RNA–Protein interactions for RNA: ENST00000436461.6

CALD1-209, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 1,614 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-209ENST00000436461 LAMA3Q16787 3333 aa18.29■□□□□ 0.52
CALD1-209ENST00000436461 ABHD14A-ACY1A0A1B0GW23 586 aa18.29■□□□□ 0.52
CALD1-209ENST00000436461 AKAP3O75969 853 aa18.29■□□□□ 0.52
CALD1-209ENST00000436461 RECQL4O94761 1208 aa18.29■□□□□ 0.52
CALD1-209ENST00000436461 CXCL8P10145 99 aa18.29■□□□□ 0.52
CALD1-209ENST00000436461 ACTN1P12814 892 aa18.29■□□□□ 0.52
CALD1-209ENST00000436461 GRM5P41594 1212 aa18.29■□□□□ 0.52
CALD1-209ENST00000436461 FKBP3Q00688 224 aaKnown RBP18.29■□□□□ 0.52
CALD1-209ENST00000436461 PSRC1Q6PGN9 363 aaPredicted RBP18.29■□□□□ 0.52
CALD1-209ENST00000436461 DHX40Q8IX18 779 aaKnown RBP18.29■□□□□ 0.52
CALD1-209ENST00000436461 TRAIPQ9BWF2 469 aa18.29■□□□□ 0.52
CALD1-209ENST00000436461 CBX8Q9HC52 389 aa18.29■□□□□ 0.52
CALD1-209ENST00000436461 C1orf112Q9NSG2 853 aa18.29■□□□□ 0.52
CALD1-209ENST00000436461 PARP2Q9UGN5 583 aa18.29■□□□□ 0.52
CALD1-209ENST00000436461 EXTL3O43909 919 aa18.28■□□□□ 0.52
CALD1-209ENST00000436461 FGFR1P11362 822 aa18.28■□□□□ 0.52
CALD1-209ENST00000436461 GATMP50440 423 aa18.28■□□□□ 0.52
CALD1-209ENST00000436461 AFF1P51825 1210 aaKnown RBP18.28■□□□□ 0.52
CALD1-209ENST00000436461 SPAG1Q07617 926 aa18.28■□□□□ 0.52
CALD1-209ENST00000436461 NCAPHQ15003 741 aa18.28■□□□□ 0.52
CALD1-209ENST00000436461 SNRNP35Q16560 246 aaKnown RBP18.28■□□□□ 0.52
CALD1-209ENST00000436461 NFIL3Q16649 462 aa18.28■□□□□ 0.52
CALD1-209ENST00000436461 TPD52L1Q16890 204 aaPredicted RBP18.28■□□□□ 0.52
CALD1-209ENST00000436461 FAM117BQ6P1L5 589 aa18.28■□□□□ 0.52
CALD1-209ENST00000436461 AGMOQ6ZNB7 445 aa18.28■□□□□ 0.52
CALD1-209ENST00000436461 ZNF598Q86UK7 904 aaKnown RBP18.28■□□□□ 0.52
CALD1-209ENST00000436461 SLC9A9Q8IVB4 645 aa18.28■□□□□ 0.52
CALD1-209ENST00000436461 ZC3H3Q8IXZ2 948 aaKnown RBP18.28■□□□□ 0.52
CALD1-209ENST00000436461 RNF214Q8ND24 703 aa18.28■□□□□ 0.52
CALD1-209ENST00000436461 FAM212AQ96EL1 285 aa18.28■□□□□ 0.52
CALD1-209ENST00000436461 FAM84AQ96KN4 292 aa18.28■□□□□ 0.52
CALD1-209ENST00000436461 NAT10Q9H0A0 1025 aaKnown RBP18.28■□□□□ 0.52
CALD1-209ENST00000436461 SAMSN1Q9NSI8 373 aaKnown RBP18.28■□□□□ 0.52
CALD1-209ENST00000436461 CPSF3Q9UKF6 684 aaKnown RBP18.28■□□□□ 0.52
CALD1-209ENST00000436461 NFE2L3Q9Y4A8 694 aa18.28■□□□□ 0.52
CALD1-209ENST00000436461 CETN3O15182 167 aa18.27■□□□□ 0.52
CALD1-209ENST00000436461 ZNF623O75123 536 aa18.27■□□□□ 0.52
CALD1-209ENST00000436461 ITGA4P13612 1032 aa18.27■□□□□ 0.52
CALD1-209ENST00000436461 RPL13P26373 211 aaKnown RBP18.27■□□□□ 0.52
CALD1-209ENST00000436461 RAB27AP51159 221 aa18.27■□□□□ 0.52
CALD1-209ENST00000436461 FAM189BP81408 668 aa18.27■□□□□ 0.52
CALD1-209ENST00000436461 ENOX2Q16206 610 aaKnown RBP18.27■□□□□ 0.52
CALD1-209ENST00000436461 RALGAPA2Q2PPJ7 1873 aa18.27■□□□□ 0.52
CALD1-209ENST00000436461 APBB1IPQ7Z5R6 666 aaPredicted RBP18.27■□□□□ 0.52
CALD1-209ENST00000436461 MRPL10Q7Z7H8 261 aaKnown RBP18.27■□□□□ 0.52
CALD1-209ENST00000436461 LUZP1Q86V48 1076 aa18.27■□□□□ 0.52
CALD1-209ENST00000436461 GAS2L3Q86XJ1 694 aa18.27■□□□□ 0.52
CALD1-209ENST00000436461 CREBRFQ8IUR6 639 aa18.27■□□□□ 0.52
CALD1-209ENST00000436461 ENOX1Q8TC92 643 aaKnown RBP18.27■□□□□ 0.52
CALD1-209ENST00000436461 FBXL18Q96ME1 805 aa18.27■□□□□ 0.52
CALD1-209ENST00000436461 ZFP42Q96MM3 310 aa18.27■□□□□ 0.52
CALD1-209ENST00000436461 ACAP3Q96P50 834 aa18.27■□□□□ 0.52
CALD1-209ENST00000436461 CCDC94Q9BW85 323 aaPredicted RBP18.27■□□□□ 0.52
CALD1-209ENST00000436461 BAIAP3O94812 1187 aa18.27■□□□□ 0.51
CALD1-209ENST00000436461 MLH1P40692 756 aa18.27■□□□□ 0.51
CALD1-209ENST00000436461 MYL5Q02045 173 aa18.27■□□□□ 0.51
CALD1-209ENST00000436461 MLLT1Q03111 559 aaPredicted RBP18.27■□□□□ 0.51
CALD1-209ENST00000436461 IQCB1Q15051 598 aa18.27■□□□□ 0.51
CALD1-209ENST00000436461 SLC10A6Q3KNW5 377 aa18.27■□□□□ 0.51
CALD1-209ENST00000436461 CT47A1Q5JQC4 288 aaPredicted RBP18.27■□□□□ 0.51
CALD1-209ENST00000436461 SPATA1Q5VX52 437 aa18.27■□□□□ 0.51
CALD1-209ENST00000436461 TMEM130Q8N3G9 435 aa18.27■□□□□ 0.51
CALD1-209ENST00000436461 RPF1Q9H9Y2 349 aaKnown RBP18.27■□□□□ 0.51
CALD1-209ENST00000436461 FANCLQ9NW38 375 aa18.27■□□□□ 0.51
CALD1-209ENST00000436461 RBAKQ9NYW8 714 aaPredicted RBP18.27■□□□□ 0.51
CALD1-209ENST00000436461 PCDHB7Q9Y5E2 793 aa18.27■□□□□ 0.51
CALD1-209ENST00000436461 PDCD11Q14690 1871 aaKnown RBP18.26■□□□□ 0.51
CALD1-209ENST00000436461 FNDC1Q4ZHG4 1894 aaPredicted RBP18.26■□□□□ 0.51
CALD1-209ENST00000436461 LDHAP00338 332 aaKnown RBP18.26■□□□□ 0.51
CALD1-209ENST00000436461 CLTAP09496 248 aa18.26■□□□□ 0.51
CALD1-209ENST00000436461 KCNJ6P48051 423 aa18.26■□□□□ 0.51
CALD1-209ENST00000436461 SHHQ15465 462 aa18.26■□□□□ 0.51
CALD1-209ENST00000436461 GLRA4Q5JXX5 417 aa18.26■□□□□ 0.51
CALD1-209ENST00000436461 CLLU1OSQ5K130 101 aa18.26■□□□□ 0.51
CALD1-209ENST00000436461 IRF2BP1Q8IU81 584 aa18.26■□□□□ 0.51
CALD1-209ENST00000436461 FAM186BQ8IYM0 893 aa18.26■□□□□ 0.51
CALD1-209ENST00000436461 CRIPAKQ8N1N5 446 aa18.26■□□□□ 0.51
CALD1-209ENST00000436461 PLEKHO2Q8TD55 490 aa18.26■□□□□ 0.51
CALD1-209ENST00000436461 HELQQ8TDG4 1101 aa18.26■□□□□ 0.51
CALD1-209ENST00000436461 HERVK_113Q902F9 699 aa18.26■□□□□ 0.51
CALD1-209ENST00000436461 GAD1Q99259 594 aa18.26■□□□□ 0.51
CALD1-209ENST00000436461 GDF15Q99988 308 aa18.26■□□□□ 0.51
CALD1-209ENST00000436461 BPIFA3Q9BQP9 254 aa18.26■□□□□ 0.51
CALD1-209ENST00000436461 UBE2OQ9C0C9 1292 aaKnown RBP18.26■□□□□ 0.51
CALD1-209ENST00000436461 TMEM161AQ9NX61 479 aa18.26■□□□□ 0.51
CALD1-209ENST00000436461 LRFN2Q9ULH4 789 aa18.26■□□□□ 0.51
CALD1-209ENST00000436461 INPP5FQ9Y2H2 1132 aa18.26■□□□□ 0.51
CALD1-209ENST00000436461 FRMD4BQ9Y2L6 1034 aa18.26■□□□□ 0.51
CALD1-209ENST00000436461 TDRD15B5MCY1 1934 aaKnown RBP18.26■□□□□ 0.51
CALD1-209ENST00000436461 ZNF233A6NK53 670 aa18.25■□□□□ 0.51
CALD1-209ENST00000436461 KIAA0391O15091 583 aaKnown RBP18.25■□□□□ 0.51
CALD1-209ENST00000436461 AMHP03971 560 aa18.25■□□□□ 0.51
CALD1-209ENST00000436461 SKIP12755 728 aa18.25■□□□□ 0.51
CALD1-209ENST00000436461 MYBPC2Q14324 1141 aa18.25■□□□□ 0.51
CALD1-209ENST00000436461 LMBRD2Q68DH5 695 aaPredicted RBP18.25■□□□□ 0.51
CALD1-209ENST00000436461 FOXR2Q6PJQ5 311 aa18.25■□□□□ 0.51
CALD1-209ENST00000436461 BRSK2Q8IWQ3 736 aa18.25■□□□□ 0.51
CALD1-209ENST00000436461 TMEM174Q8WUU8 243 aa18.25■□□□□ 0.51
CALD1-209ENST00000436461 CCDC127Q96BQ5 260 aa18.25■□□□□ 0.51
CALD1-209ENST00000436461 HSD3B7Q9H2F3 369 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms