0.44
NEFM-203ENST00000437366 P4HA2O15460 535 aa12.31□□□□□ -0.44
NEFM-203ENST00000437366 SUPT20HL2P0C7V6 817 aa12.31□□□□□ -0.44
NEFM-203ENST00000437366 NSFP46459 744 aaKnown RBP12.31□□□□□ -0.44
NEFM-203ENST00000437366 DRP2Q13474 957 aa12.31□□□□□ -0.44
NEFM-203ENST00000437366 VGLL4Q14135 290 aa12.31□□□□□ -0.44
NEFM-203ENST00000437366 SUPT20HL1Q3ZLR7 823 aa12.31□□□□□ -0.44
NEFM-203ENST00000437366 BRDTQ58F21 947 aaPredicted RBP12.31□□□□□ -0.44
NEFM-203ENST00000437366 SCARA5Q6ZMJ2 495 aa12.31□□□□□ -0.44
NEFM-203ENST00000437366 DPH6Q7L8W6 267 aa12.31□□□□□ -0.44
NEFM-203ENST00000437366 IQCKQ8N0W5 287 aa12.31□□□□□ -0.44
NEFM-203ENST00000437366 ASAP3Q8TDY4 903 aa12.31□□□□□ -0.44
NEFM-203ENST00000437366 RUBCNQ92622 972 aa12.31□□□□□ -0.44
NEFM-203ENST00000437366 CARD9Q9H257 536 aa12.31□□□□□ -0.44
NEFM-203ENST00000437366 KLHL11Q9NVR0 708 aa12.31□□□□□ -0.44
NEFM-203ENST00000437366 HLA-DRAP01903 254 aa12.31□□□□□ -0.44
NEFM-203ENST00000437366 SCP2P22307 547 aa12.31□□□□□ -0.44
NEFM-203ENST00000437366 SEC24CP53992 1094 aa12.31□□□□□ -0.44
NEFM-203ENST00000437366 HIRAP54198 1017 aaPredicted RBP12.31□□□□□ -0.44
NEFM-203ENST00000437366 SLC17A8Q8NDX2 589 aa12.31□□□□□ -0.44
NEFM-203ENST00000437366 OLIG1Q8TAK6 271 aa12.31□□□□□ -0.44
NEFM-203ENST00000437366 BBXQ8WY36 941 aaPredicted RBP12.31□□□□□ -0.44
NEFM-203ENST00000437366 CYFIP2Q96F07 1278 aa12.31□□□□□ -0.44
NEFM-203ENST00000437366 ZSWIM1Q9BR11 485 aa12.31□□□□□ -0.44
NEFM-203ENST00000437366 TIPINQ9BVW5 301 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms