RNA–Protein interactions for RNA: ENST00000435747.2

CPNE1-214, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-214ENST00000435747 NPY5RQ15761 445 aa11.68□□□□□ -0.54
CPNE1-214ENST00000435747 COL28A1Q2UY09 1125 aa11.68□□□□□ -0.54
CPNE1-214ENST00000435747 PLA2G2CQ5R387 149 aa11.68□□□□□ -0.54
CPNE1-214ENST00000435747 JAKMIP3Q5VZ66 844 aa11.68□□□□□ -0.54
CPNE1-214ENST00000435747 TWF2Q6IBS0 349 aaKnown RBP11.68□□□□□ -0.54
CPNE1-214ENST00000435747 PDXDC2PQ6P474 469 aa11.68□□□□□ -0.54
CPNE1-214ENST00000435747 PROSER1Q86XN7 944 aa11.68□□□□□ -0.54
CPNE1-214ENST00000435747 GLYCTKQ8IVS8 523 aa11.68□□□□□ -0.54
CPNE1-214ENST00000435747 CKAP2LQ8IYA6 745 aa11.68□□□□□ -0.54
CPNE1-214ENST00000435747 SPEM1Q8N4L4 309 aa11.68□□□□□ -0.54
CPNE1-214ENST00000435747 ITFG1Q8TB96 612 aa11.68□□□□□ -0.54
CPNE1-214ENST00000435747 FAM3CQ92520 227 aa11.68□□□□□ -0.54
CPNE1-214ENST00000435747 BBC3Q96PG8 261 aaPredicted RBP11.68□□□□□ -0.54
CPNE1-214ENST00000435747 ZNF302Q9NR11 478 aa11.68□□□□□ -0.54
CPNE1-214ENST00000435747 CHST12Q9NRB3 414 aa11.68□□□□□ -0.54
CPNE1-214ENST00000435747 VPS45Q9NRW7 570 aa11.68□□□□□ -0.54
CPNE1-214ENST00000435747 PRG3Q9Y2Y8 225 aaPredicted RBP11.68□□□□□ -0.54
CPNE1-214ENST00000435747 MSRB2Q9Y3D2 182 aa11.68□□□□□ -0.54
CPNE1-214ENST00000435747 NOTCH4Q99466 2003 aa11.68□□□□□ -0.54
CPNE1-214ENST00000435747 ZNF462Q96JM2 2506 aa11.67□□□□□ -0.54
CPNE1-214ENST00000435747 C4orf47A7E2U8 309 aa11.67□□□□□ -0.54
CPNE1-214ENST00000435747 MEIS3P2A8K0S8 358 aa11.67□□□□□ -0.54
CPNE1-214ENST00000435747 K7ESF4 209 aa11.67□□□□□ -0.54
CPNE1-214ENST00000435747 M0R2N6 131 aa11.67□□□□□ -0.54
CPNE1-214ENST00000435747 MAGEB2O15479 319 aa11.67□□□□□ -0.54
CPNE1-214ENST00000435747 HYAL3O43820 417 aaPredicted RBP11.67□□□□□ -0.54
CPNE1-214ENST00000435747 PAPSS2O95340 614 aaPredicted RBP11.67□□□□□ -0.54
CPNE1-214ENST00000435747 SEC24BO95487 1268 aa11.67□□□□□ -0.54
CPNE1-214ENST00000435747 CEACAM1P13688 526 aa11.67□□□□□ -0.54
CPNE1-214ENST00000435747 MPLP40238 635 aa11.67□□□□□ -0.54
CPNE1-214ENST00000435747 FGD1P98174 961 aa11.67□□□□□ -0.54
CPNE1-214ENST00000435747 DSG1Q02413 1049 aa11.67□□□□□ -0.54
CPNE1-214ENST00000435747 ERICH6BQ5W0A0 696 aa11.67□□□□□ -0.54
CPNE1-214ENST00000435747 ABHD15Q6UXT9 468 aa11.67□□□□□ -0.54
CPNE1-214ENST00000435747 CACNA2D4Q7Z3S7 1137 aa11.67□□□□□ -0.54
CPNE1-214ENST00000435747 CCDC60Q8IWA6 550 aaPredicted RBP11.67□□□□□ -0.54
CPNE1-214ENST00000435747 GLIS3Q8NEA6 775 aa11.67□□□□□ -0.54
CPNE1-214ENST00000435747 TRAIPQ9BWF2 469 aa11.67□□□□□ -0.54
CPNE1-214ENST00000435747 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.67□□□□□ -0.54
CPNE1-214ENST00000435747 IGSF5Q9NSI5 407 aa11.67□□□□□ -0.54
CPNE1-214ENST00000435747 PPP4R2Q9NY27 417 aa11.67□□□□□ -0.54
CPNE1-214ENST00000435747 POLIQ9UNA4 740 aa11.67□□□□□ -0.54
CPNE1-214ENST00000435747 PCDHGA5Q9Y5G8 931 aa11.67□□□□□ -0.54
CPNE1-214ENST00000435747 XYLBO75191 536 aa11.66□□□□□ -0.54
CPNE1-214ENST00000435747 HNRNPA1P09651 372 aaKnown RBP eCLIP11.66□□□□□ -0.54
CPNE1-214ENST00000435747 ATP4AP20648 1035 aa11.66□□□□□ -0.54
CPNE1-214ENST00000435747 CSRP1P21291 193 aaKnown RBP11.66□□□□□ -0.54
CPNE1-214ENST00000435747 RAP1GAPP47736 663 aa11.66□□□□□ -0.54
CPNE1-214ENST00000435747 RAB27AP51159 221 aa11.66□□□□□ -0.54
CPNE1-214ENST00000435747 GPC3P51654 580 aa11.66□□□□□ -0.54
CPNE1-214ENST00000435747 GAS6Q14393 721 aa11.66□□□□□ -0.54
CPNE1-214ENST00000435747 LIN9Q5TKA1 542 aa11.66□□□□□ -0.54
CPNE1-214ENST00000435747 TCEAL6Q6IPX3 200 aa11.66□□□□□ -0.54
CPNE1-214ENST00000435747 EFCAB12Q6NXP0 572 aa11.66□□□□□ -0.54
CPNE1-214ENST00000435747 LILRA6Q6PI73 481 aa11.66□□□□□ -0.54
CPNE1-214ENST00000435747 TRMT1LQ7Z2T5 733 aaKnown RBP11.66□□□□□ -0.54
CPNE1-214ENST00000435747 WDR5BQ86VZ2 330 aa11.66□□□□□ -0.54
CPNE1-214ENST00000435747 NPAS3Q8IXF0 933 aa11.66□□□□□ -0.54
CPNE1-214ENST00000435747 REXO1Q8N1G1 1221 aaKnown RBP11.66□□□□□ -0.54
CPNE1-214ENST00000435747 LRRC71Q8N4P6 559 aa11.66□□□□□ -0.54
CPNE1-214ENST00000435747 NLRP7Q8WX94 980 aa11.66□□□□□ -0.54
CPNE1-214ENST00000435747 TCEAL3Q969E4 200 aa11.66□□□□□ -0.54
CPNE1-214ENST00000435747 PGBD4Q96DM1 585 aa11.66□□□□□ -0.54
CPNE1-214ENST00000435747 ZNF274Q96GC6 653 aaPredicted RBP11.66□□□□□ -0.54
CPNE1-214ENST00000435747 PLA2G2FQ9BZM2 168 aa11.66□□□□□ -0.54
CPNE1-214ENST00000435747 BRD9Q9H8M2 597 aa11.66□□□□□ -0.54
CPNE1-214ENST00000435747 C6orf50Q9HD87 102 aa11.66□□□□□ -0.54
CPNE1-214ENST00000435747 SH3GLB2Q9NR46 395 aa11.66□□□□□ -0.54
CPNE1-214ENST00000435747 FAM105AQ9NUU6 356 aa11.66□□□□□ -0.54
CPNE1-214ENST00000435747 MARCH5Q9NX47 278 aa11.66□□□□□ -0.54
CPNE1-214ENST00000435747 CEP131Q9UPN4 1083 aa11.66□□□□□ -0.54
CPNE1-214ENST00000435747 URB1O60287 2271 aaKnown RBP11.66□□□□□ -0.54
CPNE1-214ENST00000435747 DDX39AO00148 427 aaKnown RBP11.65□□□□□ -0.54
CPNE1-214ENST00000435747 IPO5O00410 1097 aaKnown RBP11.65□□□□□ -0.54
CPNE1-214ENST00000435747 CCL16O15467 120 aa11.65□□□□□ -0.54
CPNE1-214ENST00000435747 CSDE1O75534 798 aaKnown RBP11.65□□□□□ -0.54
CPNE1-214ENST00000435747 CHRNB1P11230 501 aa11.65□□□□□ -0.54
CPNE1-214ENST00000435747 GNA11P29992 359 aa11.65□□□□□ -0.54
CPNE1-214ENST00000435747 OR1G1P47890 313 aa11.65□□□□□ -0.54
CPNE1-214ENST00000435747 CCT2P78371 535 aaKnown RBP11.65□□□□□ -0.54
CPNE1-214ENST00000435747 C19orf57Q0VDD7 668 aa11.65□□□□□ -0.54
CPNE1-214ENST00000435747 PPM1LQ5SGD2 360 aa11.65□□□□□ -0.54
CPNE1-214ENST00000435747 PLA2G4DQ86XP0 818 aa11.65□□□□□ -0.54
CPNE1-214ENST00000435747 LURAP1LQ8IV03 231 aa11.65□□□□□ -0.54
CPNE1-214ENST00000435747 RNF168Q8IYW5 571 aaPredicted RBP11.65□□□□□ -0.54
CPNE1-214ENST00000435747 CCDC12Q8WUD4 166 aaPredicted RBP11.65□□□□□ -0.54
CPNE1-214ENST00000435747 GAB3Q8WWW8 586 aa11.65□□□□□ -0.54
CPNE1-214ENST00000435747 ING5Q8WYH8 240 aa11.65□□□□□ -0.54
CPNE1-214ENST00000435747 MKNK1Q9BUB5 465 aa11.65□□□□□ -0.54
CPNE1-214ENST00000435747 SLC26A6Q9BXS9 759 aa11.65□□□□□ -0.54
CPNE1-214ENST00000435747 CACNA2D2Q9NY47 1150 aa11.65□□□□□ -0.54
CPNE1-214ENST00000435747 VPS54Q9P1Q0 977 aa11.65□□□□□ -0.54
CPNE1-214ENST00000435747 FNIP2Q9P278 1114 aa11.65□□□□□ -0.54
CPNE1-214ENST00000435747 KANSL3Q9P2N6 904 aa11.65□□□□□ -0.54
CPNE1-214ENST00000435747 FBXW11Q9UKB1 542 aa11.65□□□□□ -0.54
CPNE1-214ENST00000435747 KLK13Q9UKR3 277 aa11.65□□□□□ -0.54
CPNE1-214ENST00000435747 NAP1L2Q9ULW6 460 aaPredicted RBP11.65□□□□□ -0.54
CPNE1-214ENST00000435747 PIN4Q9Y237 131 aaKnown RBP11.65□□□□□ -0.54
CPNE1-214ENST00000435747 MAFBQ9Y5Q3 323 aaPredicted RBP11.65□□□□□ -0.54
CPNE1-214ENST00000435747 CYP46A1Q9Y6A2 500 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms