RNA–Protein interactions for RNA: ENST00000436289.6

NELFE-204, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 906 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-204ENST00000436289 B3GNT9Q6UX72 402 aa16.73■□□□□ 0.27
NELFE-204ENST00000436289 PRR23BQ6ZRT6 265 aa16.73■□□□□ 0.27
NELFE-204ENST00000436289 NPAS3Q8IXF0 933 aa16.73■□□□□ 0.27
NELFE-204ENST00000436289 CCDC148Q8NFR7 591 aa16.73■□□□□ 0.27
NELFE-204ENST00000436289 ITFG1Q8TB96 612 aa16.73■□□□□ 0.27
NELFE-204ENST00000436289 PIK3R5Q8WYR1 880 aa16.73■□□□□ 0.27
NELFE-204ENST00000436289 ELSPBP1Q96BH3 223 aa16.73■□□□□ 0.27
NELFE-204ENST00000436289 KXD1Q9BQD3 176 aa16.73■□□□□ 0.27
NELFE-204ENST00000436289 CLSTN3Q9BQT9 956 aa16.73■□□□□ 0.27
NELFE-204ENST00000436289 TRIM6Q9C030 488 aaPredicted RBP16.73■□□□□ 0.27
NELFE-204ENST00000436289 CSRNP2Q9H175 543 aa16.73■□□□□ 0.27
NELFE-204ENST00000436289 DHX33Q9H6R0 707 aaKnown RBP16.73■□□□□ 0.27
NELFE-204ENST00000436289 TRPV5Q9NQA5 729 aa16.73■□□□□ 0.27
NELFE-204ENST00000436289 AVENQ9NQS1 362 aaPredicted RBP16.73■□□□□ 0.27
NELFE-204ENST00000436289 MIOSQ9NXC5 875 aa16.73■□□□□ 0.27
NELFE-204ENST00000436289 ANKRD11Q6UB99 2663 aaPredicted RBP16.73■□□□□ 0.27
NELFE-204ENST00000436289 CXCL12P48061 93 aa16.72■□□□□ 0.27
NELFE-204ENST00000436289 EXOSC10Q01780 885 aaKnown RBP16.72■□□□□ 0.27
NELFE-204ENST00000436289 POU5F1BQ06416 359 aa16.72■□□□□ 0.27
NELFE-204ENST00000436289 COL9A2Q14055 689 aaPredicted RBP16.72■□□□□ 0.27
NELFE-204ENST00000436289 MXD4Q14582 209 aaPredicted RBP16.72■□□□□ 0.27
NELFE-204ENST00000436289 C1orf228Q6PIY5 440 aa16.72■□□□□ 0.27
NELFE-204ENST00000436289 DHX32Q7L7V1 743 aaKnown RBP16.72■□□□□ 0.27
NELFE-204ENST00000436289 IRF7Q92985 503 aa16.72■□□□□ 0.27
NELFE-204ENST00000436289 B3GALT6Q96L58 329 aa16.72■□□□□ 0.27
NELFE-204ENST00000436289 ZFP42Q96MM3 310 aa16.72■□□□□ 0.27
NELFE-204ENST00000436289 SH2D3AQ9BRG2 576 aa16.72■□□□□ 0.27
NELFE-204ENST00000436289 RNF39Q9H2S5 420 aa16.72■□□□□ 0.27
NELFE-204ENST00000436289 MINDY3Q9H8M7 445 aa16.72■□□□□ 0.27
NELFE-204ENST00000436289 HEBP1Q9NRV9 189 aa16.72■□□□□ 0.27
NELFE-204ENST00000436289 BRPF3Q9ULD4 1205 aa16.72■□□□□ 0.27
NELFE-204ENST00000436289 MRPS23Q9Y3D9 190 aaKnown RBP16.72■□□□□ 0.27
NELFE-204ENST00000436289 CYP3A7-CYP3A51PA0A087WV96 503 aa16.71■□□□□ 0.27
NELFE-204ENST00000436289 TMEM150BA6NC51 233 aa16.71■□□□□ 0.27
NELFE-204ENST00000436289 CCL16O15467 120 aa16.71■□□□□ 0.27
NELFE-204ENST00000436289 PRPF3O43395 683 aaKnown RBP16.71■□□□□ 0.27
NELFE-204ENST00000436289 PROS1P07225 676 aa16.71■□□□□ 0.27
NELFE-204ENST00000436289 CYP3A7P24462 503 aa16.71■□□□□ 0.27
NELFE-204ENST00000436289 QARSP47897 775 aaKnown RBP16.71■□□□□ 0.27
NELFE-204ENST00000436289 MLLT6P55198 1093 aaPredicted RBP16.71■□□□□ 0.27
NELFE-204ENST00000436289 AKAP17AQ02040 695 aaKnown RBP16.71■□□□□ 0.27
NELFE-204ENST00000436289 HSP90AA2PQ14568 343 aaPredicted RBP16.71■□□□□ 0.27
NELFE-204ENST00000436289 ACAP1Q15027 740 aa16.71■□□□□ 0.27
NELFE-204ENST00000436289 LPAL2Q16609 132 aa16.71■□□□□ 0.27
NELFE-204ENST00000436289 AXDND1Q5T1B0 1012 aaPredicted RBP16.71■□□□□ 0.27
NELFE-204ENST00000436289 OTUD6AQ7L8S5 288 aa16.71■□□□□ 0.27
NELFE-204ENST00000436289 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.71■□□□□ 0.27
NELFE-204ENST00000436289 ZNF687Q8N1G0 1237 aa16.71■□□□□ 0.27
NELFE-204ENST00000436289 RNF149Q8NC42 400 aa16.71■□□□□ 0.27
NELFE-204ENST00000436289 LNX1Q8TBB1 728 aaPredicted RBP16.71■□□□□ 0.27
NELFE-204ENST00000436289 CEP170P1Q96L14 293 aa16.71■□□□□ 0.27
NELFE-204ENST00000436289 LSG1Q9H089 658 aaKnown RBP16.71■□□□□ 0.27
NELFE-204ENST00000436289 DAXXQ9UER7 740 aaPredicted RBP16.71■□□□□ 0.27
NELFE-204ENST00000436289 F8W810 466 aa16.7■□□□□ 0.26
NELFE-204ENST00000436289 CDC27P30260 824 aa16.7■□□□□ 0.26
NELFE-204ENST00000436289 RAB33AQ14088 237 aa16.7■□□□□ 0.26
NELFE-204ENST00000436289 PSMD5Q16401 504 aa16.7■□□□□ 0.26
NELFE-204ENST00000436289 RTP2Q5QGT7 225 aa16.7■□□□□ 0.26
NELFE-204ENST00000436289 N4BP2L1Q5TBK1 243 aaPredicted RBP16.7■□□□□ 0.26
NELFE-204ENST00000436289 PRSS55Q6UWB4 352 aaPredicted RBP16.7■□□□□ 0.26
NELFE-204ENST00000436289 FERMT3Q86UX7 667 aa16.7■□□□□ 0.26
NELFE-204ENST00000436289 GSTCDQ8NEC7 633 aa16.7■□□□□ 0.26
NELFE-204ENST00000436289 SLC7A14Q8TBB6 771 aa16.7■□□□□ 0.26
NELFE-204ENST00000436289 FAM3CQ92520 227 aa16.7■□□□□ 0.26
NELFE-204ENST00000436289 TMEM143Q96AN5 459 aa16.7■□□□□ 0.26
NELFE-204ENST00000436289 EIF2AQ9BY44 585 aaKnown RBP16.7■□□□□ 0.26
NELFE-204ENST00000436289 BRD9Q9H8M2 597 aa16.7■□□□□ 0.26
NELFE-204ENST00000436289 LMAN1LQ9HAT1 526 aa16.7■□□□□ 0.26
NELFE-204ENST00000436289 DNMT3BQ9UBC3 853 aaKnown RBP16.7■□□□□ 0.26
NELFE-204ENST00000436289 FASNP49327 2511 aaKnown RBP16.7■□□□□ 0.26
NELFE-204ENST00000436289 DOCK6Q96HP0 2047 aa16.7■□□□□ 0.26
NELFE-204ENST00000436289 KLF18A0A0U1RQI7 1052 aa16.69■□□□□ 0.26
NELFE-204ENST00000436289 TSPAN1O60635 241 aa16.69■□□□□ 0.26
NELFE-204ENST00000436289 MICAL2O94851 1124 aa16.69■□□□□ 0.26
NELFE-204ENST00000436289 P4HBP07237 508 aaKnown RBP16.69■□□□□ 0.26
NELFE-204ENST00000436289 ADD1P35611 737 aaKnown RBP16.69■□□□□ 0.26
NELFE-204ENST00000436289 PTENP60484 403 aa16.69■□□□□ 0.26
NELFE-204ENST00000436289 TUSC3Q13454 348 aa16.69■□□□□ 0.26
NELFE-204ENST00000436289 TFDP1Q14186 410 aa16.69■□□□□ 0.26
NELFE-204ENST00000436289 FAM171A1Q5VUB5 890 aa16.69■□□□□ 0.26
NELFE-204ENST00000436289 MOXD1Q6UVY6 613 aa16.69■□□□□ 0.26
NELFE-204ENST00000436289 LONP2Q86WA8 852 aa16.69■□□□□ 0.26
NELFE-204ENST00000436289 IFNLR1Q8IU57 520 aaPredicted RBP16.69■□□□□ 0.26
NELFE-204ENST00000436289 SPEM1Q8N4L4 309 aa16.69■□□□□ 0.26
NELFE-204ENST00000436289 MSANTD3Q96H12 275 aa16.69■□□□□ 0.26
NELFE-204ENST00000436289 TRMT61BQ9BVS5 477 aaKnown RBP16.69■□□□□ 0.26
NELFE-204ENST00000436289 ZFP14Q9HCL3 533 aa16.69■□□□□ 0.26
NELFE-204ENST00000436289 NDRG2Q9UN36 371 aaKnown RBP16.69■□□□□ 0.26
NELFE-204ENST00000436289 HES2Q9Y543 173 aa16.69■□□□□ 0.26
NELFE-204ENST00000436289 SHISA7A6NL88 538 aa16.68■□□□□ 0.26
NELFE-204ENST00000436289 ZNF197O14709 1029 aa16.68■□□□□ 0.26
NELFE-204ENST00000436289 TM4SF5O14894 197 aa16.68■□□□□ 0.26
NELFE-204ENST00000436289 HRO43593 1189 aa16.68■□□□□ 0.26
NELFE-204ENST00000436289 EDIL3O43854 480 aa16.68■□□□□ 0.26
NELFE-204ENST00000436289 PAPSS2O95340 614 aaPredicted RBP16.68■□□□□ 0.26
NELFE-204ENST00000436289 HMGB1P09429 215 aaKnown RBP16.68■□□□□ 0.26
NELFE-204ENST00000436289 SPIRE1Q08AE8 756 aa16.68■□□□□ 0.26
NELFE-204ENST00000436289 PLA2G4FQ68DD2 849 aa16.68■□□□□ 0.26
NELFE-204ENST00000436289 CEP57Q86XR8 500 aa16.68■□□□□ 0.26
NELFE-204ENST00000436289 MCRS1Q96EZ8 462 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms